| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624478
Identifier: 116624478
GI number: 116624478
Start: 6766458
End: 6767240
Strand: Direct
Name: 116624478
Synonym: Acid_5400
Alternate gene names: NA
Gene position: 6766458-6767240 (Clockwise)
Preceding gene: 116624474
Following gene: 116624479
Centisome position: 67.9
GC content: 62.71
Gene sequence:
>783_bases ATGAGTTATCTGGGCAGAAGAGTTCAAAGAAACCTGGTCAAGCCGGAGAAGCAACAAGATGTGGGCGTAGCGGAGTGGGC CAGGAGAGCGTTGGGATTCGAAGCGGATGCCGCGCAGGCGCGAGTGTTAGACACGCGCAGCAAGAGGGTGCTGTTGAATT GCACGCGTCAGTGGGGCAAATCGACAGTGACGGCCGCGCGGGCGGTACACGAAGCGGTGAAGAATGCGGGCAGCCTGACG ATCGCGGTGACCCCGACAGCGCGGCAGACCGGAGAGTTTGTGCGCAAGGCGGCGACATTCGCGAGCGGGCTGGAGATGAG AGTGAAGGGCGACGGGCATAACGAGATGTCACTGGCCTTTCCGAACGGATCGCGAATCGTGGGATTGCCGGGGACGGAGG CGACGGTGCGCGGGTTCTCGGCGGTGACGCTGTTGTTAATAGACGAGGCGTCGCGGGTGGGGGACGACTTATATATGGCG ATGCGGCCGATGCTGGCGGTGAGCGCGGGAACGCTGTGGCTGATGAGCACGCCGCACGGGAAGCGGGGATTCTTTTACGA GGCGTGGGCGAACGGCGGCGAGACGTGGGAGCGGGTAAGCGTAAAGGCGGAGGATTGCCCACGATTCAAGGCGGAATACC TGGAGGAGGAGCGGCAGGTGATGGGGGAGCGGATCTACCGGCAGGAGTACTGCTGCGAATTCGGCGAAACGTCGGGCGCG GTGTTCGACCGGGACCTGATCGAGGCGGCGTTTTCGGATGAGGTCACTCCGCTGGATTTGTGA
Upstream 100 bases:
>100_bases TCTGATTCGGAAAATTCCTTAAAAAAATGTGCCGTACAGGCCCTTTATATCGGAGTTTTGTATCCGTTTTCCGGGAGGGT GGGAGTAGATTGGGACTGAG
Downstream 100 bases:
>100_bases AGGTGAGTTAGCTCGTGGGATTACACGGCGCTGAGTGCGGTTAAGGCAACGGGTTCGTGAAGGACAATGCTTCAATGAGC CGAATACGCCGTGCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSYLGRRVQRNLVKPEKQQDVGVAEWARRALGFEADAAQARVLDTRSKRVLLNCTRQWGKSTVTAARAVHEAVKNAGSLT IAVTPTARQTGEFVRKAATFASGLEMRVKGDGHNEMSLAFPNGSRIVGLPGTEATVRGFSAVTLLLIDEASRVGDDLYMA MRPMLAVSAGTLWLMSTPHGKRGFFYEAWANGGETWERVSVKAEDCPRFKAEYLEEERQVMGERIYRQEYCCEFGETSGA VFDRDLIEAAFSDEVTPLDL
Sequences:
>Translated_260_residues MSYLGRRVQRNLVKPEKQQDVGVAEWARRALGFEADAAQARVLDTRSKRVLLNCTRQWGKSTVTAARAVHEAVKNAGSLT IAVTPTARQTGEFVRKAATFASGLEMRVKGDGHNEMSLAFPNGSRIVGLPGTEATVRGFSAVTLLLIDEASRVGDDLYMA MRPMLAVSAGTLWLMSTPHGKRGFFYEAWANGGETWERVSVKAEDCPRFKAEYLEEERQVMGERIYRQEYCCEFGETSGA VFDRDLIEAAFSDEVTPLDL >Mature_259_residues SYLGRRVQRNLVKPEKQQDVGVAEWARRALGFEADAAQARVLDTRSKRVLLNCTRQWGKSTVTAARAVHEAVKNAGSLTI AVTPTARQTGEFVRKAATFASGLEMRVKGDGHNEMSLAFPNGSRIVGLPGTEATVRGFSAVTLLLIDEASRVGDDLYMAM RPMLAVSAGTLWLMSTPHGKRGFFYEAWANGGETWERVSVKAEDCPRFKAEYLEEERQVMGERIYRQEYCCEFGETSGAV FDRDLIEAAFSDEVTPLDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28808; Mature: 28677
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLGRRVQRNLVKPEKQQDVGVAEWARRALGFEADAAQARVLDTRSKRVLLNCTRQWGK CCHHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCH STVTAARAVHEAVKNAGSLTIAVTPTARQTGEFVRKAATFASGLEMRVKGDGHNEMSLAF HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEC PNGSRIVGLPGTEATVRGFSAVTLLLIDEASRVGDDLYMAMRPMLAVSAGTLWLMSTPHG CCCCEEEECCCCCHHHCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC KRGFFYEAWANGGETWERVSVKAEDCPRFKAEYLEEERQVMGERIYRQEYCCEFGETSGA CCCCEEEECCCCCCCHHHEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VFDRDLIEAAFSDEVTPLDL HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SYLGRRVQRNLVKPEKQQDVGVAEWARRALGFEADAAQARVLDTRSKRVLLNCTRQWGK CHHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCH STVTAARAVHEAVKNAGSLTIAVTPTARQTGEFVRKAATFASGLEMRVKGDGHNEMSLAF HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEC PNGSRIVGLPGTEATVRGFSAVTLLLIDEASRVGDDLYMAMRPMLAVSAGTLWLMSTPHG CCCCEEEECCCCCHHHCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC KRGFFYEAWANGGETWERVSVKAEDCPRFKAEYLEEERQVMGERIYRQEYCCEFGETSGA CCCCEEEECCCCCCCHHHEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VFDRDLIEAAFSDEVTPLDL HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA