Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116624077

Identifier: 116624077

GI number: 116624077

Start: 6298116

End: 6298415

Strand: Reverse

Name: 116624077

Synonym: Acid_4991

Alternate gene names: NA

Gene position: 6298415-6298116 (Counterclockwise)

Preceding gene: 116624078

Following gene: 116624076

Centisome position: 63.2

GC content: 58.33

Gene sequence:

>300_bases
ATGGCTCAAGGTATGTTCGACGTTCCCTGTCCGTGCTGTAAGGCAGTGCTGAAGATCGATCCCGAGACGCGGGCCGTGAT
CGCCCATACTATCCCCGAGAAGCCTCCGGCAATTGAAGATCTGGCAGCCGAGGTTGCGAAGCTCAAGGGCGAGGGCGCAC
GGCGCGAGCAGCTATTCCAGAAGTCGTTCGAAGCCGAGAAATCGCACGGCAAGGTGCTGGAGAAGAAGTTCGACGAGTTG
TTCAAGCGCGCGAAGGAAAACCCGGATGTCAAACCACCGACGCGCGATATCGACCTGTAG

Upstream 100 bases:

>100_bases
CACCTCGCCTGAAATCCTCTAGCTCACCATACATCCTCACATCCGTCTTTCCGGGGCCTGTACTTCAGCAGGCCCCATTC
ATTCTCGTTTACGATAGAGC

Downstream 100 bases:

>100_bases
GCCGCCATGTTCCCATACGACGCCGAAATTCTTGCGGCCGTGCAGCAGACGCCTGGCTCAGTCGCGGATGTGCTTCACAC
GCTCGAAGCGATCGCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MAQGMFDVPCPCCKAVLKIDPETRAVIAHTIPEKPPAIEDLAAEVAKLKGEGARREQLFQKSFEAEKSHGKVLEKKFDEL
FKRAKENPDVKPPTRDIDL

Sequences:

>Translated_99_residues
MAQGMFDVPCPCCKAVLKIDPETRAVIAHTIPEKPPAIEDLAAEVAKLKGEGARREQLFQKSFEAEKSHGKVLEKKFDEL
FKRAKENPDVKPPTRDIDL
>Mature_98_residues
AQGMFDVPCPCCKAVLKIDPETRAVIAHTIPEKPPAIEDLAAEVAKLKGEGARREQLFQKSFEAEKSHGKVLEKKFDELF
KRAKENPDVKPPTRDIDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11086; Mature: 10955

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQGMFDVPCPCCKAVLKIDPETRAVIAHTIPEKPPAIEDLAAEVAKLKGEGARREQLFQ
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
KSFEAEKSHGKVLEKKFDELFKRAKENPDVKPPTRDIDL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQGMFDVPCPCCKAVLKIDPETRAVIAHTIPEKPPAIEDLAAEVAKLKGEGARREQLFQ
CCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
KSFEAEKSHGKVLEKKFDELFKRAKENPDVKPPTRDIDL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA