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The map label for this gene is yadE [C]

Identifier: 116624495

GI number: 116624495

Start: 6785842

End: 6786804

Strand: Reverse

Name: yadE [C]

Synonym: Acid_5417

Alternate gene names: 116624495

Gene position: 6786804-6785842 (Counterclockwise)

Preceding gene: 116624497

Following gene: 116624494

Centisome position: 68.1

GC content: 64.8

Gene sequence:

>963_bases
ATGGCTGCGAGCCTCCTCAAGAAAGTCGCCAGGACCGCGTTTGATAAGGGCGGCGGCGTGGACGTGGCGCGCTGGATGAA
CCGCAAAGGTCTGCGCATCTTGATGTACCACCGCTTCCGCGATCCCGAGCCCCTGGCGCGCCAGCTGCGCCACATCCGCG
ATCACTATGCGCCGGTCTCGATGGCGCAAGTCGCGGCCTGGCTCTCTGGCGGCGAACGCCTCCCGGACAATGCGCTCGCC
ATCACGATCGACGATGGCTACCGCGATTTCTACCAGGTCGCCTACCCGGTCTTTCGCGAGTACAAAATCCCCGCCACCGT
ATACCTGGTCAGCGGATTCCTCGACCGCACGCTGTGGCTGTGGGTGGACCAGGTTCGTCACGCGTTCCTGCATGCGCCGC
CGCAAACATACCAGGCGGATTTCGTGGGAGCCTTCGAACTCGGCAGCATCGAATCGCGCAAGCGCGCGGCACACGCCGTC
GCCGAAGCAGCCAAGAAACTTCCGGATCCGGAGCGGCTGGCATTCCTCCTCCAACTGCCCCGCGAATTGCGAATCGACCT
GCCGGCCGTGGCGCCCGCCGAATACGAGCCCATGCTGTGGGAAGAAGCGCGCGAAGTGGCGGCGGGCGGCATCGAACTGG
GCGCCCACACCTGCACCCACCCCATCCTTTCACGCCTTACCTCTGCCCAACAGTTGGCCGAGGAAATCGCCGGATCGAAG
CGCCGCATCGAGGCGCAGTTGGAGCGCGCGGTCGATCACTTCTGCTATCCCAATGGCTCTACCGAGGATTTCAGCGCTGA
GGCCGTGGCGGCGGTGAAAGCCGCGCAATACCGCACTTCCGTAACCACGGAGTCGGGACTCAACTATGCGGCCGCCGATC
GCTTCCGGCTGCTGCGCATTGGCGTGGAACCCGGCCTCGATCAAGGCTACTTCCAACGCTGCGCGGCGGGCGTGGGAATC
TGA

Upstream 100 bases:

>100_bases
AACCTTCAGGAAGGTGCGCCGGCCTGCTTTATCTTGACCGTTCATGCCAGTCGTTTGAGCACGCTGCTCTGTTTAGTATC
GCCATGCGACACTAAAACCA

Downstream 100 bases:

>100_bases
GCCGCTACAATAGGGAGAGGCTTTCAGGGATCACAGCATGACGGAAGAAGAGAAAGAAAAAGCAAAAGCGACCGCGGCGG
CCGGAGTCGGCGCCGGAGTC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Protein Pda4E; Xylanase/Chitin Deacetylase; Xylanase/Chitin Deacetilase; Glycosyl Transferase Family Polysaccharide Deacetylase; Polysaccharide Deacetylase Family Protein

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAASLLKKVARTAFDKGGGVDVARWMNRKGLRILMYHRFRDPEPLARQLRHIRDHYAPVSMAQVAAWLSGGERLPDNALA
ITIDDGYRDFYQVAYPVFREYKIPATVYLVSGFLDRTLWLWVDQVRHAFLHAPPQTYQADFVGAFELGSIESRKRAAHAV
AEAAKKLPDPERLAFLLQLPRELRIDLPAVAPAEYEPMLWEEAREVAAGGIELGAHTCTHPILSRLTSAQQLAEEIAGSK
RRIEAQLERAVDHFCYPNGSTEDFSAEAVAAVKAAQYRTSVTTESGLNYAAADRFRLLRIGVEPGLDQGYFQRCAAGVGI

Sequences:

>Translated_320_residues
MAASLLKKVARTAFDKGGGVDVARWMNRKGLRILMYHRFRDPEPLARQLRHIRDHYAPVSMAQVAAWLSGGERLPDNALA
ITIDDGYRDFYQVAYPVFREYKIPATVYLVSGFLDRTLWLWVDQVRHAFLHAPPQTYQADFVGAFELGSIESRKRAAHAV
AEAAKKLPDPERLAFLLQLPRELRIDLPAVAPAEYEPMLWEEAREVAAGGIELGAHTCTHPILSRLTSAQQLAEEIAGSK
RRIEAQLERAVDHFCYPNGSTEDFSAEAVAAVKAAQYRTSVTTESGLNYAAADRFRLLRIGVEPGLDQGYFQRCAAGVGI
>Mature_319_residues
AASLLKKVARTAFDKGGGVDVARWMNRKGLRILMYHRFRDPEPLARQLRHIRDHYAPVSMAQVAAWLSGGERLPDNALAI
TIDDGYRDFYQVAYPVFREYKIPATVYLVSGFLDRTLWLWVDQVRHAFLHAPPQTYQADFVGAFELGSIESRKRAAHAVA
EAAKKLPDPERLAFLLQLPRELRIDLPAVAPAEYEPMLWEEAREVAAGGIELGAHTCTHPILSRLTSAQQLAEEIAGSKR
RIEAQLERAVDHFCYPNGSTEDFSAEAVAAVKAAQYRTSVTTESGLNYAAADRFRLLRIGVEPGLDQGYFQRCAAGVGI

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35694; Mature: 35563

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASLLKKVARTAFDKGGGVDVARWMNRKGLRILMYHRFRDPEPLARQLRHIRDHYAPVS
CHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCHH
MAQVAAWLSGGERLPDNALAITIDDGYRDFYQVAYPVFREYKIPATVYLVSGFLDRTLWL
HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WVDQVRHAFLHAPPQTYQADFVGAFELGSIESRKRAAHAVAEAAKKLPDPERLAFLLQLP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
RELRIDLPAVAPAEYEPMLWEEAREVAAGGIELGAHTCTHPILSRLTSAQQLAEEIAGSK
HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCH
RRIEAQLERAVDHFCYPNGSTEDFSAEAVAAVKAAQYRTSVTTESGLNYAAADRFRLLRI
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHEEEEEE
GVEPGLDQGYFQRCAAGVGI
CCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
AASLLKKVARTAFDKGGGVDVARWMNRKGLRILMYHRFRDPEPLARQLRHIRDHYAPVS
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCHH
MAQVAAWLSGGERLPDNALAITIDDGYRDFYQVAYPVFREYKIPATVYLVSGFLDRTLWL
HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WVDQVRHAFLHAPPQTYQADFVGAFELGSIESRKRAAHAVAEAAKKLPDPERLAFLLQLP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
RELRIDLPAVAPAEYEPMLWEEAREVAAGGIELGAHTCTHPILSRLTSAQQLAEEIAGSK
HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCH
RRIEAQLERAVDHFCYPNGSTEDFSAEAVAAVKAAQYRTSVTTESGLNYAAADRFRLLRI
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHEEEEEE
GVEPGLDQGYFQRCAAGVGI
CCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA