| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is qheDH [H]
Identifier: 116624491
GI number: 116624491
Start: 6782054
End: 6784009
Strand: Reverse
Name: qheDH [H]
Synonym: Acid_5413
Alternate gene names: 116624491
Gene position: 6784009-6782054 (Counterclockwise)
Preceding gene: 116624492
Following gene: 116624490
Centisome position: 68.07
GC content: 64.21
Gene sequence:
>1956_bases ATGCGTACTTTTGCATTCGCTGCGCTTCTCTTCACGCCTGCGCTCATGGCGCAGGACGCCGACCCCGGGAAGGTCGTCTT CGAGACCCGGTGCTCCCAATGTCATGGGTCCGATGGCAACGGCGCGGAGCGCGGGCCCGCGATCCGCAACCGCCTCGCCG CGCACGACAATACGCAGTTGGCCGCGCTCATCCGTACCGGACTTCCCGACCAGGGGATGCCCCCCGTTCCGGTGACCGAT GCCGAGATGCCATTGCTGCTGCGCTTCGTGCGCACCCTGCAGCCTCGCAACCAGCGCATCCAAGTCCGCGAGAAGGTGCA GTTAGTCGATGGCAGGACGCTCGATGGCGAGTTGCTCAATCAGGGCTTTGACGATCTGCAACTGCGCACCGACGATCATC GCGTGCATTTATTGCGCCGCTCCGGCGCGCGCTTCCGCGAAGTCACTTCGACCGTGGATTGGCCGGGTTACAACGGCGAT GCCGGCGGCAATCGCTACACCAAGCTTTCGCAGATCACCAAAGCGAATGTGGCGCGCATGGCACCCAAGTGGACTTTCAC GCTACCCAACACCGGCCGCCTGCAAGTGACGCCCGTGGTGGTAGGCGGCATCATGTATGTCTCCGGCGCCGGCGAATGCT ACGCGCTCGATGCCGGCACCGGCCGTGAGGTCTGGCATTATCGCCGGCCATCCACCCGCGGAACGCCGGGCGGCACCACC AATCGCGGTGTCGCCGTCATGGGCGATCGCGTCTTCCTGGAAACCGACAATGCCCACGTGATTGCGCTCAACCGCTTCAC CGGCGAACTGCTGTGGGACACCGAGATGGCCGACTGGCATCAGAGTTACTTCGCCACCTCGGCGCCGCTCGCCGTCGGCA GCCTCGTGATTGCCGGCACCGGCGGCGGTGAGCACGGCGCGCGCGGTTTCGTCGCGGCCTTCGATCAGGCGACGGGAAAA GAGGTCTGGCGATTCTGGACCGTGCCGCTGCCCGGCGAACCGGGCTCCGAAACCTGGCAGGGGAAGGGAATCGCCCACGG CGGCGCGCCCACCTGGTTCACCGGCACCTATGACGCCGAATCGGACACCATCTATTGGCCCACCGGCAATCCCAGCGCTG AGTACAACGGTGACGATCGCGCCGGCGACAATCTCTATTCGGATTGCATCCTTGCGCTCGATGCTCAGACCGGCAAACTG AAATGGCATTATCAGGGCACGCCGCACGATCTCTGGGATTGGGATGCCACCGAGACGCCCGTCGTGATCGACGCCAACTG GCAGGGACACCCGCGCAAACTCCTGCTTCACGCCAATCGCAACGGCTTCTTCTACGTCTTCGATCGCATCGATGGCAAAC TCCTGCTCGCCAAAGCCTTCGTCCGCAACCTGACCTGGGCCAGCGGCATTGGTGAGGACGGCCGGCCCGTCAAGCTGCCA AACCAGGAGCCGAGCGCGGCAGGCACCAAGGTCTGCCCTTCGCAGGATGGAGCCACCAACTGGTTCTCGCCTTCCTACAA TCCCGCGACCGGCCTCTACTACGTGCAGACCTTCGAGAAGTGCAGCGTGTACACCAAGAGCGATCCGGGCGTTTGGCAGG GCCTCCGCGAATACCTCGGCGGGTCCCAGCACCGCCCGCCGGGCGAGAAGCCGCAGCGCATCCTCAAGGCCATTGATATT CAGACCGGCAAGATCTCGTGGGAACTTCCCCAGCCCGGACCGGCGGAATCCTGGGGTGGTACGTTGACCACCGCCACCGG CCTCGTGATCTTCGGCGAGGAAGGCGGCGCGCTCATGGCCGCCGACGCCGTAACCGGCAAACCGCTCTGGAGTTTCCCGA CCAATCAAACCTGGAAGGCTTCACCCATGACCTACCAGTTCGATGGCGCGCAATATGTGGCCATAGCCTCGGGTTCCAAC ATCATCGCCTTTGGAGTAGACGCACCGGCGCGATGA
Upstream 100 bases:
>100_bases GTAATCGCCCCGCACTCCCGCCACTCGAATCCAGCGCCGCCCGTCGTGCCAGTCCCCTTCACCCCACCTCCGCTCGCGGT AGTATTGTGCAATATCCCCT
Downstream 100 bases:
>100_bases CCTGGCCGGGCCAAAAACGCGCACTCACCGTCTTGTATTGGATCGTGCCGTCGCTGCTATGCCTGGCCCTGCACTGGCGC GCCTTCGATTCCTGGTTTCG
Product: pyrrolo-quinoline quinone
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MRTFAFAALLFTPALMAQDADPGKVVFETRCSQCHGSDGNGAERGPAIRNRLAAHDNTQLAALIRTGLPDQGMPPVPVTD AEMPLLLRFVRTLQPRNQRIQVREKVQLVDGRTLDGELLNQGFDDLQLRTDDHRVHLLRRSGARFREVTSTVDWPGYNGD AGGNRYTKLSQITKANVARMAPKWTFTLPNTGRLQVTPVVVGGIMYVSGAGECYALDAGTGREVWHYRRPSTRGTPGGTT NRGVAVMGDRVFLETDNAHVIALNRFTGELLWDTEMADWHQSYFATSAPLAVGSLVIAGTGGGEHGARGFVAAFDQATGK EVWRFWTVPLPGEPGSETWQGKGIAHGGAPTWFTGTYDAESDTIYWPTGNPSAEYNGDDRAGDNLYSDCILALDAQTGKL KWHYQGTPHDLWDWDATETPVVIDANWQGHPRKLLLHANRNGFFYVFDRIDGKLLLAKAFVRNLTWASGIGEDGRPVKLP NQEPSAAGTKVCPSQDGATNWFSPSYNPATGLYYVQTFEKCSVYTKSDPGVWQGLREYLGGSQHRPPGEKPQRILKAIDI QTGKISWELPQPGPAESWGGTLTTATGLVIFGEEGGALMAADAVTGKPLWSFPTNQTWKASPMTYQFDGAQYVAIASGSN IIAFGVDAPAR
Sequences:
>Translated_651_residues MRTFAFAALLFTPALMAQDADPGKVVFETRCSQCHGSDGNGAERGPAIRNRLAAHDNTQLAALIRTGLPDQGMPPVPVTD AEMPLLLRFVRTLQPRNQRIQVREKVQLVDGRTLDGELLNQGFDDLQLRTDDHRVHLLRRSGARFREVTSTVDWPGYNGD AGGNRYTKLSQITKANVARMAPKWTFTLPNTGRLQVTPVVVGGIMYVSGAGECYALDAGTGREVWHYRRPSTRGTPGGTT NRGVAVMGDRVFLETDNAHVIALNRFTGELLWDTEMADWHQSYFATSAPLAVGSLVIAGTGGGEHGARGFVAAFDQATGK EVWRFWTVPLPGEPGSETWQGKGIAHGGAPTWFTGTYDAESDTIYWPTGNPSAEYNGDDRAGDNLYSDCILALDAQTGKL KWHYQGTPHDLWDWDATETPVVIDANWQGHPRKLLLHANRNGFFYVFDRIDGKLLLAKAFVRNLTWASGIGEDGRPVKLP NQEPSAAGTKVCPSQDGATNWFSPSYNPATGLYYVQTFEKCSVYTKSDPGVWQGLREYLGGSQHRPPGEKPQRILKAIDI QTGKISWELPQPGPAESWGGTLTTATGLVIFGEEGGALMAADAVTGKPLWSFPTNQTWKASPMTYQFDGAQYVAIASGSN IIAFGVDAPAR >Mature_651_residues MRTFAFAALLFTPALMAQDADPGKVVFETRCSQCHGSDGNGAERGPAIRNRLAAHDNTQLAALIRTGLPDQGMPPVPVTD AEMPLLLRFVRTLQPRNQRIQVREKVQLVDGRTLDGELLNQGFDDLQLRTDDHRVHLLRRSGARFREVTSTVDWPGYNGD AGGNRYTKLSQITKANVARMAPKWTFTLPNTGRLQVTPVVVGGIMYVSGAGECYALDAGTGREVWHYRRPSTRGTPGGTT NRGVAVMGDRVFLETDNAHVIALNRFTGELLWDTEMADWHQSYFATSAPLAVGSLVIAGTGGGEHGARGFVAAFDQATGK EVWRFWTVPLPGEPGSETWQGKGIAHGGAPTWFTGTYDAESDTIYWPTGNPSAEYNGDDRAGDNLYSDCILALDAQTGKL KWHYQGTPHDLWDWDATETPVVIDANWQGHPRKLLLHANRNGFFYVFDRIDGKLLLAKAFVRNLTWASGIGEDGRPVKLP NQEPSAAGTKVCPSQDGATNWFSPSYNPATGLYYVQTFEKCSVYTKSDPGVWQGLREYLGGSQHRPPGEKPQRILKAIDI QTGKISWELPQPGPAESWGGTLTTATGLVIFGEEGGALMAADAVTGKPLWSFPTNQTWKASPMTYQFDGAQYVAIASGSN IIAFGVDAPAR
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=345, Percent_Identity=28.695652173913, Blast_Score=130, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 71016; Mature: 71016
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFAFAALLFTPALMAQDADPGKVVFETRCSQCHGSDGNGAERGPAIRNRLAAHDNTQL CCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCE AALIRTGLPDQGMPPVPVTDAEMPLLLRFVRTLQPRNQRIQVREKVQLVDGRTLDGELLN EHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHH QGFDDLQLRTDDHRVHLLRRSGARFREVTSTVDWPGYNGDAGGNRYTKLSQITKANVARM CCCCCEEEECCCCEEEEEHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC APKWTFTLPNTGRLQVTPVVVGGIMYVSGAGECYALDAGTGREVWHYRRPSTRGTPGGTT CCCEEEECCCCCCEEEEEEEEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCCC NRGVAVMGDRVFLETDNAHVIALNRFTGELLWDTEMADWHQSYFATSAPLAVGSLVIAGT CCCEEEECCEEEEEECCEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCEEEEEEEEEC GGGEHGARGFVAAFDQATGKEVWRFWTVPLPGEPGSETWQGKGIAHGGAPTWFTGTYDAE CCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEEEEECCC SDTIYWPTGNPSAEYNGDDRAGDNLYSDCILALDAQTGKLKWHYQGTPHDLWDWDATETP CCEEEECCCCCCCCCCCCCCCCCCHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC VVIDANWQGHPRKLLLHANRNGFFYVFDRIDGKLLLAKAFVRNLTWASGIGEDGRPVKLP EEEECCCCCCCEEEEEEECCCCEEEEEECCCCEEEHHHHHHHHCCHHCCCCCCCCEEECC NQEPSAAGTKVCPSQDGATNWFSPSYNPATGLYYVQTFEKCSVYTKSDPGVWQGLREYLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCEEEECCCCHHHHHHHHHHC GSQHRPPGEKPQRILKAIDIQTGKISWELPQPGPAESWGGTLTTATGLVIFGEEGGALMA CCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECEEEEECCCCCEEEE ADAVTGKPLWSFPTNQTWKASPMTYQFDGAQYVAIASGSNIIAFGVDAPAR ECCCCCCEEECCCCCCCEECCCCEEEECCEEEEEEECCCEEEEEECCCCCC >Mature Secondary Structure MRTFAFAALLFTPALMAQDADPGKVVFETRCSQCHGSDGNGAERGPAIRNRLAAHDNTQL CCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCE AALIRTGLPDQGMPPVPVTDAEMPLLLRFVRTLQPRNQRIQVREKVQLVDGRTLDGELLN EHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHH QGFDDLQLRTDDHRVHLLRRSGARFREVTSTVDWPGYNGDAGGNRYTKLSQITKANVARM CCCCCEEEECCCCEEEEEHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC APKWTFTLPNTGRLQVTPVVVGGIMYVSGAGECYALDAGTGREVWHYRRPSTRGTPGGTT CCCEEEECCCCCCEEEEEEEEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCCC NRGVAVMGDRVFLETDNAHVIALNRFTGELLWDTEMADWHQSYFATSAPLAVGSLVIAGT CCCEEEECCEEEEEECCEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCEEEEEEEEEC GGGEHGARGFVAAFDQATGKEVWRFWTVPLPGEPGSETWQGKGIAHGGAPTWFTGTYDAE CCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEEEEECCC SDTIYWPTGNPSAEYNGDDRAGDNLYSDCILALDAQTGKLKWHYQGTPHDLWDWDATETP CCEEEECCCCCCCCCCCCCCCCCCHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC VVIDANWQGHPRKLLLHANRNGFFYVFDRIDGKLLLAKAFVRNLTWASGIGEDGRPVKLP EEEECCCCCCCEEEEEEECCCCEEEEEECCCCEEEHHHHHHHHCCHHCCCCCCCCEEECC NQEPSAAGTKVCPSQDGATNWFSPSYNPATGLYYVQTFEKCSVYTKSDPGVWQGLREYLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCEEEECCCCHHHHHHHHHHC GSQHRPPGEKPQRILKAIDIQTGKISWELPQPGPAESWGGTLTTATGLVIFGEEGGALMA CCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECEEEEECCCCCEEEE ADAVTGKPLWSFPTNQTWKASPMTYQFDGAQYVAIASGSNIIAFGVDAPAR ECCCCCCEEECCCCCCCEECCCCEEEECCEEEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]