| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is comB [H]
Identifier: 116623954
GI number: 116623954
Start: 6144818
End: 6145552
Strand: Direct
Name: comB [H]
Synonym: Acid_4866
Alternate gene names: 116623954
Gene position: 6144818-6145552 (Clockwise)
Preceding gene: 116623953
Following gene: 116623955
Centisome position: 61.66
GC content: 63.95
Gene sequence:
>735_bases TTGCCGGAGTCCGTGCGCCGGTACCATCCGGAGTGGGCGATCGTCGCCGTCGATGTGATCAGGGCGACCACCACTGCGAT CACGGCCGCGGCGATGGGAAGGCGCTGTTTTCCGGCGCCCACCATCGCAGCGGCCCTCGCACTCGCCGGCGAATTCGAGC ATCCGCTCCTGGCCGGTGAATCCGGAGGGAAAATGCCGGCCGCGTTCGAAATGGACAACAGTCCGTCCCAACTCGCCGGC CGGAACGATATAGATCGGCCGCTAGTACTGGTTTCTTCCTCGGGTACGAAAGTAATTGATGAGGCGGCGGGCTGCGAAGC CATCTATCTTGCCTGCTACCGGAGTTACTCGGTTCTGGCGAGTTACCTGGACGGGCGCCACGACCGGGTGGCGGTGATCG GCGCGGGAAGTCTGGGTGAATTCAGGGAAGAAGACCAGATATGCTGCGCCTGGGTAGCCGCGCGCTTGATGGAGCAGGGC TACGTTCCCGAAAACCGCGAAACCACCGCAATAGTCGCCCGTTGGCGCGACGCGCCGCCGGAAGCCTGCCTCGGCAGCCG GAGCGTCGAGTTCCTGAAGCGCACGGGCCGGACCAACGACCTGGATTTCATCCTGGGCCACATTGACGATCTGCGCCACG TGTTCGCCGTTCGCAACGGGGAAGTCAAGATGATTTCCGGCCGCGCGCCCGTCAAACGGGACGAACAGCCGGAAGAGGCC GTGGTGGAGTGTTGA
Upstream 100 bases:
>100_bases CCGCACCTGGTAAAGGAAGAGATTCTGCGGGCATCGTAAGCAAGGGGTCCCAATTACAAGAAGGCGGTGAACTGTGCACA AATCGGTCGTGATTGATTAC
Downstream 100 bases:
>100_bases GAGAGGAGCCAACCATGAACCCTGCGACTCCCGTAGTGGTTCTCCAGTCGGGACATCACGGCGCGCTGGGCATTGTGCGC AGCCTGGGACGTCTGGGCGT
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPESVRRYHPEWAIVAVDVIRATTTAITAAAMGRRCFPAPTIAAALALAGEFEHPLLAGESGGKMPAAFEMDNSPSQLAG RNDIDRPLVLVSSSGTKVIDEAAGCEAIYLACYRSYSVLASYLDGRHDRVAVIGAGSLGEFREEDQICCAWVAARLMEQG YVPENRETTAIVARWRDAPPEACLGSRSVEFLKRTGRTNDLDFILGHIDDLRHVFAVRNGEVKMISGRAPVKRDEQPEEA VVEC
Sequences:
>Translated_244_residues MPESVRRYHPEWAIVAVDVIRATTTAITAAAMGRRCFPAPTIAAALALAGEFEHPLLAGESGGKMPAAFEMDNSPSQLAG RNDIDRPLVLVSSSGTKVIDEAAGCEAIYLACYRSYSVLASYLDGRHDRVAVIGAGSLGEFREEDQICCAWVAARLMEQG YVPENRETTAIVARWRDAPPEACLGSRSVEFLKRTGRTNDLDFILGHIDDLRHVFAVRNGEVKMISGRAPVKRDEQPEEA VVEC >Mature_243_residues PESVRRYHPEWAIVAVDVIRATTTAITAAAMGRRCFPAPTIAAALALAGEFEHPLLAGESGGKMPAAFEMDNSPSQLAGR NDIDRPLVLVSSSGTKVIDEAAGCEAIYLACYRSYSVLASYLDGRHDRVAVIGAGSLGEFREEDQICCAWVAARLMEQGY VPENRETTAIVARWRDAPPEACLGSRSVEFLKRTGRTNDLDFILGHIDDLRHVFAVRNGEVKMISGRAPVKRDEQPEEAV VEC
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 26577; Mature: 26446
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESVRRYHPEWAIVAVDVIRATTTAITAAAMGRRCFPAPTIAAALALAGEFEHPLLAGE CCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEECC SGGKMPAAFEMDNSPSQLAGRNDIDRPLVLVSSSGTKVIDEAAGCEAIYLACYRSYSVLA CCCCCCEEEECCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHH SYLDGRHDRVAVIGAGSLGEFREEDQICCAWVAARLMEQGYVPENRETTAIVARWRDAPP HHHCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCH EACLGSRSVEFLKRTGRTNDLDFILGHIDDLRHVFAVRNGEVKMISGRAPVKRDEQPEEA HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH VVEC HHCC >Mature Secondary Structure PESVRRYHPEWAIVAVDVIRATTTAITAAAMGRRCFPAPTIAAALALAGEFEHPLLAGE CCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEECC SGGKMPAAFEMDNSPSQLAGRNDIDRPLVLVSSSGTKVIDEAAGCEAIYLACYRSYSVLA CCCCCCEEEECCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHH SYLDGRHDRVAVIGAGSLGEFREEDQICCAWVAARLMEQGYVPENRETTAIVARWRDAPP HHHCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCH EACLGSRSVEFLKRTGRTNDLDFILGHIDDLRHVFAVRNGEVKMISGRAPVKRDEQPEEA HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH VVEC HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA