| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624365
Identifier: 116624365
GI number: 116624365
Start: 6625520
End: 6627277
Strand: Direct
Name: 116624365
Synonym: Acid_5286
Alternate gene names: NA
Gene position: 6625520-6627277 (Clockwise)
Preceding gene: 116624362
Following gene: 116624368
Centisome position: 66.48
GC content: 64.62
Gene sequence:
>1758_bases ATGGAAGATTCCGCGGGTGTTGCGCCCGGCCCCGAACCCATCGTTGACGGCAACTGGCTCATCACCGAAATACCTGGTAA GCCGGTCATCGTCCGTTTCAGCCTCGATTTCGTGATGCGTCTGGGTATGGCCGTCCGTGAAGGCTTCAAGGCACTTCCAC GGCGGGGTCTCGAAACTGGCGGGTTGCTTGTCGGCGCCACGCACAAAGACCGCGGGCGGCTGGTTATCGACGTGCGCGAT TTCGAACCCGTGGAATCGGAACACGCCACAGGCCCTTCGTACATGCTCTCGGATCTCGATCGCCGTCTGCTCGAATCCAG AATCGCCGCCCGGCAGGCAGGCAAAAAGGGAAACACGGTCATCGGCTTCTATCGCAGTCACACGCGCCGGAATTTCGCCG TGACCATGGAAGACGCCGCACTCTTCTCTACCTATTTCCGTAAACCCCTGGACCTCTTCCTGCTGATCAAGTCCAATGAC GGCGCCCCACCCACCTGCGGTCTCCTGCTGCGTGAAAGCGGGAAGGAGCTTTCCGGCAGCCCCTGCGTGCAATTCCCGTT TGATGCCTATATCTTCCCGATGCCGCCGCGCGAACTCCCCGAAGCCGATCCCCAGCCCCGGACCGAAGCCCTGGTGCCTC TTCCCCCTCCAGCCTCCACCGTAAGCCCGAATCCGGCTCCGCCTTCCGCCGCGCCTTCGAACCTCGTACTCTGGAATCCC GCAGGCCTGAAGCAACTTCTGGCTCGCTGGCCCGCCTGGATTGCGATCGCCGCCGGCGTGGTCCTTGCCATCGCCATACC GGTAGGCACACACCCTGCCTATCCGCTGCGTTCGCTTGGCTTGAATGTCGCGAACACCGGCGGTAACCTCCGGCTGTCCT GGAACCATGAAGCCTCGCGCCGCGCCGCCCGCGCCATCCTGTTCATCCGGGACGGTGCGGATGAGCACCGCTTCGAACTC GATTCGCACCAACTGAACGAAGGCAGCATCTCTTACTGGCCCGCTAGCCAGGACGTAAACTTCCGCCTGGAGTGGACCTC GCCTTCCGGTACGCTCACTGAGTCCCTCCGCGCCATCGGCGCGCCGGCGCAGGCCGCACTTCCACCCGCTCCTCTTCCCC CGATCGCAACCGCACCCGCCGTTCCCGCGGCCACAACTCCGCCAATTTCTGCCGGCGAACCTCCAGTCGAACGGCAGCGC GCCGCCAATACCGGTCCGGCCTCTCGCCAGGTCTCCCGCGCCTTCACTGCGCCCGCTTCCCCGCCCGTTGCGCCTCCGGT CGCCCGCGCCGCATTACCGGAACCCCCGGTGCTCCAACCCGCAATCCCCGCCGTCCACGGCAGAGATCTTCTGCAGGCCA TAGTGCCCGCTCCAGACCCAAACCTCGGCGCCATCGCCGACACTACCTATCACGTTGAAGTCCAACCCGTGCAGCGCCGC GGACGTAGTATTCCGCTCATCGGCAAGCGCTCGCTGCGCGCCGAATATGTTCCTCCCGCCCCTCTTCACCAATCCGTGAT CCCGAATGTCCCCCGGCGTGACGTAGCGCGCACCATCGATGTAAAGGTATACGTCAACCCTGCCGGCAAAGTGGATTATG CGGAGCTGCTCTCGAGGGTCTCGAAGGCCGATGTCGATCTCGCCTCCACGCTCGTCTTCTCCGCCCGCCGCTGGGAATTC GTCCCCGCCCGCGACGGCGCCGACCCCGCCACAGGCGAAGTGATCCTCCACTACCGGTTCGGCCCCGCGAACCCTTAG
Upstream 100 bases:
>100_bases GTTCCAATTCCCGAGTGTTAGGGGCTTCACCTGTATCCCTCTGCACCACATTAGGGCACCCGGTTTCGCGTGATAAGATT CCCCCGAAGGTAGCGTCCAC
Downstream 100 bases:
>100_bases CCGACGAGCCGCGACCGTAAGTAAGGGAGCGATCTACACTTCTACCTCGCAGGTTTCTCCACCGCCTTCACTTTGCCGTC CTGCACGGTGACCTGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MEDSAGVAPGPEPIVDGNWLITEIPGKPVIVRFSLDFVMRLGMAVREGFKALPRRGLETGGLLVGATHKDRGRLVIDVRD FEPVESEHATGPSYMLSDLDRRLLESRIAARQAGKKGNTVIGFYRSHTRRNFAVTMEDAALFSTYFRKPLDLFLLIKSND GAPPTCGLLLRESGKELSGSPCVQFPFDAYIFPMPPRELPEADPQPRTEALVPLPPPASTVSPNPAPPSAAPSNLVLWNP AGLKQLLARWPAWIAIAAGVVLAIAIPVGTHPAYPLRSLGLNVANTGGNLRLSWNHEASRRAARAILFIRDGADEHRFEL DSHQLNEGSISYWPASQDVNFRLEWTSPSGTLTESLRAIGAPAQAALPPAPLPPIATAPAVPAATTPPISAGEPPVERQR AANTGPASRQVSRAFTAPASPPVAPPVARAALPEPPVLQPAIPAVHGRDLLQAIVPAPDPNLGAIADTTYHVEVQPVQRR GRSIPLIGKRSLRAEYVPPAPLHQSVIPNVPRRDVARTIDVKVYVNPAGKVDYAELLSRVSKADVDLASTLVFSARRWEF VPARDGADPATGEVILHYRFGPANP
Sequences:
>Translated_585_residues MEDSAGVAPGPEPIVDGNWLITEIPGKPVIVRFSLDFVMRLGMAVREGFKALPRRGLETGGLLVGATHKDRGRLVIDVRD FEPVESEHATGPSYMLSDLDRRLLESRIAARQAGKKGNTVIGFYRSHTRRNFAVTMEDAALFSTYFRKPLDLFLLIKSND GAPPTCGLLLRESGKELSGSPCVQFPFDAYIFPMPPRELPEADPQPRTEALVPLPPPASTVSPNPAPPSAAPSNLVLWNP AGLKQLLARWPAWIAIAAGVVLAIAIPVGTHPAYPLRSLGLNVANTGGNLRLSWNHEASRRAARAILFIRDGADEHRFEL DSHQLNEGSISYWPASQDVNFRLEWTSPSGTLTESLRAIGAPAQAALPPAPLPPIATAPAVPAATTPPISAGEPPVERQR AANTGPASRQVSRAFTAPASPPVAPPVARAALPEPPVLQPAIPAVHGRDLLQAIVPAPDPNLGAIADTTYHVEVQPVQRR GRSIPLIGKRSLRAEYVPPAPLHQSVIPNVPRRDVARTIDVKVYVNPAGKVDYAELLSRVSKADVDLASTLVFSARRWEF VPARDGADPATGEVILHYRFGPANP >Mature_585_residues MEDSAGVAPGPEPIVDGNWLITEIPGKPVIVRFSLDFVMRLGMAVREGFKALPRRGLETGGLLVGATHKDRGRLVIDVRD FEPVESEHATGPSYMLSDLDRRLLESRIAARQAGKKGNTVIGFYRSHTRRNFAVTMEDAALFSTYFRKPLDLFLLIKSND GAPPTCGLLLRESGKELSGSPCVQFPFDAYIFPMPPRELPEADPQPRTEALVPLPPPASTVSPNPAPPSAAPSNLVLWNP AGLKQLLARWPAWIAIAAGVVLAIAIPVGTHPAYPLRSLGLNVANTGGNLRLSWNHEASRRAARAILFIRDGADEHRFEL DSHQLNEGSISYWPASQDVNFRLEWTSPSGTLTESLRAIGAPAQAALPPAPLPPIATAPAVPAATTPPISAGEPPVERQR AANTGPASRQVSRAFTAPASPPVAPPVARAALPEPPVLQPAIPAVHGRDLLQAIVPAPDPNLGAIADTTYHVEVQPVQRR GRSIPLIGKRSLRAEYVPPAPLHQSVIPNVPRRDVARTIDVKVYVNPAGKVDYAELLSRVSKADVDLASTLVFSARRWEF VPARDGADPATGEVILHYRFGPANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62885; Mature: 62885
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDSAGVAPGPEPIVDGNWLITEIPGKPVIVRFSLDFVMRLGMAVREGFKALPRRGLETG CCCCCCCCCCCCCEECCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC GLLVGATHKDRGRLVIDVRDFEPVESEHATGPSYMLSDLDRRLLESRIAARQAGKKGNTV CEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IGFYRSHTRRNFAVTMEDAALFSTYFRKPLDLFLLIKSNDGAPPTCGLLLRESGKELSGS EEEEECCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCC PCVQFPFDAYIFPMPPRELPEADPQPRTEALVPLPPPASTVSPNPAPPSAAPSNLVLWNP CCEECCCCCEEECCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECC AGLKQLLARWPAWIAIAAGVVLAIAIPVGTHPAYPLRSLGLNVANTGGNLRLSWNHEASR HHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCCHHHHCCEEECCCCEEEEEECCHHHH RAARAILFIRDGADEHRFELDSHQLNEGSISYWPASQDVNFRLEWTSPSGTLTESLRAIG HHEEEEEEEECCCCCCEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHC APAQAALPPAPLPPIATAPAVPAATTPPISAGEPPVERQRAANTGPASRQVSRAFTAPAS CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCC PPVAPPVARAALPEPPVLQPAIPAVHGRDLLQAIVPAPDPNLGAIADTTYHVEVQPVQRR CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEEEHHHC GRSIPLIGKRSLRAEYVPPAPLHQSVIPNVPRRDVARTIDVKVYVNPAGKVDYAELLSRV CCCCCEECCCCCCCCCCCCCCCCHHHCCCCCHHHHCEEEEEEEEECCCCCCCHHHHHHHH SKADVDLASTLVFSARRWEFVPARDGADPATGEVILHYRFGPANP HHCCHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MEDSAGVAPGPEPIVDGNWLITEIPGKPVIVRFSLDFVMRLGMAVREGFKALPRRGLETG CCCCCCCCCCCCCEECCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC GLLVGATHKDRGRLVIDVRDFEPVESEHATGPSYMLSDLDRRLLESRIAARQAGKKGNTV CEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IGFYRSHTRRNFAVTMEDAALFSTYFRKPLDLFLLIKSNDGAPPTCGLLLRESGKELSGS EEEEECCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCC PCVQFPFDAYIFPMPPRELPEADPQPRTEALVPLPPPASTVSPNPAPPSAAPSNLVLWNP CCEECCCCCEEECCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECC AGLKQLLARWPAWIAIAAGVVLAIAIPVGTHPAYPLRSLGLNVANTGGNLRLSWNHEASR HHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCCHHHHCCEEECCCCEEEEEECCHHHH RAARAILFIRDGADEHRFELDSHQLNEGSISYWPASQDVNFRLEWTSPSGTLTESLRAIG HHEEEEEEEECCCCCCEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHC APAQAALPPAPLPPIATAPAVPAATTPPISAGEPPVERQRAANTGPASRQVSRAFTAPAS CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCC PPVAPPVARAALPEPPVLQPAIPAVHGRDLLQAIVPAPDPNLGAIADTTYHVEVQPVQRR CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEEEHHHC GRSIPLIGKRSLRAEYVPPAPLHQSVIPNVPRRDVARTIDVKVYVNPAGKVDYAELLSRV CCCCCEECCCCCCCCCCCCCCCCHHHCCCCCHHHHCEEEEEEEEECCCCCCCHHHHHHHH SKADVDLASTLVFSARRWEFVPARDGADPATGEVILHYRFGPANP HHCCHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA