| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624225
Identifier: 116624225
GI number: 116624225
Start: 6463023
End: 6465104
Strand: Direct
Name: 116624225
Synonym: Acid_5141
Alternate gene names: NA
Gene position: 6463023-6465104 (Clockwise)
Preceding gene: 116624224
Following gene: 116624226
Centisome position: 64.85
GC content: 66.23
Gene sequence:
>2082_bases TTGCAATCAAGGCCAAGTGAGAAACGGCTCAGCCTCGGGATTTTGATCGCCGTGGCGGCCGTTCAAGCCGTCGGGCTGTT GCCCGAACTCTCCCCGACCGTGGTCCGCCAGGCCGACGCCACTTCCCATTTCACGATTATCGAGGGCATGGCGCAAGCCG TGCAGCAGGGCGCCAATCCGCTGGATTTCTGGAGTCCGGAGATCAGCTTCGGCTTCCCGATCACCCGCACCTACCAGATT CTGTCACACGGCATGGTGACGCTGGCATACTTCGCCCTTGGCAAAACGGCGGCGCTGGCTACTGTGTATGCGTGGGCGAG CTACCTCGCGATCCTGGCGCTCCCGTTCGCAATTTTCTGGTGCCTGCTTCTGCTCGACTTCCCTCCCCTCACCGCCGCCG CCGCCGTGCTGTTGGCTCCCCTGATCGCCGGCCCTGGCGTGGGGCAACTCGGCATGGAGCTGCGCAGCTGGCTGCGCTTC GGCGTCTTTCCGCAGTCGGTCGCCACCAGCCTGTCGCTGCTCACACTCGGCCTGGCGTGGCGCGCCGTGCGCACCGGACG CCGGCTTGTGCTGACCGGCGCCATGCTTGGCCTGACCATGCTCGCGCATCTGGTCTACGGCTGGATGGGCGCACTGACCA TCTGTCTCATGGCGCTGCTCCCCGAGGCCGGCATTCCACGCCGTTCGCGCATCCTCCGCACCCTTCAGGTAGGGCTGGTG TCGTTCGCGCTCTGCGCCTTTCAACTGCTGCCGATCTTCGCCGACGGCTACCTGATCAACCGCTCACGCATCGAGCAGGC GGAGAAGTACGATTCGCACGGCGCAGCCAAGGTGCTGGGCTGGCTCTTCCGCGGCCGGATTCTGGATAACGACCGGCTGC CCGCACTCTCGCTGCTGGCACTGGTCGGCACTGCCCTGCTCCTCTGGCGGTACCGCGCGACGCGCAAGGTCCCGGCCCCC GAGCGTTTCGTGCTCGCCGCGGCCGTCTTCTGGATCCTGGTCTTTTTCGGTCGCCCCACATGGGGTATCCTCCTGGTCCT GCTCGGCGTGACACCGGATTTGCAGCTGCATCGTGTGATCGCCGGGGTCCAGATCTTTCTGCTGTTCCTGGCCGCCGTAG CGCTGGCCGAATTGTGGCGGCAGGCCGCCGGCCGCTGGCACCCGATTGCTGCGGTGCTGGCGACGGCGATTCTGCTGACT CCAGCAGTCCTGGAACGCGCGCGCTACCTGGCGAGCTGGAAGGAAAACGTGGCTCGGGATGCGGCCGGCATCACTGCCGA GGGCAAAGATCTGGACGCCGCCATCGCGGTGCTGAAGCAGCGCGGGGGACGCGCGTACGCCGGTCTCCAGGCAGGCTGGG GACCACAATTCTACGTCGGCGGCACTCCGGTGGCTGCCTTCCTCAGCACGGCGCAGGTGCCGGCCGTGTCCTTTCCCTTC AACGCAAGCGCGCTGCCCACCGACATCATGCTGCGCTTTGACGAACGCGACCCGGCGCACTACCGCCTGTTCAACGTGCG CAGCCTGCTGGTGCCGGTGGGCGGGACTCCGCCGGATTTCCTGAAGCCCGAAGCGTCCATGGGGCGTTTCCAGGTGTGGA GCGCGCCCGGGTCCGGGTACTTCGACGTGGTGGATGTGACCGATGCGAAGCCCACGACGCGGGAGAGCTTCTACGACATC AGCGACGCCTGGCTGCACGGCGGCGGGTTCGCCAAGTCCCGCTACGTCCGCCTCGATTTCCACGGAGAACCGGCCACCGA CCTGCCCCCGGCGGGCAGCGATCCACCGGGCCGGGTGCTCTCCGAACGGCAGTACGAAGCCTCCGTGGAAGTGCAGCGCC CGGCATTCGTGCTATTCCGCATGACGTGGCATCCGAACTGGAAGGTGCTGGTAGACGGACAGCCAACGAAAACGGCGATG CTCACTCCGGGATTTCTGGGCGTCTCCGTGACGGCAGGCCGGCATGACATTGTATGCCGGTACGAGCCCGGAAATTTGAA AATCCTGATGGCGCTCGCCGGCCTCGCAGTCGTGCTGTTGCTGGGCGTATTGGAGTGGCGGCGCTCCGCGATGGCTCCCT AA
Upstream 100 bases:
>100_bases GGCAACCTGTATAAAATCTGGCCCAAGGAAAAGCTGGAACCCGGCGAGTACGCAGTGGTAGAGTACACCGAGGGAAAGAT GAATATTCAGGTCTGGGACT
Downstream 100 bases:
>100_bases CCGTATTACACTGCTCTTGTTTGCTCGCAGGCCGCGAAGGTTCAAGGGGCCCGGCGTTGTGGGGCAGGCAATCGTGACTG CAGCCGGCTTTCAGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MQSRPSEKRLSLGILIAVAAVQAVGLLPELSPTVVRQADATSHFTIIEGMAQAVQQGANPLDFWSPEISFGFPITRTYQI LSHGMVTLAYFALGKTAALATVYAWASYLAILALPFAIFWCLLLLDFPPLTAAAAVLLAPLIAGPGVGQLGMELRSWLRF GVFPQSVATSLSLLTLGLAWRAVRTGRRLVLTGAMLGLTMLAHLVYGWMGALTICLMALLPEAGIPRRSRILRTLQVGLV SFALCAFQLLPIFADGYLINRSRIEQAEKYDSHGAAKVLGWLFRGRILDNDRLPALSLLALVGTALLLWRYRATRKVPAP ERFVLAAAVFWILVFFGRPTWGILLVLLGVTPDLQLHRVIAGVQIFLLFLAAVALAELWRQAAGRWHPIAAVLATAILLT PAVLERARYLASWKENVARDAAGITAEGKDLDAAIAVLKQRGGRAYAGLQAGWGPQFYVGGTPVAAFLSTAQVPAVSFPF NASALPTDIMLRFDERDPAHYRLFNVRSLLVPVGGTPPDFLKPEASMGRFQVWSAPGSGYFDVVDVTDAKPTTRESFYDI SDAWLHGGGFAKSRYVRLDFHGEPATDLPPAGSDPPGRVLSERQYEASVEVQRPAFVLFRMTWHPNWKVLVDGQPTKTAM LTPGFLGVSVTAGRHDIVCRYEPGNLKILMALAGLAVVLLLGVLEWRRSAMAP
Sequences:
>Translated_693_residues MQSRPSEKRLSLGILIAVAAVQAVGLLPELSPTVVRQADATSHFTIIEGMAQAVQQGANPLDFWSPEISFGFPITRTYQI LSHGMVTLAYFALGKTAALATVYAWASYLAILALPFAIFWCLLLLDFPPLTAAAAVLLAPLIAGPGVGQLGMELRSWLRF GVFPQSVATSLSLLTLGLAWRAVRTGRRLVLTGAMLGLTMLAHLVYGWMGALTICLMALLPEAGIPRRSRILRTLQVGLV SFALCAFQLLPIFADGYLINRSRIEQAEKYDSHGAAKVLGWLFRGRILDNDRLPALSLLALVGTALLLWRYRATRKVPAP ERFVLAAAVFWILVFFGRPTWGILLVLLGVTPDLQLHRVIAGVQIFLLFLAAVALAELWRQAAGRWHPIAAVLATAILLT PAVLERARYLASWKENVARDAAGITAEGKDLDAAIAVLKQRGGRAYAGLQAGWGPQFYVGGTPVAAFLSTAQVPAVSFPF NASALPTDIMLRFDERDPAHYRLFNVRSLLVPVGGTPPDFLKPEASMGRFQVWSAPGSGYFDVVDVTDAKPTTRESFYDI SDAWLHGGGFAKSRYVRLDFHGEPATDLPPAGSDPPGRVLSERQYEASVEVQRPAFVLFRMTWHPNWKVLVDGQPTKTAM LTPGFLGVSVTAGRHDIVCRYEPGNLKILMALAGLAVVLLLGVLEWRRSAMAP >Mature_693_residues MQSRPSEKRLSLGILIAVAAVQAVGLLPELSPTVVRQADATSHFTIIEGMAQAVQQGANPLDFWSPEISFGFPITRTYQI LSHGMVTLAYFALGKTAALATVYAWASYLAILALPFAIFWCLLLLDFPPLTAAAAVLLAPLIAGPGVGQLGMELRSWLRF GVFPQSVATSLSLLTLGLAWRAVRTGRRLVLTGAMLGLTMLAHLVYGWMGALTICLMALLPEAGIPRRSRILRTLQVGLV SFALCAFQLLPIFADGYLINRSRIEQAEKYDSHGAAKVLGWLFRGRILDNDRLPALSLLALVGTALLLWRYRATRKVPAP ERFVLAAAVFWILVFFGRPTWGILLVLLGVTPDLQLHRVIAGVQIFLLFLAAVALAELWRQAAGRWHPIAAVLATAILLT PAVLERARYLASWKENVARDAAGITAEGKDLDAAIAVLKQRGGRAYAGLQAGWGPQFYVGGTPVAAFLSTAQVPAVSFPF NASALPTDIMLRFDERDPAHYRLFNVRSLLVPVGGTPPDFLKPEASMGRFQVWSAPGSGYFDVVDVTDAKPTTRESFYDI SDAWLHGGGFAKSRYVRLDFHGEPATDLPPAGSDPPGRVLSERQYEASVEVQRPAFVLFRMTWHPNWKVLVDGQPTKTAM LTPGFLGVSVTAGRHDIVCRYEPGNLKILMALAGLAVVLLLGVLEWRRSAMAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75388; Mature: 75388
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSRPSEKRLSLGILIAVAAVQAVGLLPELSPTVVRQADATSHFTIIEGMAQAVQQGANP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LDFWSPEISFGFPITRTYQILSHGMVTLAYFALGKTAALATVYAWASYLAILALPFAIFW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLLLLDFPPLTAAAAVLLAPLIAGPGVGQLGMELRSWLRFGVFPQSVATSLSLLTLGLAW HHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RAVRTGRRLVLTGAMLGLTMLAHLVYGWMGALTICLMALLPEAGIPRRSRILRTLQVGLV HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SFALCAFQLLPIFADGYLINRSRIEQAEKYDSHGAAKVLGWLFRGRILDNDRLPALSLLA HHHHHHHHHHHHHHCCEEECHHHHHHHHHHCCCCHHHHHHHHHHCEECCCCCCHHHHHHH LVGTALLLWRYRATRKVPAPERFVLAAAVFWILVFFGRPTWGILLVLLGVTPDLQLHRVI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH AGVQIFLLFLAAVALAELWRQAAGRWHPIAAVLATAILLTPAVLERARYLASWKENVARD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGITAEGKDLDAAIAVLKQRGGRAYAGLQAGWGPQFYVGGTPVAAFLSTAQVPAVSFPF HCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHCCCCEECCC NASALPTDIMLRFDERDPAHYRLFNVRSLLVPVGGTPPDFLKPEASMGRFQVWSAPGSGY CCCCCCHHHEEEECCCCCCCEEEEEHHEEEEECCCCCCHHCCCCCCCCCEEEEECCCCCC FDVVDVTDAKPTTRESFYDISDAWLHGGGFAKSRYVRLDFHGEPATDLPPAGSDPPGRVL EEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH SERQYEASVEVQRPAFVLFRMTWHPNWKVLVDGQPTKTAMLTPGFLGVSVTAGRHDIVCR HCCHHCCCEEECCCEEEEEEEEECCCEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEE YEPGNLKILMALAGLAVVLLLGVLEWRRSAMAP ECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQSRPSEKRLSLGILIAVAAVQAVGLLPELSPTVVRQADATSHFTIIEGMAQAVQQGANP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LDFWSPEISFGFPITRTYQILSHGMVTLAYFALGKTAALATVYAWASYLAILALPFAIFW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLLLLDFPPLTAAAAVLLAPLIAGPGVGQLGMELRSWLRFGVFPQSVATSLSLLTLGLAW HHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RAVRTGRRLVLTGAMLGLTMLAHLVYGWMGALTICLMALLPEAGIPRRSRILRTLQVGLV HHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SFALCAFQLLPIFADGYLINRSRIEQAEKYDSHGAAKVLGWLFRGRILDNDRLPALSLLA HHHHHHHHHHHHHHCCEEECHHHHHHHHHHCCCCHHHHHHHHHHCEECCCCCCHHHHHHH LVGTALLLWRYRATRKVPAPERFVLAAAVFWILVFFGRPTWGILLVLLGVTPDLQLHRVI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH AGVQIFLLFLAAVALAELWRQAAGRWHPIAAVLATAILLTPAVLERARYLASWKENVARD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGITAEGKDLDAAIAVLKQRGGRAYAGLQAGWGPQFYVGGTPVAAFLSTAQVPAVSFPF HCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHCCCCEECCC NASALPTDIMLRFDERDPAHYRLFNVRSLLVPVGGTPPDFLKPEASMGRFQVWSAPGSGY CCCCCCHHHEEEECCCCCCCEEEEEHHEEEEECCCCCCHHCCCCCCCCCEEEEECCCCCC FDVVDVTDAKPTTRESFYDISDAWLHGGGFAKSRYVRLDFHGEPATDLPPAGSDPPGRVL EEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH SERQYEASVEVQRPAFVLFRMTWHPNWKVLVDGQPTKTAMLTPGFLGVSVTAGRHDIVCR HCCHHCCCEEECCCEEEEEEEEECCCEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEE YEPGNLKILMALAGLAVVLLLGVLEWRRSAMAP ECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA