| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yegT [H]
Identifier: 116624139
GI number: 116624139
Start: 6384794
End: 6386029
Strand: Direct
Name: yegT [H]
Synonym: Acid_5055
Alternate gene names: 116624139
Gene position: 6384794-6386029 (Clockwise)
Preceding gene: 116624138
Following gene: 116624141
Centisome position: 64.07
GC content: 59.79
Gene sequence:
>1236_bases ATGCCCACTTCGCTGAAGGCGCGACTCTGCCTGATGATGTTCCTCAACTACGTCATTTGGGGATCGTGGTACGTCACCAT CGGCACATACCTCACCGCCACCCTGAAATTCTCAGGCACCGAGGCCGGCGCTATCTTCGGCACCACCGCGCTCGCCAGCA TGATCTCGCCCTTCTTCATTGGCATGGTCGCCGATCGCTTCTTCTCCACCGAAAAAGTTCTGGCCGTCCTCCACCTGATC GGCGCTGTGCTGCTCTACTTCATCACCCAGGCCACCAGCTTCACTTCCGTCTACACGCTCGTGCTGGCCTACTGCCTCTG TTACTTCCCCACCATCGGCCTCACCAACTCGCTGACCCTGCAGCAGCTCACCAACGCCGGCAATCAATTCCCCTTCATCC GCATGTTCGCCACCATCGGCTGGATCGCCATCGGCCAGACCATCGGCAACATGGGCATCGAAACCACCGCGACTCCCTTC CTGCTCGCCGCCGGAGCGTCGGTTGTCATGGCGCTCTACTGCCTCACACTCCCCCACACACCGCCTCCGGGAAAGGGCAA GGGCCAAAAGGTCACGGTTCGCGAACTCCTCGGGCTCGATGCGCTCGTGATGCTCAAGCGCCGTCCGTACTTCATCTTCG TAGTCGCGTCGATACTGGCCTGTATCCCCCTCACCTTTTACTTCTCATTCACCAATGCTTTTCTAAACGAAGTCGGTGTG GTCAACGCCGCCGGCAAGATGACGCTCGGCCAGGTTTCGGAGGTCGGCGTCATGCTGCTCATGCCGTTCATCTTCCGCAA GATCACAGTGCGCGGCGTCTTCATGCTCGGCCTCGCCTGTTGGAGTCTGCGCTACGGCCTGCTTGCCTTCGGCAACGCCA ACGCGGGCATCTGGATGTTCTACCTCGCCATCATCCTTCACGGCTTCTGCTTCGATTTCTTCTTCATGACCGGCCAGCTC TACACCGATCAGGAAGCACCCGCCCACCTGCGCGGCACGGCTCAGGGATTCCTCACCTTCGTCACTTACGGCGTCGGCAT GTTCATCGGTTCCCTGCTCTCCGGCGTTGCCCTGGATTTCTTCTCCACCACTGTCGATGGGAAACTCCAGCACAACTGGC AGTCCTTCTGGCTCGCCTCGGGCGCAGGTGCACTTCTCATCCTCGCTCTGGTCGCCATCTTCTTCCAGACCCGCGCCAAA GTCGAGACCAAGAAAGCTGCGACCCAAACGTCTTAG
Upstream 100 bases:
>100_bases TCCCCTGCACCAAAGGAGGGCGGGCTTACCGGTCCGCCCTTTCCCCTTCGCCGCGAACCGCGACCATCAGGGAGCGATCC CAATTGTTACACTGGCACCT
Downstream 100 bases:
>100_bases TTTCTCAACAGCGCCGCCACCAGGCCCGCCAGCACCACCAGGCCGAACCCGCCCATCGAGACTATCAACAGCCGGTGCCA TTTCATCCCTGCCAGCCCGC
Product: nucleoside:H+ symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MPTSLKARLCLMMFLNYVIWGSWYVTIGTYLTATLKFSGTEAGAIFGTTALASMISPFFIGMVADRFFSTEKVLAVLHLI GAVLLYFITQATSFTSVYTLVLAYCLCYFPTIGLTNSLTLQQLTNAGNQFPFIRMFATIGWIAIGQTIGNMGIETTATPF LLAAGASVVMALYCLTLPHTPPPGKGKGQKVTVRELLGLDALVMLKRRPYFIFVVASILACIPLTFYFSFTNAFLNEVGV VNAAGKMTLGQVSEVGVMLLMPFIFRKITVRGVFMLGLACWSLRYGLLAFGNANAGIWMFYLAIILHGFCFDFFFMTGQL YTDQEAPAHLRGTAQGFLTFVTYGVGMFIGSLLSGVALDFFSTTVDGKLQHNWQSFWLASGAGALLILALVAIFFQTRAK VETKKAATQTS
Sequences:
>Translated_411_residues MPTSLKARLCLMMFLNYVIWGSWYVTIGTYLTATLKFSGTEAGAIFGTTALASMISPFFIGMVADRFFSTEKVLAVLHLI GAVLLYFITQATSFTSVYTLVLAYCLCYFPTIGLTNSLTLQQLTNAGNQFPFIRMFATIGWIAIGQTIGNMGIETTATPF LLAAGASVVMALYCLTLPHTPPPGKGKGQKVTVRELLGLDALVMLKRRPYFIFVVASILACIPLTFYFSFTNAFLNEVGV VNAAGKMTLGQVSEVGVMLLMPFIFRKITVRGVFMLGLACWSLRYGLLAFGNANAGIWMFYLAIILHGFCFDFFFMTGQL YTDQEAPAHLRGTAQGFLTFVTYGVGMFIGSLLSGVALDFFSTTVDGKLQHNWQSFWLASGAGALLILALVAIFFQTRAK VETKKAATQTS >Mature_410_residues PTSLKARLCLMMFLNYVIWGSWYVTIGTYLTATLKFSGTEAGAIFGTTALASMISPFFIGMVADRFFSTEKVLAVLHLIG AVLLYFITQATSFTSVYTLVLAYCLCYFPTIGLTNSLTLQQLTNAGNQFPFIRMFATIGWIAIGQTIGNMGIETTATPFL LAAGASVVMALYCLTLPHTPPPGKGKGQKVTVRELLGLDALVMLKRRPYFIFVVASILACIPLTFYFSFTNAFLNEVGVV NAAGKMTLGQVSEVGVMLLMPFIFRKITVRGVFMLGLACWSLRYGLLAFGNANAGIWMFYLAIILHGFCFDFFFMTGQLY TDQEAPAHLRGTAQGFLTFVTYGVGMFIGSLLSGVALDFFSTTVDGKLQHNWQSFWLASGAGALLILALVAIFFQTRAKV ETKKAATQTS
Specific function: Could be involved in nucleoside transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788415, Length=419, Percent_Identity=38.6634844868735, Blast_Score=295, Evalue=4e-81, Organism=Escherichia coli, GI87082192, Length=423, Percent_Identity=32.1513002364066, Blast_Score=210, Evalue=1e-55, Organism=Escherichia coli, GI1788745, Length=418, Percent_Identity=32.2966507177034, Blast_Score=209, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44879; Mature: 44748
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSLKARLCLMMFLNYVIWGSWYVTIGTYLTATLKFSGTEAGAIFGTTALASMISPFFI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHH GMVADRFFSTEKVLAVLHLIGAVLLYFITQATSFTSVYTLVLAYCLCYFPTIGLTNSLTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QQLTNAGNQFPFIRMFATIGWIAIGQTIGNMGIETTATPFLLAAGASVVMALYCLTLPHT HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PPPGKGKGQKVTVRELLGLDALVMLKRRPYFIFVVASILACIPLTFYFSFTNAFLNEVGV CCCCCCCCCEEHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VNAAGKMTLGQVSEVGVMLLMPFIFRKITVRGVFMLGLACWSLRYGLLAFGNANAGIWMF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH YLAIILHGFCFDFFFMTGQLYTDQEAPAHLRGTAQGFLTFVTYGVGMFIGSLLSGVALDF HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTTVDGKLQHNWQSFWLASGAGALLILALVAIFFQTRAKVETKKAATQTS HHHCCCCHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTSLKARLCLMMFLNYVIWGSWYVTIGTYLTATLKFSGTEAGAIFGTTALASMISPFFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHH GMVADRFFSTEKVLAVLHLIGAVLLYFITQATSFTSVYTLVLAYCLCYFPTIGLTNSLTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH QQLTNAGNQFPFIRMFATIGWIAIGQTIGNMGIETTATPFLLAAGASVVMALYCLTLPHT HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC PPPGKGKGQKVTVRELLGLDALVMLKRRPYFIFVVASILACIPLTFYFSFTNAFLNEVGV CCCCCCCCCEEHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VNAAGKMTLGQVSEVGVMLLMPFIFRKITVRGVFMLGLACWSLRYGLLAFGNANAGIWMF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH YLAIILHGFCFDFFFMTGQLYTDQEAPAHLRGTAQGFLTFVTYGVGMFIGSLLSGVALDF HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTTVDGKLQHNWQSFWLASGAGALLILALVAIFFQTRAKVETKKAATQTS HHHCCCCHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]