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The map label for this gene is 116624048

Identifier: 116624048

GI number: 116624048

Start: 6265300

End: 6266166

Strand: Direct

Name: 116624048

Synonym: Acid_4962

Alternate gene names: NA

Gene position: 6265300-6266166 (Clockwise)

Preceding gene: 116624046

Following gene: 116624049

Centisome position: 62.87

GC content: 59.05

Gene sequence:

>867_bases
ATGGCGAAGACCCGCATCGACAAATCACAACTCAGCGCGATCACCGACGAGATCGGTTACAGCACGGAGGAATCGATCGC
GTTCGCGCATCATTATGGATTGCAGAACGTGGAGATCCGCAATCCGCCGGGCAAGAAGGAATATTTTCAATTGCCGGAGG
CGGAGATCAAGACCGACGCCGACTGGTTCGCGAAGGAGGGATTGAAGGTCACGTTCATCAACACGAGCCTGATGAAGTTC
ACGTGGCCCGGGATGGAGGCGGCGCGCAAACGCACCGAGACGCCCGAGGCCCGCGACAAACGCCTGGCGGCGGAGAAGCT
GCGCTTCGACAATCGAATGGAGGATTTCCATAAGGCGATCCGCTGCGCGCAGATCATGGGCTGCGATAAGGTCCGCGTCT
TCGCCGGCACCCGTGTGGCCGATGTTAAGGCGGTGTTCCCGATGGTGGCCGATACGCTGGGCGAAATGTCGAAGCTAGCT
GAGCGCGAGAAGATCTACCTGCTGCTGGAGAATGAAGGCTCGCAAAACGTGGCGACCGCGGCCGAACTGGCCGACGTAAT
GAAGATGGTGCCTTCGAAGTGGGTCGGGTTCAACTGGGATCCGCACAACGCGTACGGCAAGGAACCGGCCTTCCCGGAAG
GGTACGGGCTGCTGCCAAGAGAGCGCATGCTCAACCTGCAGATCAAGGGCAAGGGCGTGATACCCGACAGTCCGGAGAAG
GAAGACTGGCGCGCGATTTTCGCGGCGCTGGCGAAGGACGGGTATGAAGGCAAGATCGGCCTCGAGACGCATCTCTTTGA
CGGCACGTTAATTCTGGCGGCGCACAAGTCAATGGATGAGATGATGAAGATAGTTCGCGAGATGTGA

Upstream 100 bases:

>100_bases
TGCTGCTCGTCCACTCCATATCTTCTATTACAATCATTTCATGACAAGGCGCGAATTACTGGCGGTTGGGGCGGCGTGTG
CGGCGTCCGCAACGAGGCTC

Downstream 100 bases:

>100_bases
GCGGCGAACTTTGAACGAGATGAAAAATACATTTTCGGCCGCATTCTGCATCGGCCTCGCGATCATCGCACTGGCGGTGG
GCGGAGTTTTCTTCATGCAG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MAKTRIDKSQLSAITDEIGYSTEESIAFAHHYGLQNVEIRNPPGKKEYFQLPEAEIKTDADWFAKEGLKVTFINTSLMKF
TWPGMEAARKRTETPEARDKRLAAEKLRFDNRMEDFHKAIRCAQIMGCDKVRVFAGTRVADVKAVFPMVADTLGEMSKLA
EREKIYLLLENEGSQNVATAAELADVMKMVPSKWVGFNWDPHNAYGKEPAFPEGYGLLPRERMLNLQIKGKGVIPDSPEK
EDWRAIFAALAKDGYEGKIGLETHLFDGTLILAAHKSMDEMMKIVREM

Sequences:

>Translated_288_residues
MAKTRIDKSQLSAITDEIGYSTEESIAFAHHYGLQNVEIRNPPGKKEYFQLPEAEIKTDADWFAKEGLKVTFINTSLMKF
TWPGMEAARKRTETPEARDKRLAAEKLRFDNRMEDFHKAIRCAQIMGCDKVRVFAGTRVADVKAVFPMVADTLGEMSKLA
EREKIYLLLENEGSQNVATAAELADVMKMVPSKWVGFNWDPHNAYGKEPAFPEGYGLLPRERMLNLQIKGKGVIPDSPEK
EDWRAIFAALAKDGYEGKIGLETHLFDGTLILAAHKSMDEMMKIVREM
>Mature_287_residues
AKTRIDKSQLSAITDEIGYSTEESIAFAHHYGLQNVEIRNPPGKKEYFQLPEAEIKTDADWFAKEGLKVTFINTSLMKFT
WPGMEAARKRTETPEARDKRLAAEKLRFDNRMEDFHKAIRCAQIMGCDKVRVFAGTRVADVKAVFPMVADTLGEMSKLAE
REKIYLLLENEGSQNVATAAELADVMKMVPSKWVGFNWDPHNAYGKEPAFPEGYGLLPRERMLNLQIKGKGVIPDSPEKE
DWRAIFAALAKDGYEGKIGLETHLFDGTLILAAHKSMDEMMKIVREM

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32594; Mature: 32463

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTRIDKSQLSAITDEIGYSTEESIAFAHHYGLQNVEIRNPPGKKEYFQLPEAEIKTDA
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHCCCH
DWFAKEGLKVTFINTSLMKFTWPGMEAARKRTETPEARDKRLAAEKLRFDNRMEDFHKAI
HHHHHCCCEEEEEECEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RCAQIMGCDKVRVFAGTRVADVKAVFPMVADTLGEMSKLAEREKIYLLLENEGSQNVATA
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH
AELADVMKMVPSKWVGFNWDPHNAYGKEPAFPEGYGLLPRERMLNLQIKGKGVIPDSPEK
HHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCH
EDWRAIFAALAKDGYEGKIGLETHLFDGTLILAAHKSMDEMMKIVREM
HHHHHHHHHHHCCCCCCEECEEEEEECCEEEEEEHHCHHHHHHHHHCC
>Mature Secondary Structure 
AKTRIDKSQLSAITDEIGYSTEESIAFAHHYGLQNVEIRNPPGKKEYFQLPEAEIKTDA
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHCCCH
DWFAKEGLKVTFINTSLMKFTWPGMEAARKRTETPEARDKRLAAEKLRFDNRMEDFHKAI
HHHHHCCCEEEEEECEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RCAQIMGCDKVRVFAGTRVADVKAVFPMVADTLGEMSKLAEREKIYLLLENEGSQNVATA
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH
AELADVMKMVPSKWVGFNWDPHNAYGKEPAFPEGYGLLPRERMLNLQIKGKGVIPDSPEK
HHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCH
EDWRAIFAALAKDGYEGKIGLETHLFDGTLILAAHKSMDEMMKIVREM
HHHHHHHHHHHCCCCCCEECEEEEEECCEEEEEEHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA