| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624485
Identifier: 116624485
GI number: 116624485
Start: 6774228
End: 6775871
Strand: Reverse
Name: 116624485
Synonym: Acid_5407
Alternate gene names: NA
Gene position: 6775871-6774228 (Counterclockwise)
Preceding gene: 116624486
Following gene: 116624484
Centisome position: 67.99
GC content: 59.43
Gene sequence:
>1644_bases TTGATTTTGGCCGCCTTGCTCGCTGCACTGCCGGAGACAATCGGCGCTCAATCGCAGCCGGGCGGCGACGCGCCTCCACT GACTGAGCGGGAGCGCAGCCTGCTGCAGCGAATCCAGAGCCTCGAGAAGAAGATAGCCGGGTTGCGCGATGTGCAGGCCC GGCTCGCAGCCATCGAGGCCAGGCTGGGCGAAGAGCGTGCGCAGGGGACCTCTAAGGAACCAGCGGATTCGGCGGCGGTC GGCTCATACCTGCAACCCGCCGCTTTTGTCCCGGGCGGGAAAGAGGAACCCCAACCTCCGCGGGCGGCAGCGCCTGCATC GCCGAAGCCCGCTCCACAGTCTGCGGCGGCCTCTCCGCCATCCCAACCAGCCGGGGGCCAACCGCCAAGCCAGTCTTCCG CCACCACGCCGCCTGCCGCTGACGACAAAGCCAGATTCCCGGAAGCCTCCGACGGCAATCCCGCCGTTTTCGGTGAGTTC AATCCAGGCCGGGGATTCGTCGTCTCCAGGGGCCAGTACGGAGAGTTGGATCTCAGCGGTTATATGGCCGTGCGGTACCT GAACCAACTGCCGCCCGATCAATCAGCCACAGACCACCTGGGCCGTCCGTTCCCTGTAGAACCCCGCAATGACTTTCAGT TCCATCGGGTGATGTTGTTTTCCCAGGGATGGTTGTTCAGTCCGAAATTTCAATACTCCACGTTTGTCTGGACAGTGCAG GACACAAACCAGGTGGCCGTGGGCGGCGCCCTCTATTACAACTTCAGTAAATACTTCACGCTTGGAGCAGGCTGGAATGC CTATCCCGGGACCCTGTCTTTGCAGGGCTCGCATCCATATTGGGTATCTTACGATCGCGTCATGGCCGACGAATTCTTCC GGCCATACTTCTCGCAAGGAGTATTCGCCCAGGGGAACCTGCTTCGCACTCTTCAGTACCGGTGGATGGTTGGCAATAAT AACAGCAACCTCGATGTGCCGGCATCCAAGCTCGATCGCGATCTCTCGGCCGGATTTGCCATAACATGGCAGCCGACAAC GGGTGAGTTTGGGCCACGAGGCGCTTTCGGAGACTACGAGCGCCATAAGAAGCTCGCCACGCGGTTCAATTTGGCTTACA CCTACAGCCCCGAGGAGCGCCAATCACCAATCGGCACGCCTGCGAGTAACACCACGCTTCGGCTGGCGGATAGCCTTAAC GTATTCGATACCGGCGCCCTTGCTGCCGGCGTAACAGTGGAACGCGTGCGCTATCAGCTGGTCTCCGTCGCAGCGGGAAT GAAGTATCGGGGGTTCTGGCTCCAGGGCGAGGGCTACTTCCGGAAGCTGGACCATTTCATTGCTGACGGCCCACTGCCGG TCGCGGCGGTTCGAAATACGGGCTTCTATGTCCAGGCTGCCCAAATGATTGTGCCGAACAGAATCGAGCTTTACGGCTCC ACGTCCTTTGTTCTGGGAGAATTTGGGCAGCGCCCGCATGAATTCATCGGAGGCGCCAACTATTATCCGTGGAACACCCG TAACCTGCGGCTCAACCTTCAACTAATCAACGTCTCTCATTCCCCTGTTAGTAGTACCTTCGGCTTCTATACAGGCCAAA TCACCGGTAAAGTCTTAACCCTCGGCTTTACGGCATTTTACTGA
Upstream 100 bases:
>100_bases TCCCCCAAATCCGTAGGGTTGAAGTAGCCGCGCCTTAACCGGAAGGCCCATGATCTCTCGCCGTGAAAGATCGCGCAGTT CGATGGAGCTTCTTCGCGGA
Downstream 100 bases:
>100_bases GTCGCTATGAGAGAGGAAGCTGCCTTATCCTGGCTCGCCGCATCCTTACAGAACCACCCCGAGATCGTCCTTTTTATGGT GATTGGGGTCGGCCACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MILAALLAALPETIGAQSQPGGDAPPLTERERSLLQRIQSLEKKIAGLRDVQARLAAIEARLGEERAQGTSKEPADSAAV GSYLQPAAFVPGGKEEPQPPRAAAPASPKPAPQSAAASPPSQPAGGQPPSQSSATTPPAADDKARFPEASDGNPAVFGEF NPGRGFVVSRGQYGELDLSGYMAVRYLNQLPPDQSATDHLGRPFPVEPRNDFQFHRVMLFSQGWLFSPKFQYSTFVWTVQ DTNQVAVGGALYYNFSKYFTLGAGWNAYPGTLSLQGSHPYWVSYDRVMADEFFRPYFSQGVFAQGNLLRTLQYRWMVGNN NSNLDVPASKLDRDLSAGFAITWQPTTGEFGPRGAFGDYERHKKLATRFNLAYTYSPEERQSPIGTPASNTTLRLADSLN VFDTGALAAGVTVERVRYQLVSVAAGMKYRGFWLQGEGYFRKLDHFIADGPLPVAAVRNTGFYVQAAQMIVPNRIELYGS TSFVLGEFGQRPHEFIGGANYYPWNTRNLRLNLQLINVSHSPVSSTFGFYTGQITGKVLTLGFTAFY
Sequences:
>Translated_547_residues MILAALLAALPETIGAQSQPGGDAPPLTERERSLLQRIQSLEKKIAGLRDVQARLAAIEARLGEERAQGTSKEPADSAAV GSYLQPAAFVPGGKEEPQPPRAAAPASPKPAPQSAAASPPSQPAGGQPPSQSSATTPPAADDKARFPEASDGNPAVFGEF NPGRGFVVSRGQYGELDLSGYMAVRYLNQLPPDQSATDHLGRPFPVEPRNDFQFHRVMLFSQGWLFSPKFQYSTFVWTVQ DTNQVAVGGALYYNFSKYFTLGAGWNAYPGTLSLQGSHPYWVSYDRVMADEFFRPYFSQGVFAQGNLLRTLQYRWMVGNN NSNLDVPASKLDRDLSAGFAITWQPTTGEFGPRGAFGDYERHKKLATRFNLAYTYSPEERQSPIGTPASNTTLRLADSLN VFDTGALAAGVTVERVRYQLVSVAAGMKYRGFWLQGEGYFRKLDHFIADGPLPVAAVRNTGFYVQAAQMIVPNRIELYGS TSFVLGEFGQRPHEFIGGANYYPWNTRNLRLNLQLINVSHSPVSSTFGFYTGQITGKVLTLGFTAFY >Mature_547_residues MILAALLAALPETIGAQSQPGGDAPPLTERERSLLQRIQSLEKKIAGLRDVQARLAAIEARLGEERAQGTSKEPADSAAV GSYLQPAAFVPGGKEEPQPPRAAAPASPKPAPQSAAASPPSQPAGGQPPSQSSATTPPAADDKARFPEASDGNPAVFGEF NPGRGFVVSRGQYGELDLSGYMAVRYLNQLPPDQSATDHLGRPFPVEPRNDFQFHRVMLFSQGWLFSPKFQYSTFVWTVQ DTNQVAVGGALYYNFSKYFTLGAGWNAYPGTLSLQGSHPYWVSYDRVMADEFFRPYFSQGVFAQGNLLRTLQYRWMVGNN NSNLDVPASKLDRDLSAGFAITWQPTTGEFGPRGAFGDYERHKKLATRFNLAYTYSPEERQSPIGTPASNTTLRLADSLN VFDTGALAAGVTVERVRYQLVSVAAGMKYRGFWLQGEGYFRKLDHFIADGPLPVAAVRNTGFYVQAAQMIVPNRIELYGS TSFVLGEFGQRPHEFIGGANYYPWNTRNLRLNLQLINVSHSPVSSTFGFYTGQITGKVLTLGFTAFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59822; Mature: 59822
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILAALLAALPETIGAQSQPGGDAPPLTERERSLLQRIQSLEKKIAGLRDVQARLAAIEA CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGEERAQGTSKEPADSAAVGSYLQPAAFVPGGKEEPQPPRAAAPASPKPAPQSAAASPP HHHHHHHCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQPAGGQPPSQSSATTPPAADDKARFPEASDGNPAVFGEFNPGRGFVVSRGQYGELDLSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHH YMAVRYLNQLPPDQSATDHLGRPFPVEPRNDFQFHRVMLFSQGWLFSPKFQYSTFVWTVQ HHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCCEEEEEEEE DTNQVAVGGALYYNFSKYFTLGAGWNAYPGTLSLQGSHPYWVSYDRVMADEFFRPYFSQG CCCEEEECEEEEEECCCEEEECCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHCC VFAQGNLLRTLQYRWMVGNNNSNLDVPASKLDRDLSAGFAITWQPTTGEFGPRGAFGDYE CCCCCCEEEEEEEEEEECCCCCCCCCCHHHHCHHHHCCEEEEEECCCCCCCCCCCCCCHH RHKKLATRFNLAYTYSPEERQSPIGTPASNTTLRLADSLNVFDTGALAAGVTVERVRYQL HHHHHHHHEEEEEEECCHHHCCCCCCCCCCCEEEEECCCCEEECCCHHCCCHHHHHHHHH VSVAAGMKYRGFWLQGEGYFRKLDHFIADGPLPVAAVRNTGFYVQAAQMIVPNRIELYGS HHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCEEEEECC TSFVLGEFGQRPHEFIGGANYYPWNTRNLRLNLQLINVSHSPVSSTFGFYTGQITGKVLT CHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCHHHCCEEEEEECCEEEE LGFTAFY EEEEECC >Mature Secondary Structure MILAALLAALPETIGAQSQPGGDAPPLTERERSLLQRIQSLEKKIAGLRDVQARLAAIEA CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGEERAQGTSKEPADSAAVGSYLQPAAFVPGGKEEPQPPRAAAPASPKPAPQSAAASPP HHHHHHHCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQPAGGQPPSQSSATTPPAADDKARFPEASDGNPAVFGEFNPGRGFVVSRGQYGELDLSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHH YMAVRYLNQLPPDQSATDHLGRPFPVEPRNDFQFHRVMLFSQGWLFSPKFQYSTFVWTVQ HHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCCEEEEEEEE DTNQVAVGGALYYNFSKYFTLGAGWNAYPGTLSLQGSHPYWVSYDRVMADEFFRPYFSQG CCCEEEECEEEEEECCCEEEECCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHCC VFAQGNLLRTLQYRWMVGNNNSNLDVPASKLDRDLSAGFAITWQPTTGEFGPRGAFGDYE CCCCCCEEEEEEEEEEECCCCCCCCCCHHHHCHHHHCCEEEEEECCCCCCCCCCCCCCHH RHKKLATRFNLAYTYSPEERQSPIGTPASNTTLRLADSLNVFDTGALAAGVTVERVRYQL HHHHHHHHEEEEEEECCHHHCCCCCCCCCCCEEEEECCCCEEECCCHHCCCHHHHHHHHH VSVAAGMKYRGFWLQGEGYFRKLDHFIADGPLPVAAVRNTGFYVQAAQMIVPNRIELYGS HHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCEEEEECC TSFVLGEFGQRPHEFIGGANYYPWNTRNLRLNLQLINVSHSPVSSTFGFYTGQITGKVLT CHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCHHHCCEEEEEECCEEEE LGFTAFY EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA