| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624125
Identifier: 116624125
GI number: 116624125
Start: 6365998
End: 6367371
Strand: Reverse
Name: 116624125
Synonym: Acid_5041
Alternate gene names: NA
Gene position: 6367371-6365998 (Counterclockwise)
Preceding gene: 116624128
Following gene: 116624124
Centisome position: 63.89
GC content: 62.81
Gene sequence:
>1374_bases ATGGCCGATCAGGGAATAAGCGCTGAATGCTTGAAGTGCTCTGGACCTCAGTACCTAACTTCCTTTGGACGCCGCAGTTT TATTCAAGTAGGGCTGTTGAGCGGACTCGGACTTAGTTTGGCGGACCTATTGCGCGCGGGCGAAGTGCGTCCCGCGAATC TGGCCGGAAAGCGTGCGGAAGGCCGCGCGAAGAGCGTGATCCAGATCATCCTGCCGGGTGGACTCGCGCACCAGGAATCA TGGGATCCGAAGCCGGAAGCACCGATCGAATACCGCGGGCCGCTGGGTGTGGTGAAGACCAAAATCCCGGGCGTGGTGTT CAGCGAGAACCTGGCGCGCACGGCGCAGGTGGCGGACAAGATCACGGTGGTGCGGTCGGTCACGGGGCGGATTCCCGATC ATGCCCAAGCGACGTACCAGATGTTGACGGGATACCTGCCCACTCCGGCGATTCAGCATCCGGCGATGGGCGCGGTGGTG GCGCACGAGTTCGGTCCGAAGAACAATCTGCCCGCGTGGGTGGGGTTGCCGAGTGTTCCGGCGGGTGCGGGCACGGGATA TCTGAGCTCGAAATATGGCGCGTTCGAACTGGGCGCGGATCCGGCGCAGAAGAATTTCCAGGTGCGCGATATTTCGCTGC CTAAGGGAATGACCGAGGAGCGCTTCGATCGGCGGCGCAGCGCGCGCGAGGCGCTGGAAGATCACTTTCGGCAGGTGGAA CAAAATCCCGCGGAGTTGGACGCGATGGGCGATTTCTACCAGCAGGCGTACAAGTTGATCAGCTCTGCGGGGGCGCGCAA AGCCTTCTCGCTGGATGCCGAGCCGGACTCGATGCTGAAGCTATATGGCGAGTATCCGAAGCGCAGCATCGGCAAGCAGT TGATGCTGGCGCGGCGGCTGGTGGAGGCGGGCGTGCGGCTCGTGACCGTGATGTACAACGGCTCGCAGGGCTGGGACAAT CACGTGCGGATTAAGGACGCGGTGAGTGAAGGGCTGCCGGCATTCGACCACGCCTTCTCGGGATTGATTACCGACCTGGA TCAGCGCGGGCTGTTGGACACCACGCTGGTGACGGTGACGAGCGAGTTTGGGCGCACGCCGAAGGTGAATGAGAATGGCG GGCGCGATCACTGGGCGCGGGCGTATTCGCAGGTGATCGCGGGCGGCGGGATTACGCGCGGGCAGATTTACGGGGCGACG AATGCGACCGCGGCGGAGCCGGATCGCGATCCGGTAACGGTGGAGAATTTCCTGGCAACGGTGTACCACCAGCTCGGAAT CAATGCCGAGGACCGGCTGCTGGCGCCGGGCGGGCGGCCGATTGATATCGTGCGGGATGGAAAATTCGTCGAAGGGTTAT GCAGCGCGAGCTAA
Upstream 100 bases:
>100_bases GGACTCAATTGTCGTACAAAAGGAGGGGTAAAGTTTTGTAAATCAATCAACTTATGACGTTCGCCGGAGTTCTACACTTT AAGACACAGGAGGGGACGGG
Downstream 100 bases:
>100_bases TTAGCGAACGCTCCCTTGCTCACCAAGGGCGAGTGACGGTCGCGGGTCGGATGGTTTTCGGGTTGTTATTCGCTGCTGTG GTGGCGTGGGGGGATCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MADQGISAECLKCSGPQYLTSFGRRSFIQVGLLSGLGLSLADLLRAGEVRPANLAGKRAEGRAKSVIQIILPGGLAHQES WDPKPEAPIEYRGPLGVVKTKIPGVVFSENLARTAQVADKITVVRSVTGRIPDHAQATYQMLTGYLPTPAIQHPAMGAVV AHEFGPKNNLPAWVGLPSVPAGAGTGYLSSKYGAFELGADPAQKNFQVRDISLPKGMTEERFDRRRSAREALEDHFRQVE QNPAELDAMGDFYQQAYKLISSAGARKAFSLDAEPDSMLKLYGEYPKRSIGKQLMLARRLVEAGVRLVTVMYNGSQGWDN HVRIKDAVSEGLPAFDHAFSGLITDLDQRGLLDTTLVTVTSEFGRTPKVNENGGRDHWARAYSQVIAGGGITRGQIYGAT NATAAEPDRDPVTVENFLATVYHQLGINAEDRLLAPGGRPIDIVRDGKFVEGLCSAS
Sequences:
>Translated_457_residues MADQGISAECLKCSGPQYLTSFGRRSFIQVGLLSGLGLSLADLLRAGEVRPANLAGKRAEGRAKSVIQIILPGGLAHQES WDPKPEAPIEYRGPLGVVKTKIPGVVFSENLARTAQVADKITVVRSVTGRIPDHAQATYQMLTGYLPTPAIQHPAMGAVV AHEFGPKNNLPAWVGLPSVPAGAGTGYLSSKYGAFELGADPAQKNFQVRDISLPKGMTEERFDRRRSAREALEDHFRQVE QNPAELDAMGDFYQQAYKLISSAGARKAFSLDAEPDSMLKLYGEYPKRSIGKQLMLARRLVEAGVRLVTVMYNGSQGWDN HVRIKDAVSEGLPAFDHAFSGLITDLDQRGLLDTTLVTVTSEFGRTPKVNENGGRDHWARAYSQVIAGGGITRGQIYGAT NATAAEPDRDPVTVENFLATVYHQLGINAEDRLLAPGGRPIDIVRDGKFVEGLCSAS >Mature_456_residues ADQGISAECLKCSGPQYLTSFGRRSFIQVGLLSGLGLSLADLLRAGEVRPANLAGKRAEGRAKSVIQIILPGGLAHQESW DPKPEAPIEYRGPLGVVKTKIPGVVFSENLARTAQVADKITVVRSVTGRIPDHAQATYQMLTGYLPTPAIQHPAMGAVVA HEFGPKNNLPAWVGLPSVPAGAGTGYLSSKYGAFELGADPAQKNFQVRDISLPKGMTEERFDRRRSAREALEDHFRQVEQ NPAELDAMGDFYQQAYKLISSAGARKAFSLDAEPDSMLKLYGEYPKRSIGKQLMLARRLVEAGVRLVTVMYNGSQGWDNH VRIKDAVSEGLPAFDHAFSGLITDLDQRGLLDTTLVTVTSEFGRTPKVNENGGRDHWARAYSQVIAGGGITRGQIYGATN ATAAEPDRDPVTVENFLATVYHQLGINAEDRLLAPGGRPIDIVRDGKFVEGLCSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49353; Mature: 49221
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQGISAECLKCSGPQYLTSFGRRSFIQVGLLSGLGLSLADLLRAGEVRPANLAGKRAE CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC GRAKSVIQIILPGGLAHQESWDPKPEAPIEYRGPLGVVKTKIPGVVFSENLARTAQVADK CHHHHEEEEEECCCCCCCCCCCCCCCCCCEECCCCCEEHHCCCCEEEHHHHHHHHHHHHH ITVVRSVTGRIPDHAQATYQMLTGYLPTPAIQHPAMGAVVAHEFGPKNNLPAWVGLPSVP HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEECCCCCC AGAGTGYLSSKYGAFELGADPAQKNFQVRDISLPKGMTEERFDRRRSAREALEDHFRQVE CCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH QNPAELDAMGDFYQQAYKLISSAGARKAFSLDAEPDSMLKLYGEYPKRSIGKQLMLARRL CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHH VEAGVRLVTVMYNGSQGWDNHVRIKDAVSEGLPAFDHAFSGLITDLDQRGLLDTTLVTVT HHCCCEEEEEEECCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH SEFGRTPKVNENGGRDHWARAYSQVIAGGGITRGQIYGATNATAAEPDRDPVTVENFLAT HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH VYHQLGINAEDRLLAPGGRPIDIVRDGKFVEGLCSAS HHHHHCCCCCCCEECCCCCEEEEEECCHHHHHHHCCC >Mature Secondary Structure ADQGISAECLKCSGPQYLTSFGRRSFIQVGLLSGLGLSLADLLRAGEVRPANLAGKRAE CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC GRAKSVIQIILPGGLAHQESWDPKPEAPIEYRGPLGVVKTKIPGVVFSENLARTAQVADK CHHHHEEEEEECCCCCCCCCCCCCCCCCCEECCCCCEEHHCCCCEEEHHHHHHHHHHHHH ITVVRSVTGRIPDHAQATYQMLTGYLPTPAIQHPAMGAVVAHEFGPKNNLPAWVGLPSVP HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEECCCCCC AGAGTGYLSSKYGAFELGADPAQKNFQVRDISLPKGMTEERFDRRRSAREALEDHFRQVE CCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH QNPAELDAMGDFYQQAYKLISSAGARKAFSLDAEPDSMLKLYGEYPKRSIGKQLMLARRL CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHH VEAGVRLVTVMYNGSQGWDNHVRIKDAVSEGLPAFDHAFSGLITDLDQRGLLDTTLVTVT HHCCCEEEEEEECCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH SEFGRTPKVNENGGRDHWARAYSQVIAGGGITRGQIYGATNATAAEPDRDPVTVENFLAT HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH VYHQLGINAEDRLLAPGGRPIDIVRDGKFVEGLCSAS HHHHHCCCCCCCEECCCCCEEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA