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The map label for this gene is 116623995

Identifier: 116623995

GI number: 116623995

Start: 6193317

End: 6194075

Strand: Reverse

Name: 116623995

Synonym: Acid_4907

Alternate gene names: NA

Gene position: 6194075-6193317 (Counterclockwise)

Preceding gene: 116624001

Following gene: 116623991

Centisome position: 62.15

GC content: 67.19

Gene sequence:

>759_bases
ATGCCGCCCGGAGCTACCACGGACCGTCTCCTCCGGATTTACCTGTGGCTCGCGTTCGGTATCACCTGGGGTATGGGCGG
ACTGGCACTCCTCGGCGGTGAGATCGGGCCCGGCCGCCCTACGCCGCTCCACCCGCTGTACTACGCGGCCGCCTTTGGCC
CTTCCATCGCCGGCGTCCTGATGGCGGGAGCCACCGAAGGCCGGGCGGGTGTCCGCCGTCTGCTCGCCCGCGTCGTTCCG
CGCGGGTCTTCCGTGCCGTGGTACGGTGCCGTCCTCGTCGGTTTCCCGGCACTGAATTTGGTCGCCGCCCGGCTCCTGGC
TCCCGGCTTCCTGGCGCACCTTCCCGAATGGCACCGGCTTTTGATCCTGTTGCCGGTTACGCTGGTTACCGATACCGGCC
CGCTGGGCGAGGAGTTCGGGTGGCGCGGCTTCTTTCTGCCGCGCCTGTTGCAGCGGCGGCTCCCACTTGCCGCGGCCCTC
ATCACCGGCGTGATCTGGTGGGCCTGGCACCTGCCCACGTTCTTCATCCCGGCGCTATCTCAGCACCGGCTCTCCATTGC
CGTTTTTCTCGTGAACAGCGTGGCGTTGAGCGTCATCATGACGTGGCTCTACCAGCGAACGCGGGGCGACTTGCTGCTCA
TGATCCTGGTCCACCTGGCGGCGAATTACTGCGGCGCGATCGGCGTTCCCTTCAGCGCCGAGGTGGGAGTGGAGGTCGCA
TGTGCGGCAGTGATCCTGGCATGCGGAGGACTTACCTGA

Upstream 100 bases:

>100_bases
CGCAGGTGGACGCTTCCCATGAATCCAAGGCCGAGCACGGCGATCTTCATTGGCATAGGTTAACAGGGGAACCGCGCACA
CGGGCACGCTATGCTTGGCT

Downstream 100 bases:

>100_bases
GCCGCATCCGCAGATACACGTTGACGCCCCAGGGGTGATCGCCGTAGTAGGGAGCGATGACGGGGGGGATGCCGTAGGCG
GTCACGTTTGCTCCTATGCC

Product: abortive infection protein

Products: NA

Alternate protein names: Methyltransferase Type; CAAX Amino Terminal Protease Family; CAAX-Like Membrane Endopeptidase

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPPGATTDRLLRIYLWLAFGITWGMGGLALLGGEIGPGRPTPLHPLYYAAAFGPSIAGVLMAGATEGRAGVRRLLARVVP
RGSSVPWYGAVLVGFPALNLVAARLLAPGFLAHLPEWHRLLILLPVTLVTDTGPLGEEFGWRGFFLPRLLQRRLPLAAAL
ITGVIWWAWHLPTFFIPALSQHRLSIAVFLVNSVALSVIMTWLYQRTRGDLLLMILVHLAANYCGAIGVPFSAEVGVEVA
CAAVILACGGLT

Sequences:

>Translated_252_residues
MPPGATTDRLLRIYLWLAFGITWGMGGLALLGGEIGPGRPTPLHPLYYAAAFGPSIAGVLMAGATEGRAGVRRLLARVVP
RGSSVPWYGAVLVGFPALNLVAARLLAPGFLAHLPEWHRLLILLPVTLVTDTGPLGEEFGWRGFFLPRLLQRRLPLAAAL
ITGVIWWAWHLPTFFIPALSQHRLSIAVFLVNSVALSVIMTWLYQRTRGDLLLMILVHLAANYCGAIGVPFSAEVGVEVA
CAAVILACGGLT
>Mature_251_residues
PPGATTDRLLRIYLWLAFGITWGMGGLALLGGEIGPGRPTPLHPLYYAAAFGPSIAGVLMAGATEGRAGVRRLLARVVPR
GSSVPWYGAVLVGFPALNLVAARLLAPGFLAHLPEWHRLLILLPVTLVTDTGPLGEEFGWRGFFLPRLLQRRLPLAAALI
TGVIWWAWHLPTFFIPALSQHRLSIAVFLVNSVALSVIMTWLYQRTRGDLLLMILVHLAANYCGAIGVPFSAEVGVEVAC
AAVILACGGLT

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27029; Mature: 26897

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPGATTDRLLRIYLWLAFGITWGMGGLALLGGEIGPGRPTPLHPLYYAAAFGPSIAGVL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHH
MAGATEGRAGVRRLLARVVPRGSSVPWYGAVLVGFPALNLVAARLLAPGFLAHLPEWHRL
HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHH
LILLPVTLVTDTGPLGEEFGWRGFFLPRLLQRRLPLAAALITGVIWWAWHLPTFFIPALS
HHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QHRLSIAVFLVNSVALSVIMTWLYQRTRGDLLLMILVHLAANYCGAIGVPFSAEVGVEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
CAAVILACGGLT
HHHHHHHHCCCC
>Mature Secondary Structure 
PPGATTDRLLRIYLWLAFGITWGMGGLALLGGEIGPGRPTPLHPLYYAAAFGPSIAGVL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHH
MAGATEGRAGVRRLLARVVPRGSSVPWYGAVLVGFPALNLVAARLLAPGFLAHLPEWHRL
HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHH
LILLPVTLVTDTGPLGEEFGWRGFFLPRLLQRRLPLAAALITGVIWWAWHLPTFFIPALS
HHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QHRLSIAVFLVNSVALSVIMTWLYQRTRGDLLLMILVHLAANYCGAIGVPFSAEVGVEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
CAAVILACGGLT
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA