| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is feoB [H]
Identifier: 116624158
GI number: 116624158
Start: 6408797
End: 6410674
Strand: Direct
Name: feoB [H]
Synonym: Acid_5074
Alternate gene names: 116624158
Gene position: 6408797-6410674 (Clockwise)
Preceding gene: 116624157
Following gene: 116624160
Centisome position: 64.31
GC content: 65.23
Gene sequence:
>1878_bases GTGAGTGATTGCCACGATTGCCATGGATGCGGTACGCAGGTTGCGGAATTAACGCGGCCGGCGGCGGTGCGCACCGTGGC GCTCGTGGGTCCGCCCAACTCGGGCAAGACGACACTGTTCAACCGGCTGACGGGATTGCGGCAGAAGGTCGCGAATTTTC CCGGCGTGACGGTGGAGCAGCATACCGGGATCGCGGAGTTTCCGGACGGGCGCGCGGTCACGATCGTCGATCTTCCGGGG ATCTACAGCCTGCAGCCACGCTCGGAAGACGAGCAGGTGGCTTACGATGTGCTGCACGGCAAGCGCGCGGGAACGGCAAA GCCGGAAGCGGTGCTGCTGGTTCTGGACTCGACCAACCTGGCGCGCCACCTGATGCTGGCCGCGCCGATTCTGGCGCTCG GGCTGCCGACGCTGATCATCCTTAATATGGCCGACGACCTGCGCAATCGTGGCGGCAAGCTGGATTTGCGCAAGCTCTCG CACGAGCTGGGCGCGCCGGTAGCGTTGATCAGCGCGCGCGCGGGCGAAGGCGTGGACGAGGTCTTCGATTTTCTGGCGGG CACGATGGCTAAGCCCTCGCCAACGCTGCTGCCGATTTTGCAGGACGTACCGAAGTGCCGCGAGTGGGCGGGAACGGTCG GCAGCAAGGCGGGGTATCGGGCGCCGATCGCGCCCAAGTGGACGCGGCGGCTGGATTCGGTGTTCCTGCATCCGGTGGCC GGACCGCTGGTGTTCCTGCTGGTAGTGGTGGGCGTGATCCGCACGATCTTCATGGCGGCGGCGCCGATTAGCGACGCGGC GCAGAGTTTCATCGCAACCAGCGGCAAGTGGCTTGCAGGTGCGCTGCCGGCCTCGCCGTTGAGCTCGCTGCTGGTGGATG GCGTGTGGAAGGGCGTGGGCAGCGTGCTGGTCTTCCTGCCGCAGGTACTGCTGCTGTTCCTTTTTATCGGCATTCTGGAA GACTCGGGCTACCTGGCGCGGGCGGCGCTGATCGCGGACCGCACGATGGCGCGGGTGGGGCTGCAGGGCAAGAGCTTCAT CCCGCTGCTCTCGGCTTACGGCTGCGCGGTGCCGGCGATCATGGCGACCCGGACTATCGAAAACAAGCGCGACCGGATCG CGACGATCCTGATCGCGCCCTTCATGACGTGCTCGGCGCGGCTGCCGGTGTACGCGCTGCTGATTGCGGCGTTCATACCG GAGCGCAACTTCGTCGGGAGCGTCATCACCACGCAGGTGGCGGCGCTGCTGGGTTTGTATCTGCTCGGATTTCTGGCGGC GGTGGTGACGGCGAAACTGTTGAAATCGAGCGTGCTGAAAAGTGTGCAGGCGCCGTTCGTGCTGGAGATGCCGAGCTATC GCTGGCCCACGGTGCAATCGCTCGGGCTGCGGCTGCTGGACCGGAGCAAGGTTTTTCTGCGGCGCGCGGGAACCGTGATC CTGCTGGTGACGGTGATTTTGTGGGTGGCGACTTACCTGCCGTACAGCGGGGGCAAGCCGCCCATCGAGAACAGCCTGGC AGGGACGGTGGGACGCACGATCGAACCGATCATCCAGCCGCTGGGTTTCAACTGGAAGATCGGAGTCGGGCTGATCACTT CGCTGGCCGCGCGCGAGACGATCATCAGCACGCTCGGGTTGATCTACGGGATGGATCCGGATTCGCAGGGGATGGAGCTG CAGAAGTCACTGCGGGCGGACCTGACGACGGGCGGAGCGTTCGCGCTGTTGATCTTCTTCGCGTTCGCGATGCAGTGCAT GTCCACGGTGGCGGTGGTGCGCCGCGAGACGGGCGGGTGGATGTGGCCGGTGCTGCAATTCGCGTATATGGGCGCGCTGG CTTACGCCGGGGCGTTCGTCGCATTCCACGTGATATAG
Upstream 100 bases:
>100_bases GGGTATTTCAAGTGGATGGATCGGAGATTGCGCTGCGGCGGGTGACGGCGCGCCACCTTAAGGTGCGGTTGGAAAATTCC GGAAAGGCGCCGAAAAAACC
Downstream 100 bases:
>100_bases CGTTTATTGAGACGCCGGCTGAAAGCCGGCGGCAGCCAGGATTGTCTGCCCCACAAAACAGCATGCAGCGATCGCTCCCT TACGGTCGCGGCTCTTCGAA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MSDCHDCHGCGTQVAELTRPAAVRTVALVGPPNSGKTTLFNRLTGLRQKVANFPGVTVEQHTGIAEFPDGRAVTIVDLPG IYSLQPRSEDEQVAYDVLHGKRAGTAKPEAVLLVLDSTNLARHLMLAAPILALGLPTLIILNMADDLRNRGGKLDLRKLS HELGAPVALISARAGEGVDEVFDFLAGTMAKPSPTLLPILQDVPKCREWAGTVGSKAGYRAPIAPKWTRRLDSVFLHPVA GPLVFLLVVVGVIRTIFMAAAPISDAAQSFIATSGKWLAGALPASPLSSLLVDGVWKGVGSVLVFLPQVLLLFLFIGILE DSGYLARAALIADRTMARVGLQGKSFIPLLSAYGCAVPAIMATRTIENKRDRIATILIAPFMTCSARLPVYALLIAAFIP ERNFVGSVITTQVAALLGLYLLGFLAAVVTAKLLKSSVLKSVQAPFVLEMPSYRWPTVQSLGLRLLDRSKVFLRRAGTVI LLVTVILWVATYLPYSGGKPPIENSLAGTVGRTIEPIIQPLGFNWKIGVGLITSLAARETIISTLGLIYGMDPDSQGMEL QKSLRADLTTGGAFALLIFFAFAMQCMSTVAVVRRETGGWMWPVLQFAYMGALAYAGAFVAFHVI
Sequences:
>Translated_625_residues MSDCHDCHGCGTQVAELTRPAAVRTVALVGPPNSGKTTLFNRLTGLRQKVANFPGVTVEQHTGIAEFPDGRAVTIVDLPG IYSLQPRSEDEQVAYDVLHGKRAGTAKPEAVLLVLDSTNLARHLMLAAPILALGLPTLIILNMADDLRNRGGKLDLRKLS HELGAPVALISARAGEGVDEVFDFLAGTMAKPSPTLLPILQDVPKCREWAGTVGSKAGYRAPIAPKWTRRLDSVFLHPVA GPLVFLLVVVGVIRTIFMAAAPISDAAQSFIATSGKWLAGALPASPLSSLLVDGVWKGVGSVLVFLPQVLLLFLFIGILE DSGYLARAALIADRTMARVGLQGKSFIPLLSAYGCAVPAIMATRTIENKRDRIATILIAPFMTCSARLPVYALLIAAFIP ERNFVGSVITTQVAALLGLYLLGFLAAVVTAKLLKSSVLKSVQAPFVLEMPSYRWPTVQSLGLRLLDRSKVFLRRAGTVI LLVTVILWVATYLPYSGGKPPIENSLAGTVGRTIEPIIQPLGFNWKIGVGLITSLAARETIISTLGLIYGMDPDSQGMEL QKSLRADLTTGGAFALLIFFAFAMQCMSTVAVVRRETGGWMWPVLQFAYMGALAYAGAFVAFHVI >Mature_624_residues SDCHDCHGCGTQVAELTRPAAVRTVALVGPPNSGKTTLFNRLTGLRQKVANFPGVTVEQHTGIAEFPDGRAVTIVDLPGI YSLQPRSEDEQVAYDVLHGKRAGTAKPEAVLLVLDSTNLARHLMLAAPILALGLPTLIILNMADDLRNRGGKLDLRKLSH ELGAPVALISARAGEGVDEVFDFLAGTMAKPSPTLLPILQDVPKCREWAGTVGSKAGYRAPIAPKWTRRLDSVFLHPVAG PLVFLLVVVGVIRTIFMAAAPISDAAQSFIATSGKWLAGALPASPLSSLLVDGVWKGVGSVLVFLPQVLLLFLFIGILED SGYLARAALIADRTMARVGLQGKSFIPLLSAYGCAVPAIMATRTIENKRDRIATILIAPFMTCSARLPVYALLIAAFIPE RNFVGSVITTQVAALLGLYLLGFLAAVVTAKLLKSSVLKSVQAPFVLEMPSYRWPTVQSLGLRLLDRSKVFLRRAGTVIL LVTVILWVATYLPYSGGKPPIENSLAGTVGRTIEPIIQPLGFNWKIGVGLITSLAARETIISTLGLIYGMDPDSQGMELQ KSLRADLTTGGAFALLIFFAFAMQCMSTVAVVRRETGGWMWPVLQFAYMGALAYAGAFVAFHVI
Specific function: It seems that the Fe(2+) uptake in C.jejuni cannot be attributed to feoB [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=604, Percent_Identity=33.2781456953642, Blast_Score=270, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011642 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 66873; Mature: 66742
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDCHDCHGCGTQVAELTRPAAVRTVALVGPPNSGKTTLFNRLTGLRQKVANFPGVTVEQ CCCCCCHHCCHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC HTGIAEFPDGRAVTIVDLPGIYSLQPRSEDEQVAYDVLHGKRAGTAKPEAVLLVLDSTNL CCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH ARHLMLAAPILALGLPTLIILNMADDLRNRGGKLDLRKLSHELGAPVALISARAGEGVDE HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHH VFDFLAGTMAKPSPTLLPILQDVPKCREWAGTVGSKAGYRAPIAPKWTRRLDSVFLHPVA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GPLVFLLVVVGVIRTIFMAAAPISDAAQSFIATSGKWLAGALPASPLSSLLVDGVWKGVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHH SVLVFLPQVLLLFLFIGILEDSGYLARAALIADRTMARVGLQGKSFIPLLSAYGCAVPAI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MATRTIENKRDRIATILIAPFMTCSARLPVYALLIAAFIPERNFVGSVITTQVAALLGLY HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLGFLAAVVTAKLLKSSVLKSVQAPFVLEMPSYRWPTVQSLGLRLLDRSKVFLRRAGTVI HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH LLVTVILWVATYLPYSGGKPPIENSLAGTVGRTIEPIIQPLGFNWKIGVGLITSLAARET HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH IISTLGLIYGMDPDSQGMELQKSLRADLTTGGAFALLIFFAFAMQCMSTVAVVRRETGGW HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MWPVLQFAYMGALAYAGAFVAFHVI HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDCHDCHGCGTQVAELTRPAAVRTVALVGPPNSGKTTLFNRLTGLRQKVANFPGVTVEQ CCCCCHHCCHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEC HTGIAEFPDGRAVTIVDLPGIYSLQPRSEDEQVAYDVLHGKRAGTAKPEAVLLVLDSTNL CCCCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH ARHLMLAAPILALGLPTLIILNMADDLRNRGGKLDLRKLSHELGAPVALISARAGEGVDE HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHH VFDFLAGTMAKPSPTLLPILQDVPKCREWAGTVGSKAGYRAPIAPKWTRRLDSVFLHPVA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GPLVFLLVVVGVIRTIFMAAAPISDAAQSFIATSGKWLAGALPASPLSSLLVDGVWKGVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHH SVLVFLPQVLLLFLFIGILEDSGYLARAALIADRTMARVGLQGKSFIPLLSAYGCAVPAI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MATRTIENKRDRIATILIAPFMTCSARLPVYALLIAAFIPERNFVGSVITTQVAALLGLY HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLGFLAAVVTAKLLKSSVLKSVQAPFVLEMPSYRWPTVQSLGLRLLDRSKVFLRRAGTVI HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH LLVTVILWVATYLPYSGGKPPIENSLAGTVGRTIEPIIQPLGFNWKIGVGLITSLAARET HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH IISTLGLIYGMDPDSQGMELQKSLRADLTTGGAFALLIFFAFAMQCMSTVAVVRRETGGW HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MWPVLQFAYMGALAYAGAFVAFHVI HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]