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The map label for this gene is yhbO [C]

Identifier: 116624569

GI number: 116624569

Start: 6888718

End: 6889251

Strand: Reverse

Name: yhbO [C]

Synonym: Acid_5493

Alternate gene names: 116624569

Gene position: 6889251-6888718 (Counterclockwise)

Preceding gene: 116624570

Following gene: 116624567

Centisome position: 69.13

GC content: 58.99

Gene sequence:

>534_bases
ATGGATCTTTCCGGAAAAAAGATTGCAATTCTGGTGGACACGCTCTACCAGGAAATGGAAGTCTGGTATCCGCTGTTCCG
TTTTCAGGAGGCGGGCGCCACGGTAGTAACGATCGGAGCCAAAGCCGGCGAAACCTACGGCAGCAAACTCGGCTACCCGG
TCAAATCGCAACTCTCTTACGATGAGGCGCGGGCGGCGGATTTCGATGGCGTCGTGGTGCCCGGCGGCTACGCGCCGGAC
CATATTCGCCGCCACGCCAAAGCTAATCAATTCGTGCATGACATGAATGCCCAGGGCAAACTCGTGGCCTCCATCTGCCA
CGGTCCATGGGTGCTGTGCTCCGCCGGCGGAATGTTGAAAGGCCGTAAGGCGACGAGCTTCTTCGCCATTAAAGACGATG
TGGTCAATGCAGGCGCCGAGTGGTCCGATGCGGAAGTGGTGGTGGATGGCAACCTGGTCACGAGCCGCAAGCCCGAAGAC
CTTCCCGCGTTTTGCAAGGCTGCCCTTCAGGTGATGGCGAGCGTCGCGGTATAG

Upstream 100 bases:

>100_bases
CGAATACTCGCCGCGAAATCCGGCTAACGCGGAGGCGAGCCTCAAGCGCGCCATCGAGATCTTCACGGTCTGAAGGCGCC
TTCCGGGATACCATAGCGAC

Downstream 100 bases:

>100_bases
ACGTTATCCGCGGCCGATGAAGGGCATACGGGTCGCCATGACGGTCATGAACTGAACGTTGGCATCGAGCGGGAGCTGCG
CCATGTACAACACGGCATCG

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MDLSGKKIAILVDTLYQEMEVWYPLFRFQEAGATVVTIGAKAGETYGSKLGYPVKSQLSYDEARAADFDGVVVPGGYAPD
HIRRHAKANQFVHDMNAQGKLVASICHGPWVLCSAGGMLKGRKATSFFAIKDDVVNAGAEWSDAEVVVDGNLVTSRKPED
LPAFCKAALQVMASVAV

Sequences:

>Translated_177_residues
MDLSGKKIAILVDTLYQEMEVWYPLFRFQEAGATVVTIGAKAGETYGSKLGYPVKSQLSYDEARAADFDGVVVPGGYAPD
HIRRHAKANQFVHDMNAQGKLVASICHGPWVLCSAGGMLKGRKATSFFAIKDDVVNAGAEWSDAEVVVDGNLVTSRKPED
LPAFCKAALQVMASVAV
>Mature_177_residues
MDLSGKKIAILVDTLYQEMEVWYPLFRFQEAGATVVTIGAKAGETYGSKLGYPVKSQLSYDEARAADFDGVVVPGGYAPD
HIRRHAKANQFVHDMNAQGKLVASICHGPWVLCSAGGMLKGRKATSFFAIKDDVVNAGAEWSDAEVVVDGNLVTSRKPED
LPAFCKAALQVMASVAV

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=171, Percent_Identity=43.859649122807, Blast_Score=133, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19010; Mature: 19010

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSGKKIAILVDTLYQEMEVWYPLFRFQEAGATVVTIGAKAGETYGSKLGYPVKSQLSY
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCC
DEARAADFDGVVVPGGYAPDHIRRHAKANQFVHDMNAQGKLVASICHGPWVLCSAGGMLK
CHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCEEEECCCCCCC
GRKATSFFAIKDDVVNAGAEWSDAEVVVDGNLVTSRKPEDLPAFCKAALQVMASVAV
CCCCCEEEEEEHHHHCCCCCCCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLSGKKIAILVDTLYQEMEVWYPLFRFQEAGATVVTIGAKAGETYGSKLGYPVKSQLSY
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCC
DEARAADFDGVVVPGGYAPDHIRRHAKANQFVHDMNAQGKLVASICHGPWVLCSAGGMLK
CHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCEEEECCCCCCC
GRKATSFFAIKDDVVNAGAEWSDAEVVVDGNLVTSRKPEDLPAFCKAALQVMASVAV
CCCCCEEEEEEHHHHCCCCCCCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]