| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624074
Identifier: 116624074
GI number: 116624074
Start: 6295676
End: 6296365
Strand: Reverse
Name: 116624074
Synonym: Acid_4988
Alternate gene names: NA
Gene position: 6296365-6295676 (Counterclockwise)
Preceding gene: 116624076
Following gene: 116624073
Centisome position: 63.18
GC content: 61.74
Gene sequence:
>690_bases ATGAAGATCGGAAAGCTTTGCCTGATTGGTGTCATTGGTGTGTCCACAGGATCGTTGTACGGACGCGAAGAGACGGCTGC GACGCGCCTGCGGACGGCCTCGGAAGTGGTTACCGAGGTAATGAGCGCGCCAGATCGCGGCATCCCGCAGGAACTGCTGG AGAAGGCGCAGTGCATTGTGATCGTGCCGGGGCTCAAGAAAGCGGCCTTCATTGTGGGCGGCAAATACGGCCGGGGCTTC ATTTCCTGCCGCGCGAATGGTGGAACAGGCTGGTCTTCGCCGGCCGGTGTGAAGGTGGAAGGCGGCAGCTTCGGCTTCCA GATCGGCGGCTCCGAAACTGATGTCGTGATGTTGGTGATGAACAAGCGGGGCGCCGAGAAGTTACTCTCGAGTAAATTCA CGCTGGGCGCGGACGCATCGGTGGCGGCTGGGCCTGTCGGTCGTACGGCGGCGGCGGACACCGACCTCAAAATGCAAGCG GAGATCCTGACCTACTCGCGAGCGCGGGGAGTCTTCGCCGGAATCGCGTTGAATGGCGCCACGCTGCGTCCGGATAAGGA ATCCAACGTCGAAATCTACGGCGCAGGGCTTACCAACCGGCAGATCGTGATGGGCGGAACGCATAGGTCGCCGGTGGCGG CGGAAGGGCTCACGGCGAACCTGAACCGCTTCTCCGCGCATAAGGAATAA
Upstream 100 bases:
>100_bases TTGGCTTGACTTGCATCTATGATTAACCTATTCTAGTTAATGAGCTGAGGCAATCCCGCCCCATTCCTCCTCTTATCTAA CGTTTTTCACAGGGACAATT
Downstream 100 bases:
>100_bases CGATGACATCCCGCAGCTGCCGCCGCGTCCGATGGGCGCTCACGATGGCCGCCTGGTGCGCGATTCCGCTCGCGGGATTC GCCCAGACGCCGGAGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKIGKLCLIGVIGVSTGSLYGREETAATRLRTASEVVTEVMSAPDRGIPQELLEKAQCIVIVPGLKKAAFIVGGKYGRGF ISCRANGGTGWSSPAGVKVEGGSFGFQIGGSETDVVMLVMNKRGAEKLLSSKFTLGADASVAAGPVGRTAAADTDLKMQA EILTYSRARGVFAGIALNGATLRPDKESNVEIYGAGLTNRQIVMGGTHRSPVAAEGLTANLNRFSAHKE
Sequences:
>Translated_229_residues MKIGKLCLIGVIGVSTGSLYGREETAATRLRTASEVVTEVMSAPDRGIPQELLEKAQCIVIVPGLKKAAFIVGGKYGRGF ISCRANGGTGWSSPAGVKVEGGSFGFQIGGSETDVVMLVMNKRGAEKLLSSKFTLGADASVAAGPVGRTAAADTDLKMQA EILTYSRARGVFAGIALNGATLRPDKESNVEIYGAGLTNRQIVMGGTHRSPVAAEGLTANLNRFSAHKE >Mature_229_residues MKIGKLCLIGVIGVSTGSLYGREETAATRLRTASEVVTEVMSAPDRGIPQELLEKAQCIVIVPGLKKAAFIVGGKYGRGF ISCRANGGTGWSSPAGVKVEGGSFGFQIGGSETDVVMLVMNKRGAEKLLSSKFTLGADASVAAGPVGRTAAADTDLKMQA EILTYSRARGVFAGIALNGATLRPDKESNVEIYGAGLTNRQIVMGGTHRSPVAAEGLTANLNRFSAHKE
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=213, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=9e-22, Organism=Homo sapiens, GI227430336, Length=213, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321137, Length=177, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321804, Length=177, Percent_Identity=32.7683615819209, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23775; Mature: 23775
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGKLCLIGVIGVSTGSLYGREETAATRLRTASEVVTEVMSAPDRGIPQELLEKAQCIV CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEE IVPGLKKAAFIVGGKYGRGFISCRANGGTGWSSPAGVKVEGGSFGFQIGGSETDVVMLVM EECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEECCCCCCEEEEEE NKRGAEKLLSSKFTLGADASVAAGPVGRTAAADTDLKMQAEILTYSRARGVFAGIALNGA CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEEEEECCC TLRPDKESNVEIYGAGLTNRQIVMGGTHRSPVAAEGLTANLNRFSAHKE EECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MKIGKLCLIGVIGVSTGSLYGREETAATRLRTASEVVTEVMSAPDRGIPQELLEKAQCIV CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEE IVPGLKKAAFIVGGKYGRGFISCRANGGTGWSSPAGVKVEGGSFGFQIGGSETDVVMLVM EECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEECCCCCCEEEEEE NKRGAEKLLSSKFTLGADASVAAGPVGRTAAADTDLKMQAEILTYSRARGVFAGIALNGA CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEEEEECCC TLRPDKESNVEIYGAGLTNRQIVMGGTHRSPVAAEGLTANLNRFSAHKE EECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA