| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624110
Identifier: 116624110
GI number: 116624110
Start: 6345997
End: 6347610
Strand: Reverse
Name: 116624110
Synonym: Acid_5025
Alternate gene names: NA
Gene position: 6347610-6345997 (Counterclockwise)
Preceding gene: 116624111
Following gene: 116624109
Centisome position: 63.69
GC content: 63.94
Gene sequence:
>1614_bases ATGACCAAGCAACAGGTCGAACAGGTCGCCGGGATCATTCTCGGCGGGCTCGCCGCAGTCGTAGGGGCCGCCCTGCTCGG CGGTGCAGTGCCAGCTCCCATCGCGCCCGGCAGCCTGCCCCGCATAGGCACCGTCGATGAACGCTTCCAATCTTTCAATA TCGAAATGGTGGAAGTTACCGGCGGCCGGTTCTGGAAGCCCTATGGCAAACAGGTAGACGCCATCCTGCAAGCGCAGGAG AAGGCGCGGAAACGGGGCGACAAGGCTCCGGCCGGCATGGATCCGGAACTGTATCAATACCGCGCGCCGATCGATCTGGC CAATCCGCGATTGCGCAAACTGGCGGCGGCACTGGGTCCGGCGTACCTTCGCGTCAGCGGCACCTGGGCCAACTCGACGT ATTTCCACGATTCCGAAAGCCAACCGCCGGCAACTCCGCCAGAGGGATTCGGCAGCGTGCTGACTCGCGCGCAGTGGAAG GGAGTGGTGGATTTTGCGCGCGCCGTCAACGCGAAGCTGATCACCTCATTCGCCACCAGCACCGGGACCCGGGACGAAAC CGGTGTCTGGACACCGCGTCAGGCCCGGCAGTTTCTGGATTACACGAAGTCGGTCAAGGGCAGCATCGCTGCCGCGGAGT TCATGAACGAACCGAACTTTGCCGTACTGGCGGGCGTTCCGAAGGGCTACGATGCAAAAGCGTATGCCCGCGACCTGGCG GTGTTCCTTCCGTTTGCCAAGAAGGAAGCGCCCGACATGGTGATACTCGGGCCCGGCTCCGTCGGCGAGGGCGGATCGCT GGTGAAGGAAGGAGCGAGCCTGCCGTTTCCGATGTTGAAATCCGAGGACCTGCTGGCCGCCACGGGTCCGGTCTTTGACG CGTTCTCGTATCATTTCTACGGAGCAGTCTCTCAGCGGTGCGCTTCCATGGGGCCGGGCGGCACGACTCCGGTCGACGCG CTCTCCGACGAGTGGCTGGCGCGCACCAATTCCGCCGAGGCGTACTACCGCGGAATGCGCGATCGCTTCAATTTCGGCAA GCCGATGTGGCTCACGGAAACGGCCGACGCAGCCTGCGGCGGGAACCCCTGGGGGGCAACGTTCCTCGATAGTTTCCGCT ACGTCAATCAGCTCGGCAGCCTCGCAAAGCGCATCGTGCAGGTAGTCGCGCAGAACACGCTTTCCGCCAGCGATTACGGC CTTGTGGATGAGAGAACGCTGACGCCGCGACCGAACTACTGGTCCGCGGTATTATGGCGCAGATTCATGGGCGCGACGGT GCTTGAGGCCGGCCCAGTGAGCGAACCGGCGATCCATGTCTACGCGCACTGCCTGGCGGGAGTTCCGGGTGGCGTCGCGC TGCTTGCGATCAACGCGGACCGCGGCGTGTACAAACCCATCGAAGTGGCGGTGGCGGCCGAGCGTTACACACTGACCGCG ACCGACCTCCTCGGTTCGGCGGTGCGGTTGAATGGCAGCGAATTGCGTTTGGGATATGACGGCGAACTGCCCCGTTTCGT CCCCGTTCCGTCCCCGGCCGGGCAGGTTATGCTGGCGCCCGCCAGCATCACGTTCCTCGCCATTCCGGCGGCCAACAATC AAAGCTGCCGGTAA
Upstream 100 bases:
>100_bases ATTATTCGAGTATCGTGAGGCCGGCTGAAAGCCTCACGTCAGGGTTAAACTTTGTATTTCTTGCGGCGTAATCCTGTTAT GGTGGTGGCTTCAATCCAGC
Downstream 100 bases:
>100_bases CGGTGATTTGCCGATTGGGATAGAATCGGGGAACACTTCTATGCCGCTCACGGCGGGCACCAAACTCGGGCCTTACGAAA TCGTCGGATCGCTCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTKQQVEQVAGIILGGLAAVVGAALLGGAVPAPIAPGSLPRIGTVDERFQSFNIEMVEVTGGRFWKPYGKQVDAILQAQE KARKRGDKAPAGMDPELYQYRAPIDLANPRLRKLAAALGPAYLRVSGTWANSTYFHDSESQPPATPPEGFGSVLTRAQWK GVVDFARAVNAKLITSFATSTGTRDETGVWTPRQARQFLDYTKSVKGSIAAAEFMNEPNFAVLAGVPKGYDAKAYARDLA VFLPFAKKEAPDMVILGPGSVGEGGSLVKEGASLPFPMLKSEDLLAATGPVFDAFSYHFYGAVSQRCASMGPGGTTPVDA LSDEWLARTNSAEAYYRGMRDRFNFGKPMWLTETADAACGGNPWGATFLDSFRYVNQLGSLAKRIVQVVAQNTLSASDYG LVDERTLTPRPNYWSAVLWRRFMGATVLEAGPVSEPAIHVYAHCLAGVPGGVALLAINADRGVYKPIEVAVAAERYTLTA TDLLGSAVRLNGSELRLGYDGELPRFVPVPSPAGQVMLAPASITFLAIPAANNQSCR
Sequences:
>Translated_537_residues MTKQQVEQVAGIILGGLAAVVGAALLGGAVPAPIAPGSLPRIGTVDERFQSFNIEMVEVTGGRFWKPYGKQVDAILQAQE KARKRGDKAPAGMDPELYQYRAPIDLANPRLRKLAAALGPAYLRVSGTWANSTYFHDSESQPPATPPEGFGSVLTRAQWK GVVDFARAVNAKLITSFATSTGTRDETGVWTPRQARQFLDYTKSVKGSIAAAEFMNEPNFAVLAGVPKGYDAKAYARDLA VFLPFAKKEAPDMVILGPGSVGEGGSLVKEGASLPFPMLKSEDLLAATGPVFDAFSYHFYGAVSQRCASMGPGGTTPVDA LSDEWLARTNSAEAYYRGMRDRFNFGKPMWLTETADAACGGNPWGATFLDSFRYVNQLGSLAKRIVQVVAQNTLSASDYG LVDERTLTPRPNYWSAVLWRRFMGATVLEAGPVSEPAIHVYAHCLAGVPGGVALLAINADRGVYKPIEVAVAAERYTLTA TDLLGSAVRLNGSELRLGYDGELPRFVPVPSPAGQVMLAPASITFLAIPAANNQSCR >Mature_536_residues TKQQVEQVAGIILGGLAAVVGAALLGGAVPAPIAPGSLPRIGTVDERFQSFNIEMVEVTGGRFWKPYGKQVDAILQAQEK ARKRGDKAPAGMDPELYQYRAPIDLANPRLRKLAAALGPAYLRVSGTWANSTYFHDSESQPPATPPEGFGSVLTRAQWKG VVDFARAVNAKLITSFATSTGTRDETGVWTPRQARQFLDYTKSVKGSIAAAEFMNEPNFAVLAGVPKGYDAKAYARDLAV FLPFAKKEAPDMVILGPGSVGEGGSLVKEGASLPFPMLKSEDLLAATGPVFDAFSYHFYGAVSQRCASMGPGGTTPVDAL SDEWLARTNSAEAYYRGMRDRFNFGKPMWLTETADAACGGNPWGATFLDSFRYVNQLGSLAKRIVQVVAQNTLSASDYGL VDERTLTPRPNYWSAVLWRRFMGATVLEAGPVSEPAIHVYAHCLAGVPGGVALLAINADRGVYKPIEVAVAAERYTLTAT DLLGSAVRLNGSELRLGYDGELPRFVPVPSPAGQVMLAPASITFLAIPAANNQSCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI94721347, Length=500, Percent_Identity=26.2, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI148746204, Length=500, Percent_Identity=26.2, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI261878505, Length=282, Percent_Identity=25.177304964539, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI261878501, Length=280, Percent_Identity=25.3571428571429, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI261878503, Length=280, Percent_Identity=25.3571428571429, Blast_Score=84, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57376; Mature: 57245
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQQVEQVAGIILGGLAAVVGAALLGGAVPAPIAPGSLPRIGTVDERFQSFNIEMVEVT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEC GGRFWKPYGKQVDAILQAQEKARKRGDKAPAGMDPELYQYRAPIDLANPRLRKLAAALGP CCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHCC AYLRVSGTWANSTYFHDSESQPPATPPEGFGSVLTRAQWKGVVDFARAVNAKLITSFATS EEEEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGTRDETGVWTPRQARQFLDYTKSVKGSIAAAEFMNEPNFAVLAGVPKGYDAKAYARDLA CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH VFLPFAKKEAPDMVILGPGSVGEGGSLVKEGASLPFPMLKSEDLLAATGPVFDAFSYHFY HEECHHCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH GAVSQRCASMGPGGTTPVDALSDEWLARTNSAEAYYRGMRDRFNFGKPMWLTETADAACG HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC GNPWGATFLDSFRYVNQLGSLAKRIVQVVAQNTLSASDYGLVDERTLTPRPNYWSAVLWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RFMGATVLEAGPVSEPAIHVYAHCLAGVPGGVALLAINADRGVYKPIEVAVAAERYTLTA HHHCCHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCEEEEH TDLLGSAVRLNGSELRLGYDGELPRFVPVPSPAGQVMLAPASITFLAIPAANNQSCR HHHHCHHEEECCCEEEECCCCCCCCEEECCCCCCCEEEECCEEEEEEEECCCCCCCC >Mature Secondary Structure TKQQVEQVAGIILGGLAAVVGAALLGGAVPAPIAPGSLPRIGTVDERFQSFNIEMVEVT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEC GGRFWKPYGKQVDAILQAQEKARKRGDKAPAGMDPELYQYRAPIDLANPRLRKLAAALGP CCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHCC AYLRVSGTWANSTYFHDSESQPPATPPEGFGSVLTRAQWKGVVDFARAVNAKLITSFATS EEEEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGTRDETGVWTPRQARQFLDYTKSVKGSIAAAEFMNEPNFAVLAGVPKGYDAKAYARDLA CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH VFLPFAKKEAPDMVILGPGSVGEGGSLVKEGASLPFPMLKSEDLLAATGPVFDAFSYHFY HEECHHCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH GAVSQRCASMGPGGTTPVDALSDEWLARTNSAEAYYRGMRDRFNFGKPMWLTETADAACG HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC GNPWGATFLDSFRYVNQLGSLAKRIVQVVAQNTLSASDYGLVDERTLTPRPNYWSAVLWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RFMGATVLEAGPVSEPAIHVYAHCLAGVPGGVALLAINADRGVYKPIEVAVAAERYTLTA HHHCCHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCEEEEH TDLLGSAVRLNGSELRLGYDGELPRFVPVPSPAGQVMLAPASITFLAIPAANNQSCR HHHHCHHEEECCCEEEECCCCCCCCEEECCCCCCCEEEECCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA