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The map label for this gene is 116624602

Identifier: 116624602

GI number: 116624602

Start: 6931136

End: 6932710

Strand: Reverse

Name: 116624602

Synonym: Acid_5526

Alternate gene names: NA

Gene position: 6932710-6931136 (Counterclockwise)

Preceding gene: 116624603

Following gene: 116624601

Centisome position: 69.57

GC content: 60.32

Gene sequence:

>1575_bases
TTGAAAATTCTTCTGTACAACCCCGATAACGGCGTGACCCAAAATTTCATGCCGCACCTATGGATGTTTCTCCTGCAGTC
ACTCACTCCTTCGCAGCATGAAGTCCTACTGATCGACGGCAACACGCAACCGATGACCGACCCGGAACTGGTGCAGTATG
CGCTGGACCAGAAGATCGGGCTGGTAGGCATTGGCGCCATGACGCGGATGATCGCGAAGGCATACCGGGTGGCGGACGCG
CTGCGCGCGGCAGGGATCAAAGTGGTGATGGGCGGACCGCATGTCACCGAATGTCCGGATGAAGCGCTGGGGCGCGACGG
CGGAGGGCGGCATGCGGATGCGATTGCGCTGGGTGAGGCCGACGAGACGTGGCCGCGGATTGTAGCCGACGCCGCGAAGG
GCGAACTGCGCGAGGTGTACAAGCCGGTGGATGCTTTCGGGCAGGAACAGAAGCCGAGCCTGAAGGATTACCCGCAGATC
CCGTGGCAGAAACTGGACATCGACCAGTTCAACCGGATTCCGGGATTTTTCAAGCGCATCATGCGCCACTACGGGCATGC
GTGGGAGACCTTCCACATCATCCCGATTGAGAGCGGCCGCGGTTGTCCGTACGGCTGCGAGTTCTGCACGGTCACCGGCT
TTTTCGGCGACTCCATACGCTTCCGGACGAACGAAAGCATCGTAACCGAAATGCTGGCGCTGAAGGAACGCGCGAAGGCA
TCGAGCGGCAAGATCGCCGTCTTCTTCGTGGATGACAATTTCGCGATCAACGTGAAGCGCACGAAAAGCCTGCTGCGGGA
TATAATCGCCGCGGGGGCGCAGCTATCGTGGGTGGGGCAAATCAGCGCCAACCTGTTGCGCGACGAAGAGCTGCTGGACC
TGATTGCGGAATCGGGCGGGAAGTGGATCTTCATCGGCATGGAATCGCTGGACGTCGCCAACCTGGCGAGCGTCAACAAG
AGTTTCAACAAGCCTTCGGAGTACGCGGGAGTGCTGCAGAAGCTGGCCCAGCGCAATGTGTACGCGATTACGTCCTTTAT
TTTCGGGCTGGATAACGACACGCCGGGCGTGGCGAGCCGCACGCTGGAGCAGATACGCGATTGGCCGCCGGTGCTGCCGG
TTTTCGGGCAGATTACGCCATTTCCGGCCACGCCGTTGTACGATCGCCTGGCGAAGGAGGGGCGGCTGACGCGTCCCAAG
CACTGGCTGGAATTCGCGCCGTTCCGGATGGCGCACACTCCGCTCAAGCTCTCGATTCCCGAGGTGCAGGACGAGGTGCA
GTACGCGTGGACCAACTCGTATAGCCCGGAGGCAACGAAGCTCGCGCTGGATTCTATTGCGGATGAGCCGGTCCCGTACA
AGATCAGCCATTTTGTGGCGCGCATTTTCTTCCGCGGGATTTATTTTCCGCCGAAGGGCATGTGGCAATGGCTGAAGCTG
ATCGGGCAGAACCGTGCGTCGGTGTTCCGGATTGTGCGGGAATCTTTCACGCAGTGGCACGGCACGGATGGTGTGGCGCG
GCATAGCGATTTCAACCGTGGACCACGGTATGCTCCTGTAGCGAACGAGGAGTAG

Upstream 100 bases:

>100_bases
CTGTTAGAATAGGACCACCGACACCTCTCCTGGGCCAACCTCGACTGCACTCGTCGATCCTGCCTCAGTCCGTCTTGCCG
GAAGAAAGGCACGGAACGCA

Downstream 100 bases:

>100_bases
GGTTTCCGGGTCGTTACGCGGAAGCCGCCTGAAAGGCGGCTGCAGGCAGGATTGGCTGCCCCACAATGCGGGCCGCAAAA
AGCGATCGCTGCCTGGCGCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKILLYNPDNGVTQNFMPHLWMFLLQSLTPSQHEVLLIDGNTQPMTDPELVQYALDQKIGLVGIGAMTRMIAKAYRVADA
LRAAGIKVVMGGPHVTECPDEALGRDGGGRHADAIALGEADETWPRIVADAAKGELREVYKPVDAFGQEQKPSLKDYPQI
PWQKLDIDQFNRIPGFFKRIMRHYGHAWETFHIIPIESGRGCPYGCEFCTVTGFFGDSIRFRTNESIVTEMLALKERAKA
SSGKIAVFFVDDNFAINVKRTKSLLRDIIAAGAQLSWVGQISANLLRDEELLDLIAESGGKWIFIGMESLDVANLASVNK
SFNKPSEYAGVLQKLAQRNVYAITSFIFGLDNDTPGVASRTLEQIRDWPPVLPVFGQITPFPATPLYDRLAKEGRLTRPK
HWLEFAPFRMAHTPLKLSIPEVQDEVQYAWTNSYSPEATKLALDSIADEPVPYKISHFVARIFFRGIYFPPKGMWQWLKL
IGQNRASVFRIVRESFTQWHGTDGVARHSDFNRGPRYAPVANEE

Sequences:

>Translated_524_residues
MKILLYNPDNGVTQNFMPHLWMFLLQSLTPSQHEVLLIDGNTQPMTDPELVQYALDQKIGLVGIGAMTRMIAKAYRVADA
LRAAGIKVVMGGPHVTECPDEALGRDGGGRHADAIALGEADETWPRIVADAAKGELREVYKPVDAFGQEQKPSLKDYPQI
PWQKLDIDQFNRIPGFFKRIMRHYGHAWETFHIIPIESGRGCPYGCEFCTVTGFFGDSIRFRTNESIVTEMLALKERAKA
SSGKIAVFFVDDNFAINVKRTKSLLRDIIAAGAQLSWVGQISANLLRDEELLDLIAESGGKWIFIGMESLDVANLASVNK
SFNKPSEYAGVLQKLAQRNVYAITSFIFGLDNDTPGVASRTLEQIRDWPPVLPVFGQITPFPATPLYDRLAKEGRLTRPK
HWLEFAPFRMAHTPLKLSIPEVQDEVQYAWTNSYSPEATKLALDSIADEPVPYKISHFVARIFFRGIYFPPKGMWQWLKL
IGQNRASVFRIVRESFTQWHGTDGVARHSDFNRGPRYAPVANEE
>Mature_524_residues
MKILLYNPDNGVTQNFMPHLWMFLLQSLTPSQHEVLLIDGNTQPMTDPELVQYALDQKIGLVGIGAMTRMIAKAYRVADA
LRAAGIKVVMGGPHVTECPDEALGRDGGGRHADAIALGEADETWPRIVADAAKGELREVYKPVDAFGQEQKPSLKDYPQI
PWQKLDIDQFNRIPGFFKRIMRHYGHAWETFHIIPIESGRGCPYGCEFCTVTGFFGDSIRFRTNESIVTEMLALKERAKA
SSGKIAVFFVDDNFAINVKRTKSLLRDIIAAGAQLSWVGQISANLLRDEELLDLIAESGGKWIFIGMESLDVANLASVNK
SFNKPSEYAGVLQKLAQRNVYAITSFIFGLDNDTPGVASRTLEQIRDWPPVLPVFGQITPFPATPLYDRLAKEGRLTRPK
HWLEFAPFRMAHTPLKLSIPEVQDEVQYAWTNSYSPEATKLALDSIADEPVPYKISHFVARIFFRGIYFPPKGMWQWLKL
IGQNRASVFRIVRESFTQWHGTDGVARHSDFNRGPRYAPVANEE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 58914; Mature: 58914

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLYNPDNGVTQNFMPHLWMFLLQSLTPSQHEVLLIDGNTQPMTDPELVQYALDQKIG
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
LVGIGAMTRMIAKAYRVADALRAAGIKVVMGGPHVTECPDEALGRDGGGRHADAIALGEA
EEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEECCC
DETWPRIVADAAKGELREVYKPVDAFGQEQKPSLKDYPQIPWQKLDIDQFNRIPGFFKRI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHH
MRHYGHAWETFHIIPIESGRGCPYGCEFCTVTGFFGDSIRFRTNESIVTEMLALKERAKA
HHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCC
SSGKIAVFFVDDNFAINVKRTKSLLRDIIAAGAQLSWVGQISANLLRDEELLDLIAESGG
CCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
KWIFIGMESLDVANLASVNKSFNKPSEYAGVLQKLAQRNVYAITSFIFGLDNDTPGVASR
CEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHH
TLEQIRDWPPVLPVFGQITPFPATPLYDRLAKEGRLTRPKHWLEFAPFRMAHTPLKLSIP
HHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHCCCCEEECC
EVQDEVQYAWTNSYSPEATKLALDSIADEPVPYKISHFVARIFFRGIYFPPKGMWQWLKL
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IGQNRASVFRIVRESFTQWHGTDGVARHSDFNRGPRYAPVANEE
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKILLYNPDNGVTQNFMPHLWMFLLQSLTPSQHEVLLIDGNTQPMTDPELVQYALDQKIG
CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
LVGIGAMTRMIAKAYRVADALRAAGIKVVMGGPHVTECPDEALGRDGGGRHADAIALGEA
EEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEECCC
DETWPRIVADAAKGELREVYKPVDAFGQEQKPSLKDYPQIPWQKLDIDQFNRIPGFFKRI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHH
MRHYGHAWETFHIIPIESGRGCPYGCEFCTVTGFFGDSIRFRTNESIVTEMLALKERAKA
HHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCC
SSGKIAVFFVDDNFAINVKRTKSLLRDIIAAGAQLSWVGQISANLLRDEELLDLIAESGG
CCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
KWIFIGMESLDVANLASVNKSFNKPSEYAGVLQKLAQRNVYAITSFIFGLDNDTPGVASR
CEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHH
TLEQIRDWPPVLPVFGQITPFPATPLYDRLAKEGRLTRPKHWLEFAPFRMAHTPLKLSIP
HHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHCCCCEEECC
EVQDEVQYAWTNSYSPEATKLALDSIADEPVPYKISHFVARIFFRGIYFPPKGMWQWLKL
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IGQNRASVFRIVRESFTQWHGTDGVARHSDFNRGPRYAPVANEE
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]