| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624418
Identifier: 116624418
GI number: 116624418
Start: 6696882
End: 6698579
Strand: Direct
Name: 116624418
Synonym: Acid_5340
Alternate gene names: NA
Gene position: 6696882-6698579 (Clockwise)
Preceding gene: 116624417
Following gene: 116624419
Centisome position: 67.2
GC content: 62.01
Gene sequence:
>1698_bases ATGGGCGCTTTCCGGCTGCTGGTGAAACACTTTTTCGGCCGCTTCTTCGATAACGAGATCGTCTCGCAGACGGGCGATAT GCGCACGAACGTAGTGCAGGCCTTCGGGCTGGTGGCAACGCCGGGAATCTTCGTGCCGTTCTATATGATCCCGCAGAGGG CGCGATTCGACCACCCATTCGCCCATAACTGGATCCTGTTAAGCGACTACTACTTTTTCATCCTGTTCTCCATGGTCGTT ATGGGCTTCGTCATGGTGTTTGAGTGGGACGCGATTTTTCCCGACCGCAAGGACTACCTGATTCTGACGCCGCTGCCGCT TGGCGGCACGTCGATCTTCGCGGCCAAAACGCTGGCGCTGATCGCCTTCCTCGGGATCTTTGCGATCGATGCGAACCTCT TCTGCACGTTTCTCGCTCCGCTAACCACTGGGGGCGAAGGCACGGCGGCGCCGGTAGTGTGGAGACTGATCGCGATTCAC GGCGTGAGCGTGATGGCGGCGGGGATCTTTGTGGCACTGTCGATAGCGAGCGTGCAGGGAGTCTTGATCAACCTGCTGAC GGGCGCCGGATTCCGGCGGGTTTCCCCGTGGGTGCAGATGGCGCTAATGGGCACGCTGATCGTGATGCTGTTCCTGACGC CGCTGGCTTGCGCCAGCATCCGGACGCTGGTGGAGCGCGATAGCGCGCTGCTGCGCTGGTTCCCGCCGTTCTGGTTCCTG GGCATGTATCTCGACATGCTGCCGGGGCAACCGGCGGGGCCGCGGTTCCACGAGCTTGCCATCATGGCAAGACAGGCGCT TGCGATTTCGGCCGGGGCCTTCGCGGTGACTTACCTGGCCGGCTATCATCGCCATGCGCGGAGGGTGATGGAGAGTGTGG AAAGCACGCTGGGAGGCCCGGGCAGGCTGCGCGCGGGATTCGACGGGCTGGTCAACCGCCGGCTGCTGCCGCATCCGCTG GAACGGGCGACCTTTCACTTCATCAGCAACACGATGCTGCGAACGGCACGCCAGCGGCTGTTCCTGGCGGCCTTCGGCGG CGTGGCGGTGGCGCTCACCCTACCGGCGCTGCTCAGGGTCGGGACGCGGCCGGGGATGCCGATTCTGCTCTTCGAAGCGG CGGGTCTGCTCTCGGCGCCGCTTACGCTTTCGTTCTTCGTTGTCTCCGGGCTGCGCGCGGCCTTCAATTTCCCGGCTGAG CTGCGCGCCAACTGGGTCTTCCAGATCTGCGAGAGCGAAGACCGCGTACTGCATATTCGCGCCGCACGGAAATGGATCGC GCTAATGGGGATCGTGCCGCTTTTCGTATTGCTGACGCCGGTGGAGATCTGGTTTCGGGGCTGGCGCCTGGCATTCATAC ACCTGACATTCGCGATCGGGTTGTCGCTGGTGCTGCTCAACCTATTGCTCGTGTGGTTCCGGAAAATCCCGTTCACGTGC TCTTACTTTCCGGGGAAGACGAGCATGGCAGTGATGGCGGCATTGTATCTGGCCGGCTTCACCACTTACAGCTGGAGCGG CGCCGACCTCGAAGGACGGATGATCGGGTCTCCGGCACTGCTGATTTTCTTTTACGCGGCGATCGGAGCGGCGTTGTATG GCTTATCCCGGCTGGAGATTCGGGAATTGGGCGTGGACGACGCTTTGATTTATGAAGACGAGCCCGACCCGATCGTGCGA TCGCTGGAATTGGGGTAA
Upstream 100 bases:
>100_bases TGCATCTTCCCTCGCTCGAGCAGATCTTCCGCCAGCTGGCCAAACAAGAGGACGTGGGAGCTTCGGCGCGCGAGATTGTC GCGGTCATGCGGGGTGCGTG
Downstream 100 bases:
>100_bases TGATCGAGCGACCGCTCCCTTATAGTTACTCCGTGAGGAGAAATATGGTTTAAGGTTTTCCACAGCCGCCGAAACCGGCG AGCCTGTGGAAAAGGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MGAFRLLVKHFFGRFFDNEIVSQTGDMRTNVVQAFGLVATPGIFVPFYMIPQRARFDHPFAHNWILLSDYYFFILFSMVV MGFVMVFEWDAIFPDRKDYLILTPLPLGGTSIFAAKTLALIAFLGIFAIDANLFCTFLAPLTTGGEGTAAPVVWRLIAIH GVSVMAAGIFVALSIASVQGVLINLLTGAGFRRVSPWVQMALMGTLIVMLFLTPLACASIRTLVERDSALLRWFPPFWFL GMYLDMLPGQPAGPRFHELAIMARQALAISAGAFAVTYLAGYHRHARRVMESVESTLGGPGRLRAGFDGLVNRRLLPHPL ERATFHFISNTMLRTARQRLFLAAFGGVAVALTLPALLRVGTRPGMPILLFEAAGLLSAPLTLSFFVVSGLRAAFNFPAE LRANWVFQICESEDRVLHIRAARKWIALMGIVPLFVLLTPVEIWFRGWRLAFIHLTFAIGLSLVLLNLLLVWFRKIPFTC SYFPGKTSMAVMAALYLAGFTTYSWSGADLEGRMIGSPALLIFFYAAIGAALYGLSRLEIRELGVDDALIYEDEPDPIVR SLELG
Sequences:
>Translated_565_residues MGAFRLLVKHFFGRFFDNEIVSQTGDMRTNVVQAFGLVATPGIFVPFYMIPQRARFDHPFAHNWILLSDYYFFILFSMVV MGFVMVFEWDAIFPDRKDYLILTPLPLGGTSIFAAKTLALIAFLGIFAIDANLFCTFLAPLTTGGEGTAAPVVWRLIAIH GVSVMAAGIFVALSIASVQGVLINLLTGAGFRRVSPWVQMALMGTLIVMLFLTPLACASIRTLVERDSALLRWFPPFWFL GMYLDMLPGQPAGPRFHELAIMARQALAISAGAFAVTYLAGYHRHARRVMESVESTLGGPGRLRAGFDGLVNRRLLPHPL ERATFHFISNTMLRTARQRLFLAAFGGVAVALTLPALLRVGTRPGMPILLFEAAGLLSAPLTLSFFVVSGLRAAFNFPAE LRANWVFQICESEDRVLHIRAARKWIALMGIVPLFVLLTPVEIWFRGWRLAFIHLTFAIGLSLVLLNLLLVWFRKIPFTC SYFPGKTSMAVMAALYLAGFTTYSWSGADLEGRMIGSPALLIFFYAAIGAALYGLSRLEIRELGVDDALIYEDEPDPIVR SLELG >Mature_564_residues GAFRLLVKHFFGRFFDNEIVSQTGDMRTNVVQAFGLVATPGIFVPFYMIPQRARFDHPFAHNWILLSDYYFFILFSMVVM GFVMVFEWDAIFPDRKDYLILTPLPLGGTSIFAAKTLALIAFLGIFAIDANLFCTFLAPLTTGGEGTAAPVVWRLIAIHG VSVMAAGIFVALSIASVQGVLINLLTGAGFRRVSPWVQMALMGTLIVMLFLTPLACASIRTLVERDSALLRWFPPFWFLG MYLDMLPGQPAGPRFHELAIMARQALAISAGAFAVTYLAGYHRHARRVMESVESTLGGPGRLRAGFDGLVNRRLLPHPLE RATFHFISNTMLRTARQRLFLAAFGGVAVALTLPALLRVGTRPGMPILLFEAAGLLSAPLTLSFFVVSGLRAAFNFPAEL RANWVFQICESEDRVLHIRAARKWIALMGIVPLFVLLTPVEIWFRGWRLAFIHLTFAIGLSLVLLNLLLVWFRKIPFTCS YFPGKTSMAVMAALYLAGFTTYSWSGADLEGRMIGSPALLIFFYAAIGAALYGLSRLEIRELGVDDALIYEDEPDPIVRS LELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62582; Mature: 62451
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAFRLLVKHFFGRFFDNEIVSQTGDMRTNVVQAFGLVATPGIFVPFYMIPQRARFDHPF CCHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC AHNWILLSDYYFFILFSMVVMGFVMVFEWDAIFPDRKDYLILTPLPLGGTSIFAAKTLAL CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH IAFLGIFAIDANLFCTFLAPLTTGGEGTAAPVVWRLIAIHGVSVMAAGIFVALSIASVQG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLINLLTGAGFRRVSPWVQMALMGTLIVMLFLTPLACASIRTLVERDSALLRWFPPFWFL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH GMYLDMLPGQPAGPRFHELAIMARQALAISAGAFAVTYLAGYHRHARRVMESVESTLGGP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRLRAGFDGLVNRRLLPHPLERATFHFISNTMLRTARQRLFLAAFGGVAVALTLPALLRV CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTRPGMPILLFEAAGLLSAPLTLSFFVVSGLRAAFNFPAELRANWVFQICESEDRVLHIR CCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCEEEHH AARKWIALMGIVPLFVLLTPVEIWFRGWRLAFIHLTFAIGLSLVLLNLLLVWFRKIPFTC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE SYFPGKTSMAVMAALYLAGFTTYSWSGADLEGRMIGSPALLIFFYAAIGAALYGLSRLEI ECCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH RELGVDDALIYEDEPDPIVRSLELG HHCCCCCEEEECCCCCHHHHHCCCC >Mature Secondary Structure GAFRLLVKHFFGRFFDNEIVSQTGDMRTNVVQAFGLVATPGIFVPFYMIPQRARFDHPF CHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC AHNWILLSDYYFFILFSMVVMGFVMVFEWDAIFPDRKDYLILTPLPLGGTSIFAAKTLAL CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH IAFLGIFAIDANLFCTFLAPLTTGGEGTAAPVVWRLIAIHGVSVMAAGIFVALSIASVQG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLINLLTGAGFRRVSPWVQMALMGTLIVMLFLTPLACASIRTLVERDSALLRWFPPFWFL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH GMYLDMLPGQPAGPRFHELAIMARQALAISAGAFAVTYLAGYHRHARRVMESVESTLGGP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRLRAGFDGLVNRRLLPHPLERATFHFISNTMLRTARQRLFLAAFGGVAVALTLPALLRV CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTRPGMPILLFEAAGLLSAPLTLSFFVVSGLRAAFNFPAELRANWVFQICESEDRVLHIR CCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCEEEHH AARKWIALMGIVPLFVLLTPVEIWFRGWRLAFIHLTFAIGLSLVLLNLLLVWFRKIPFTC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE SYFPGKTSMAVMAALYLAGFTTYSWSGADLEGRMIGSPALLIFFYAAIGAALYGLSRLEI ECCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH RELGVDDALIYEDEPDPIVRSLELG HHCCCCCEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA