Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116624133

Identifier: 116624133

GI number: 116624133

Start: 6374938

End: 6376359

Strand: Reverse

Name: 116624133

Synonym: Acid_5049

Alternate gene names: NA

Gene position: 6376359-6374938 (Counterclockwise)

Preceding gene: 116624134

Following gene: 116624132

Centisome position: 63.98

GC content: 61.04

Gene sequence:

>1422_bases
ATGCGCCCAATCGCACTTGTGGCAATGCTCACAATTGGCTCGGCGTTCGCGGCCAGTCATCGAAACGGTCCGTTACTGCT
CGAAGACCAGACTGCGAATTTGAACGATTTTTACGCTTTTCGAAGTTATGAAGCGGGGAAAAGCGACCGGCTGGTGATGA
GCATGAGCGCGCAAGGATTCCAGGTTCCGGACAATGGACCGAGTTATTACAAGTTCTCGACCAGCGTCCTATACCGGTTC
AATATCAACAACTCGCGGGGCCTTGACGGCGCCCCCGATATGCAGATCGACTTCCAGTTCAGGGATACGTATCGGGATAA
CCCGACATTTGTCTCTTACTTTGGGAAGATTAGCTCGATCGACAGCCCGGGTATATTTCTCTACGAAACTTACGAGGTGA
TTATCCGGGACCTGAAACAGAACAAGATTGTCGCGGTCTACGATAAGGACGTCAACGGGCATCCGCTGTCGGTAGCTCCG
CCCAACCTGGGGCCGAATTCGACGCCGAGTTACGAGAAGAATTTGGGGGCGCCGAGCGTGTTCACACTTGCGAACGGAAT
GCGGGTGTTCGCGGGGCCGCGCGACGATGCCTTTTATTTCGATAGCGGGGCGACGTTCGACACGCTGAATTTCCGGACTC
CGGCGCCGGTGCTGTCGGGCAGCGCGGACACCGGGCAGGGAGCGGCTGCTCCGGCGGCGGTGGATGGTTTCGCGGGATAC
AACATTAGCCTGATCGCAGTGGAAATGCCAATCACGATGGTGACGGCGAACGGGGCGGCGCCGAGCAGCGCGACGGATCC
GAATGGCACGATCGGCGCGTGGGCGAGCACGCTGCGGCAGATCGTGACGGTGCGCCCAAGTCCGAACGATCCGGTGAACT
ACGGCGATTGGATCCAGGTCGATCGCGTGGGAAATCCGCTGACGGTGGAAGCGCTGATTCCGTTGCCGCTCAAGGACCGG
TGGAATCGCAGCCTGCCGGTGGACGACCAGCAGTGGGCGCCGTACATCGGCGACCCGTTCTTCGCCACGGGGATCTTGAA
GGGCGTGTTCAACCTGCCGGTGCCGCCAGCGCCGCGCAAGGATCTGCTTGGGGTGTTTGTGCCCGACCTGACGCGGGTCA
ACCTGTTCACGACGCCGACGGCGTTCGCCAGCCAGAACCGGCTGGGTCCGCTGGGTGGTGACAACGCGGGCTGGCCTTTC
GGCGGACGGCGTCCGGTGGACGATGTAGTGGACATCGGCTTCCGCGCGCTGGCCGGAGTGCTGGTGCCCGGCTTCACGAA
CGCGCCGCCGCTGGGCGATGGAGTGAACTCCAACGACGTGCCGCTATTGGATCACTTCCCATTCCATGCGCCGCCGCACG
CGGGCTTCAAGCACAGCCAGATCGACGGCACGAATGGCAGGGGGATGAACACCAACAACTAA

Upstream 100 bases:

>100_bases
AGTCGCTTATCCATACCTCAAGGGTAGCAGGGGTTTAAATCCAAAAGCGCGATCGCCTCGTAGATACCCGTGTAACCCAG
ATCACTGAGGAGGATTTACG

Downstream 100 bases:

>100_bases
TGGACGCTCCCTGACGGTCGCGGCTCGGTTTTTGCAGCACGCGGGGAATTGCAGCGGCGGCCGTTCGGGGAGCGGCAGGA
GGACGACCATGAGAATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MRPIALVAMLTIGSAFAASHRNGPLLLEDQTANLNDFYAFRSYEAGKSDRLVMSMSAQGFQVPDNGPSYYKFSTSVLYRF
NINNSRGLDGAPDMQIDFQFRDTYRDNPTFVSYFGKISSIDSPGIFLYETYEVIIRDLKQNKIVAVYDKDVNGHPLSVAP
PNLGPNSTPSYEKNLGAPSVFTLANGMRVFAGPRDDAFYFDSGATFDTLNFRTPAPVLSGSADTGQGAAAPAAVDGFAGY
NISLIAVEMPITMVTANGAAPSSATDPNGTIGAWASTLRQIVTVRPSPNDPVNYGDWIQVDRVGNPLTVEALIPLPLKDR
WNRSLPVDDQQWAPYIGDPFFATGILKGVFNLPVPPAPRKDLLGVFVPDLTRVNLFTTPTAFASQNRLGPLGGDNAGWPF
GGRRPVDDVVDIGFRALAGVLVPGFTNAPPLGDGVNSNDVPLLDHFPFHAPPHAGFKHSQIDGTNGRGMNTNN

Sequences:

>Translated_473_residues
MRPIALVAMLTIGSAFAASHRNGPLLLEDQTANLNDFYAFRSYEAGKSDRLVMSMSAQGFQVPDNGPSYYKFSTSVLYRF
NINNSRGLDGAPDMQIDFQFRDTYRDNPTFVSYFGKISSIDSPGIFLYETYEVIIRDLKQNKIVAVYDKDVNGHPLSVAP
PNLGPNSTPSYEKNLGAPSVFTLANGMRVFAGPRDDAFYFDSGATFDTLNFRTPAPVLSGSADTGQGAAAPAAVDGFAGY
NISLIAVEMPITMVTANGAAPSSATDPNGTIGAWASTLRQIVTVRPSPNDPVNYGDWIQVDRVGNPLTVEALIPLPLKDR
WNRSLPVDDQQWAPYIGDPFFATGILKGVFNLPVPPAPRKDLLGVFVPDLTRVNLFTTPTAFASQNRLGPLGGDNAGWPF
GGRRPVDDVVDIGFRALAGVLVPGFTNAPPLGDGVNSNDVPLLDHFPFHAPPHAGFKHSQIDGTNGRGMNTNN
>Mature_473_residues
MRPIALVAMLTIGSAFAASHRNGPLLLEDQTANLNDFYAFRSYEAGKSDRLVMSMSAQGFQVPDNGPSYYKFSTSVLYRF
NINNSRGLDGAPDMQIDFQFRDTYRDNPTFVSYFGKISSIDSPGIFLYETYEVIIRDLKQNKIVAVYDKDVNGHPLSVAP
PNLGPNSTPSYEKNLGAPSVFTLANGMRVFAGPRDDAFYFDSGATFDTLNFRTPAPVLSGSADTGQGAAAPAAVDGFAGY
NISLIAVEMPITMVTANGAAPSSATDPNGTIGAWASTLRQIVTVRPSPNDPVNYGDWIQVDRVGNPLTVEALIPLPLKDR
WNRSLPVDDQQWAPYIGDPFFATGILKGVFNLPVPPAPRKDLLGVFVPDLTRVNLFTTPTAFASQNRLGPLGGDNAGWPF
GGRRPVDDVVDIGFRALAGVLVPGFTNAPPLGDGVNSNDVPLLDHFPFHAPPHAGFKHSQIDGTNGRGMNTNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50951; Mature: 50951

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPIALVAMLTIGSAFAASHRNGPLLLEDQTANLNDFYAFRSYEAGKSDRLVMSMSAQGF
CCHHHEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCE
QVPDNGPSYYKFSTSVLYRFNINNSRGLDGAPDMQIDFQFRDTYRDNPTFVSYFGKISSI
ECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCHHCCC
DSPGIFLYETYEVIIRDLKQNKIVAVYDKDVNGHPLSVAPPNLGPNSTPSYEKNLGAPSV
CCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCHHHCCCCCEE
FTLANGMRVFAGPRDDAFYFDSGATFDTLNFRTPAPVLSGSADTGQGAAAPAAVDGFAGY
EEECCCCEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
NISLIAVEMPITMVTANGAAPSSATDPNGTIGAWASTLRQIVTVRPSPNDPVNYGDWIQV
CEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEE
DRVGNPLTVEALIPLPLKDRWNRSLPVDDQQWAPYIGDPFFATGILKGVFNLPVPPAPRK
ECCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCH
DLLGVFVPDLTRVNLFTTPTAFASQNRLGPLGGDNAGWPFGGRRPVDDVVDIGFRALAGV
HHHEEECCCCEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LVPGFTNAPPLGDGVNSNDVPLLDHFPFHAPPHAGFKHSQIDGTNGRGMNTNN
HCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPIALVAMLTIGSAFAASHRNGPLLLEDQTANLNDFYAFRSYEAGKSDRLVMSMSAQGF
CCHHHEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCE
QVPDNGPSYYKFSTSVLYRFNINNSRGLDGAPDMQIDFQFRDTYRDNPTFVSYFGKISSI
ECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCHHCCC
DSPGIFLYETYEVIIRDLKQNKIVAVYDKDVNGHPLSVAPPNLGPNSTPSYEKNLGAPSV
CCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCHHHCCCCCEE
FTLANGMRVFAGPRDDAFYFDSGATFDTLNFRTPAPVLSGSADTGQGAAAPAAVDGFAGY
EEECCCCEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
NISLIAVEMPITMVTANGAAPSSATDPNGTIGAWASTLRQIVTVRPSPNDPVNYGDWIQV
CEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEE
DRVGNPLTVEALIPLPLKDRWNRSLPVDDQQWAPYIGDPFFATGILKGVFNLPVPPAPRK
ECCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCH
DLLGVFVPDLTRVNLFTTPTAFASQNRLGPLGGDNAGWPFGGRRPVDDVVDIGFRALAGV
HHHEEECCCCEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LVPGFTNAPPLGDGVNSNDVPLLDHFPFHAPPHAGFKHSQIDGTNGRGMNTNN
HCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA