| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624105
Identifier: 116624105
GI number: 116624105
Start: 6336328
End: 6337209
Strand: Direct
Name: 116624105
Synonym: Acid_5020
Alternate gene names: NA
Gene position: 6336328-6337209 (Clockwise)
Preceding gene: 116624098
Following gene: 116624106
Centisome position: 63.58
GC content: 63.72
Gene sequence:
>882_bases ATGGACAGGACTAACACGTTGAAATCGATCACACAATCTTTGCGCGACAGACCGGCAGAGTTCGTACTCCTGCCTCCGAT CGGTGCCCCAATACCGGACGCTTTTGAAACAGTCGAGACCAGTGACCGCTTGCACGCCGAGTTACTCTCGTCCGCGCAGC GATTTCGAGGCGGGATCTACCTCCAGGACGGCGCCATCCGCCCGCAGCAGTTGACTGCGGACGGACGTCATGAGCTTCCC GTGGACGATGAGAGCTGGCACATTCTGACGCTGGACCACGAAGGTAGGATCTGCGCCTGCCTGCGCGTTCACCAGGAGAT GGCGGGCCGCGATTTCGAGCGCCTCCCGGTCTCGCAATCGGCGCTCACGCAGTGTCCCGATTGGGGCGGCAAATTGCGCC AGGCCGTGGAATCCGAGATCGCCGGCGCGCGGGATGCGCAACTCCATTTCGGCGACGTCGGCGGATGGGCCATCGCGCCC GAACGCCGCCGGACGCTGGAGCCCCTGCGCACCATCCTGGCTGGATATAGCCTGATGCAGCACTTGGGCGGAGTCGCGGG CATCGTCACCGCAACATGCAAACACGGTTCCTCTCAGATTCTCCGGAAGCTCGGCCTGCGCCCGCTCCAGGCCGGCGGCG AGACCATTCCCGGATATTACGACCCCCATTACGACTCGGAGATGGAAGTGCTGAGTTTCGATTCGCGCCGGCCCAACCCA CGCTACAAGGCGTGGATCGCGGAACTGCGGGGTGTGCTTTCGAGCGCGCCCGTGGTTCGCGCCGAACGGCGTTGCCGGCC GGCATCCATCACTCCCGCGTTTGTCCTCAGGCCCTGGACCCAGGTGTTCTTTTCCCGCCATGTACGACCGCTCGCAGGTT AA
Upstream 100 bases:
>100_bases GCAGGCCCACTGCACATTTCGGCGGTAGCCTGTCGATTTTTTATTCGCCAGGGGCAGCGGTCGAGGTGTGTTGTGGCCAG TTTACAGAGCCACCCAGGCA
Downstream 100 bases:
>100_bases TATTTATACTGGACTAAAGATCATCGGCCGCAGATCCGCATCGCTGTTAAAATTCCGGTAGCGAAAGGTCGCGACCCGGC TAATAAGGTCCCTCCTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MDRTNTLKSITQSLRDRPAEFVLLPPIGAPIPDAFETVETSDRLHAELLSSAQRFRGGIYLQDGAIRPQQLTADGRHELP VDDESWHILTLDHEGRICACLRVHQEMAGRDFERLPVSQSALTQCPDWGGKLRQAVESEIAGARDAQLHFGDVGGWAIAP ERRRTLEPLRTILAGYSLMQHLGGVAGIVTATCKHGSSQILRKLGLRPLQAGGETIPGYYDPHYDSEMEVLSFDSRRPNP RYKAWIAELRGVLSSAPVVRAERRCRPASITPAFVLRPWTQVFFSRHVRPLAG
Sequences:
>Translated_293_residues MDRTNTLKSITQSLRDRPAEFVLLPPIGAPIPDAFETVETSDRLHAELLSSAQRFRGGIYLQDGAIRPQQLTADGRHELP VDDESWHILTLDHEGRICACLRVHQEMAGRDFERLPVSQSALTQCPDWGGKLRQAVESEIAGARDAQLHFGDVGGWAIAP ERRRTLEPLRTILAGYSLMQHLGGVAGIVTATCKHGSSQILRKLGLRPLQAGGETIPGYYDPHYDSEMEVLSFDSRRPNP RYKAWIAELRGVLSSAPVVRAERRCRPASITPAFVLRPWTQVFFSRHVRPLAG >Mature_293_residues MDRTNTLKSITQSLRDRPAEFVLLPPIGAPIPDAFETVETSDRLHAELLSSAQRFRGGIYLQDGAIRPQQLTADGRHELP VDDESWHILTLDHEGRICACLRVHQEMAGRDFERLPVSQSALTQCPDWGGKLRQAVESEIAGARDAQLHFGDVGGWAIAP ERRRTLEPLRTILAGYSLMQHLGGVAGIVTATCKHGSSQILRKLGLRPLQAGGETIPGYYDPHYDSEMEVLSFDSRRPNP RYKAWIAELRGVLSSAPVVRAERRCRPASITPAFVLRPWTQVFFSRHVRPLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32626; Mature: 32626
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTNTLKSITQSLRDRPAEFVLLPPIGAPIPDAFETVETSDRLHAELLSSAQRFRGGIY CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEE LQDGAIRPQQLTADGRHELPVDDESWHILTLDHEGRICACLRVHQEMAGRDFERLPVSQS EECCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCCHH ALTQCPDWGGKLRQAVESEIAGARDAQLHFGDVGGWAIAPERRRTLEPLRTILAGYSLMQ HHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH HLGGVAGIVTATCKHGSSQILRKLGLRPLQAGGETIPGYYDPHYDSEMEVLSFDSRRPNP HHCCHHHHHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCH RYKAWIAELRGVLSSAPVVRAERRCRPASITPAFVLRPWTQVFFSRHVRPLAG HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDRTNTLKSITQSLRDRPAEFVLLPPIGAPIPDAFETVETSDRLHAELLSSAQRFRGGIY CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEE LQDGAIRPQQLTADGRHELPVDDESWHILTLDHEGRICACLRVHQEMAGRDFERLPVSQS EECCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCCHH ALTQCPDWGGKLRQAVESEIAGARDAQLHFGDVGGWAIAPERRRTLEPLRTILAGYSLMQ HHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH HLGGVAGIVTATCKHGSSQILRKLGLRPLQAGGETIPGYYDPHYDSEMEVLSFDSRRPNP HHCCHHHHHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCH RYKAWIAELRGVLSSAPVVRAERRCRPASITPAFVLRPWTQVFFSRHVRPLAG HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA