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The map label for this gene is fnr [C]

Identifier: 116624552

GI number: 116624552

Start: 6869320

End: 6870174

Strand: Reverse

Name: fnr [C]

Synonym: Acid_5476

Alternate gene names: 116624552

Gene position: 6870174-6869320 (Counterclockwise)

Preceding gene: 116624555

Following gene: 116624550

Centisome position: 68.94

GC content: 63.04

Gene sequence:

>855_bases
ATGGCTTGTGACCCCGAGACGCTGCGGCAGGTGCCCCTGTTTGCCCTGCTGGATGACGATGAGATTGCCGTACTTGCCGG
ACAGGTGGAAATCCGCAACTTCGCGGCCCGCCAGCGAATTTACAAGGCCGGCGATAACGGCGGGCGCGCTTACATTATGA
TCTCCGGGGCTGTCCGGGTCACCATCATCGACGAAGATCAGCAGGAGGTCCTGGTGGACGAGCCCGGGGCCGGCGAGTTC
TTCGGTTTCGCCAGCATGCTGGACCAGACCCCGCACCAGACCAGCGCTTCCGCGGTGGATGCCACCCTCTGTGTGGAAGT
GGACCGCCACGATATTATGGTGCTGCTGGAACGCAAACCCCACGCGGGCATGGACATGCTCGCAGTGCTCGGCAAGCAGT
ACCACGGCTCCCAAAAGCTGGTGCGCGTGCGTTCCACTCGGAATCCCAACGAGGTCATCGCCGAACAAACCACTTTCGGC
GAGCACATCGCGGACGCCGTGGCGCAATTCGGCGGCTCCTGGCGCTTCATCATCGCCTTCGGCGTCGTGCTGGTCGTCTA
TACCGCCGTCAACGTCACGCTCGGCAAGCAGGCTTGGGATCCCTATCCCTTCATCCTGCTGAACCTCTTCCTCTCCATGC
TCGCTTCCGTGCAGGCACCCGTGATCATGATGAGCCAGAACCGCCAGGACGCCAAGGACCGCCTGCGCGGCGAATTGGAT
TACGCCGTCAACCGGCGCGCCGAAGCCGAGATTCAGGGCCTCTCCCGCAAGCTGAACCTGCTTGGCGAAAAGATCGAGGA
CGTCGAAGAGATCGTCCGCGCCATCGATCGCCCCGGCCGCGAACCGCGACCGTGA

Upstream 100 bases:

>100_bases
TTCATTTTGACTTCCCGCGGATGAACGCACAATGAACGCGTTTTCTTATCGTGACACCCGTGCCCCATTTGTGGAATCCT
GTTGACGAGGTGAGGTGAGG

Downstream 100 bases:

>100_bases
GGGAGCGATCTCTCACTTCAAACCGCCGGTTCCCGCAGCCGGTCCAGATATGGTTTCATCGCTTCGAAGGTCTCCAAAAA
GACCGCGCGCGTCGAACCTC

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MACDPETLRQVPLFALLDDDEIAVLAGQVEIRNFAARQRIYKAGDNGGRAYIMISGAVRVTIIDEDQQEVLVDEPGAGEF
FGFASMLDQTPHQTSASAVDATLCVEVDRHDIMVLLERKPHAGMDMLAVLGKQYHGSQKLVRVRSTRNPNEVIAEQTTFG
EHIADAVAQFGGSWRFIIAFGVVLVVYTAVNVTLGKQAWDPYPFILLNLFLSMLASVQAPVIMMSQNRQDAKDRLRGELD
YAVNRRAEAEIQGLSRKLNLLGEKIEDVEEIVRAIDRPGREPRP

Sequences:

>Translated_284_residues
MACDPETLRQVPLFALLDDDEIAVLAGQVEIRNFAARQRIYKAGDNGGRAYIMISGAVRVTIIDEDQQEVLVDEPGAGEF
FGFASMLDQTPHQTSASAVDATLCVEVDRHDIMVLLERKPHAGMDMLAVLGKQYHGSQKLVRVRSTRNPNEVIAEQTTFG
EHIADAVAQFGGSWRFIIAFGVVLVVYTAVNVTLGKQAWDPYPFILLNLFLSMLASVQAPVIMMSQNRQDAKDRLRGELD
YAVNRRAEAEIQGLSRKLNLLGEKIEDVEEIVRAIDRPGREPRP
>Mature_283_residues
ACDPETLRQVPLFALLDDDEIAVLAGQVEIRNFAARQRIYKAGDNGGRAYIMISGAVRVTIIDEDQQEVLVDEPGAGEFF
GFASMLDQTPHQTSASAVDATLCVEVDRHDIMVLLERKPHAGMDMLAVLGKQYHGSQKLVRVRSTRNPNEVIAEQTTFGE
HIADAVAQFGGSWRFIIAFGVVLVVYTAVNVTLGKQAWDPYPFILLNLFLSMLASVQAPVIMMSQNRQDAKDRLRGELDY
AVNRRAEAEIQGLSRKLNLLGEKIEDVEEIVRAIDRPGREPRP

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG4420

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31548; Mature: 31416

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACDPETLRQVPLFALLDDDEIAVLAGQVEIRNFAARQRIYKAGDNGGRAYIMISGAVRV
CCCCHHHHHHCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEE
TIIDEDQQEVLVDEPGAGEFFGFASMLDQTPHQTSASAVDATLCVEVDRHDIMVLLERKP
EEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCEEEEEEECCCCEEEEEECCC
HAGMDMLAVLGKQYHGSQKLVRVRSTRNPNEVIAEQTTFGEHIADAVAQFGGSWRFIIAF
CCCHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHH
GVVLVVYTAVNVTLGKQAWDPYPFILLNLFLSMLASVQAPVIMMSQNRQDAKDRLRGELD
HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCHHH
YAVNRRAEAEIQGLSRKLNLLGEKIEDVEEIVRAIDRPGREPRP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ACDPETLRQVPLFALLDDDEIAVLAGQVEIRNFAARQRIYKAGDNGGRAYIMISGAVRV
CCCHHHHHHCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEE
TIIDEDQQEVLVDEPGAGEFFGFASMLDQTPHQTSASAVDATLCVEVDRHDIMVLLERKP
EEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHCEEEEEEECCCCEEEEEECCC
HAGMDMLAVLGKQYHGSQKLVRVRSTRNPNEVIAEQTTFGEHIADAVAQFGGSWRFIIAF
CCCHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHH
GVVLVVYTAVNVTLGKQAWDPYPFILLNLFLSMLASVQAPVIMMSQNRQDAKDRLRGELD
HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCHHH
YAVNRRAEAEIQGLSRKLNLLGEKIEDVEEIVRAIDRPGREPRP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA