Click here to switch to the map view.

The map label for this gene is 116623964

Identifier: 116623964

GI number: 116623964

Start: 6153919

End: 6154848

Strand: Reverse

Name: 116623964

Synonym: Acid_4876

Alternate gene names: NA

Gene position: 6154848-6153919 (Counterclockwise)

Preceding gene: 116623965

Following gene: 116623963

Centisome position: 61.76

GC content: 62.04

Gene sequence:

>930_bases
ATGACTCGTCTCTCCGCGTTCGCATTGGCCGCGGCGGGTGTGGTGCTGCTGAACGTCCCTGTCAAGGCGGCGACTCCGGA
CGGGAGAGCATTCCCGTCCGCCGATGCCGCGGCGCAGGCACTTGTCGACGCCGCAAAGAGCGATGACACGGCCGCCTTGA
TCGAGATCCTCGGACCTTCGGCCAGGGGCATTGTGACGACGCGCGATTCGGTGGCCGACCGGAACTCCCGGAAGGTTTTC
ACGGCGCGCGCCGCCGAGAAGATGCGACTGGTGGCCAGTCACGGCAATCCGAAGAACAGGACGCTGGTGGTCGGCAAGGA
CGAGTGGCCCTTGCCGATCCCGATTGTCGAGCGCAACGGCCAATGGTACTTCGACACAGCGCAAGGCAGGGAGGAGATCC
TCACACGCCGCATCGGCAGCAACGAACTGGATGCGATCGAAGTATGCCGCGGGTTCGTGGAAGCGGAGAACCAATACGCG
GAGAAGAATCGGACCGCCAACCACATCCCTATCTACGCGCAGATGATCATCAGTTCTCCCGGGGAGCGGGATGGATTGTA
CTGGGACGCCAAGGGCGAGGGCGACGAGAGCCCGATCGGTGAGATCGTCGCGCGCGCTCTCGCCCAAGGCTACACGAATA
AGCACGAGCCGTATCGCGGCTACTACTTCAAGGTCTTGACCGCGCAGGGTCCGAGTGCTGCCGGAGGTGAGAAGAGTTAC
ATCAAAGACGGTGTGATGACCCGTGGATTCGCGTTAATTGCGTGGCCCGCCAACTACGGTTCGACCGGGATGATGACGTT
TGTCGTGGATAAAAGCGGGATAGTTTACCAGAAAGACCTGGGCCCGAAGACGGGCGAAGTCGCGTCCGGATATGCCGCCT
ATGATCCGGACCACACCTGGCATCCCGTCTCGGATGCAACGCGCCCTTGA

Upstream 100 bases:

>100_bases
CGCGGAGGCGGCGGCTTCGGCGGAGGCGGCCATAGGGGTGGTGGTGGCGGCGGACGCCGCAGATGATCACTGACCACACG
AGTAAACAGGAGCAAGCAAT

Downstream 100 bases:

>100_bases
GATTCCTGGGTCGTTTGAGCCGAAATCAACCCACGATTTCTTCTGCCTTTAGCCTCGTTGTTCCATCTCTTTCCATCACA
GTCGCCGCGCGGCATGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTRLSAFALAAAGVVLLNVPVKAATPDGRAFPSADAAAQALVDAAKSDDTAALIEILGPSARGIVTTRDSVADRNSRKVF
TARAAEKMRLVASHGNPKNRTLVVGKDEWPLPIPIVERNGQWYFDTAQGREEILTRRIGSNELDAIEVCRGFVEAENQYA
EKNRTANHIPIYAQMIISSPGERDGLYWDAKGEGDESPIGEIVARALAQGYTNKHEPYRGYYFKVLTAQGPSAAGGEKSY
IKDGVMTRGFALIAWPANYGSTGMMTFVVDKSGIVYQKDLGPKTGEVASGYAAYDPDHTWHPVSDATRP

Sequences:

>Translated_309_residues
MTRLSAFALAAAGVVLLNVPVKAATPDGRAFPSADAAAQALVDAAKSDDTAALIEILGPSARGIVTTRDSVADRNSRKVF
TARAAEKMRLVASHGNPKNRTLVVGKDEWPLPIPIVERNGQWYFDTAQGREEILTRRIGSNELDAIEVCRGFVEAENQYA
EKNRTANHIPIYAQMIISSPGERDGLYWDAKGEGDESPIGEIVARALAQGYTNKHEPYRGYYFKVLTAQGPSAAGGEKSY
IKDGVMTRGFALIAWPANYGSTGMMTFVVDKSGIVYQKDLGPKTGEVASGYAAYDPDHTWHPVSDATRP
>Mature_308_residues
TRLSAFALAAAGVVLLNVPVKAATPDGRAFPSADAAAQALVDAAKSDDTAALIEILGPSARGIVTTRDSVADRNSRKVFT
ARAAEKMRLVASHGNPKNRTLVVGKDEWPLPIPIVERNGQWYFDTAQGREEILTRRIGSNELDAIEVCRGFVEAENQYAE
KNRTANHIPIYAQMIISSPGERDGLYWDAKGEGDESPIGEIVARALAQGYTNKHEPYRGYYFKVLTAQGPSAAGGEKSYI
KDGVMTRGFALIAWPANYGSTGMMTFVVDKSGIVYQKDLGPKTGEVASGYAAYDPDHTWHPVSDATRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33392; Mature: 33261

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLSAFALAAAGVVLLNVPVKAATPDGRAFPSADAAAQALVDAAKSDDTAALIEILGPS
CCCHHHHHHHHCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCC
ARGIVTTRDSVADRNSRKVFTARAAEKMRLVASHGNPKNRTLVVGKDEWPLPIPIVERNG
CCCEEEECHHHCCCCCCEEEEHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCEEEECCC
QWYFDTAQGREEILTRRIGSNELDAIEVCRGFVEAENQYAEKNRTANHIPIYAQMIISSP
CEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
GERDGLYWDAKGEGDESPIGEIVARALAQGYTNKHEPYRGYYFKVLTAQGPSAAGGEKSY
CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHH
IKDGVMTRGFALIAWPANYGSTGMMTFVVDKSGIVYQKDLGPKTGEVASGYAAYDPDHTW
HHCCHHHCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCC
HPVSDATRP
CCCCCCCCC
>Mature Secondary Structure 
TRLSAFALAAAGVVLLNVPVKAATPDGRAFPSADAAAQALVDAAKSDDTAALIEILGPS
CCHHHHHHHHCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCC
ARGIVTTRDSVADRNSRKVFTARAAEKMRLVASHGNPKNRTLVVGKDEWPLPIPIVERNG
CCCEEEECHHHCCCCCCEEEEHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCEEEECCC
QWYFDTAQGREEILTRRIGSNELDAIEVCRGFVEAENQYAEKNRTANHIPIYAQMIISSP
CEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
GERDGLYWDAKGEGDESPIGEIVARALAQGYTNKHEPYRGYYFKVLTAQGPSAAGGEKSY
CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHH
IKDGVMTRGFALIAWPANYGSTGMMTFVVDKSGIVYQKDLGPKTGEVASGYAAYDPDHTW
HHCCHHHCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCC
HPVSDATRP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA