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The map label for this gene is ymgE [H]

Identifier: 116623967

GI number: 116623967

Start: 6156982

End: 6157233

Strand: Reverse

Name: ymgE [H]

Synonym: Acid_4879

Alternate gene names: 116623967

Gene position: 6157233-6156982 (Counterclockwise)

Preceding gene: 116623973

Following gene: 116623966

Centisome position: 61.78

GC content: 55.95

Gene sequence:

>252_bases
ATGACGTTTCTATCGTGGATCGCGTTAGGCCTTCTGGCAGGCTTCATCGCAAGCAAAATCGTGAATAAGCATGGCGAGGG
TGCGTTTCTCGATATCCTGCTTGGCGTAGTGGGCGCCGTGGTTGGAGGCCTGATATTCGGCGTCTTCGGCGCTGGAGGAG
TGAGCGGCTTTAACCTGTACAGCCTGCTTGTGGCGGTAGTCGGCGCAATCCTCACACTGTTTGTCTACCATGCTGTTCAC
CGCGCCGTTTGA

Upstream 100 bases:

>100_bases
CCTGCCGTGCCGCAGCCGCATCAATCTTCGTGAGCGAACCAGATGCTGGTAACGCCGGCACCCGATCCGCATCGCCGACT
ATCGCGGTAAGGAGGGTTAA

Downstream 100 bases:

>100_bases
GCGCGGCGGCTTGACCTAAAAACTAACCCCTGAAAAACGACTGCAGGAGCAGACCATGAATCGAGTTGTGGCGATCTTTG
CACTTACCTGCGCCATCTCG

Product: transglycosylase-associated protein

Products: NA

Alternate protein names: Transglycosylase-associated gene protein [H]

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MTFLSWIALGLLAGFIASKIVNKHGEGAFLDILLGVVGAVVGGLIFGVFGAGGVSGFNLYSLLVAVVGAILTLFVYHAVH
RAV

Sequences:

>Translated_83_residues
MTFLSWIALGLLAGFIASKIVNKHGEGAFLDILLGVVGAVVGGLIFGVFGAGGVSGFNLYSLLVAVVGAILTLFVYHAVH
RAV
>Mature_82_residues
TFLSWIALGLLAGFIASKIVNKHGEGAFLDILLGVVGAVVGGLIFGVFGAGGVSGFNLYSLLVAVVGAILTLFVYHAVHR
AV

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

Organism=Escherichia coli, GI1787445, Length=84, Percent_Identity=51.1904761904762, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1788096, Length=81, Percent_Identity=54.320987654321, Blast_Score=59, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8487; Mature: 8356

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLSWIALGLLAGFIASKIVNKHGEGAFLDILLGVVGAVVGGLIFGVFGAGGVSGFNLY
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SLLVAVVGAILTLFVYHAVHRAV
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFLSWIALGLLAGFIASKIVNKHGEGAFLDILLGVVGAVVGGLIFGVFGAGGVSGFNLY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SLLVAVVGAILTLFVYHAVHRAV
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA