| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623942
Identifier: 116623942
GI number: 116623942
Start: 6130422
End: 6131378
Strand: Direct
Name: 116623942
Synonym: Acid_4854
Alternate gene names: NA
Gene position: 6130422-6131378 (Clockwise)
Preceding gene: 116623941
Following gene: 116623943
Centisome position: 61.52
GC content: 59.98
Gene sequence:
>957_bases GTGGCAGCATCAGCACAACTGCTTGTGATCGGCACCGCATTGGCGATAGCGGCGTCGCCCGTTCTGGCGGTGGAGGGGGC CGTTGGCCGAACGCTGCCGGGCGTATGGATCATGCCGCAGGCGGGCGTGGTGAGCCCGAAACCCGGGTTCAGGTTCACGC TGCTGCCGATTGGCTATATGGGCTCGATATCGAAGGACCACCTGGTGCCGATCGCCGGCACCCTGGTCGCGAATGTCTCG GCCGATGTCAGCGCGAACTACGTGGTTCCGCAATACGTTTATAAGACCGAGCTTCCCAAGATCAGCATTGCCTCCACGTT CATGGCGCCGGTCAACTGGGTCGGCGTCGATGCCAGCGGGCAACTGAATGAGGCCACGCGGAATAGAAGCAACGCGAATG CGGGGCTCGCGGATATTATCATCCAGCCGCTCACGGTCGGGATCCATTTTAGCGAGACCAACAATCTCGCCGTCAGCGCC ATGATCTTCGCCCCCACAGGCGCATACAACCGCGGCAACCTGTCGAACGTGGGAATGGGCGTATGGACGTTCATGCCGAA TATCGCGCACACAATCATGTGGGAGAAGCGCGGCCTGGAACTCGACAACCTCGTGGGCTTTGACATCTACGCCCGAAATC CAAACACTCAATACAAGAGCGGCACAGTCTTCCACTGGGATGCGATGCTCGTGCAGTATCTATCCAAGAGAGTGGGATTC GGCGTCATCGGGTCCAACATCACGCAGATCACGAACGACACCAGCAGCGGCCCCTTTGCCAGCACCTTGCATGGGTTCGA GGGCCGCGCGTGGGGCGCTGGGCCGATGGCGCTCTACGTGGCGAAGCCCGAAAAGCCCGGAGTGACGATTCAGGTCCGCT GGGTCCCCGAATTCGGAGTGACAAACCTGTTAAGCGGCAACACTCTCCTGCTTGGCCTTTCCATTCAGTTCAAGTAA
Upstream 100 bases:
>100_bases GCCCGTCAAAAATAAGTAGAGCGAACGATGGCTCCGGTGAATCCGGTGAGGAGTAAGCGATAAACGTCCCCGGCGAAGCG GGCGAAAAACGGAGATCATC
Downstream 100 bases:
>100_bases GACCGCAGCTTCCCCCCCGCGATCGATGTTCACTCGAGGGCCGCGCCATAGCGGCCCTTCCATCCCGTAATAATCCACTC GCCGACATGCTCTGCTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAASAQLLVIGTALAIAASPVLAVEGAVGRTLPGVWIMPQAGVVSPKPGFRFTLLPIGYMGSISKDHLVPIAGTLVANVS ADVSANYVVPQYVYKTELPKISIASTFMAPVNWVGVDASGQLNEATRNRSNANAGLADIIIQPLTVGIHFSETNNLAVSA MIFAPTGAYNRGNLSNVGMGVWTFMPNIAHTIMWEKRGLELDNLVGFDIYARNPNTQYKSGTVFHWDAMLVQYLSKRVGF GVIGSNITQITNDTSSGPFASTLHGFEGRAWGAGPMALYVAKPEKPGVTIQVRWVPEFGVTNLLSGNTLLLGLSIQFK
Sequences:
>Translated_318_residues MAASAQLLVIGTALAIAASPVLAVEGAVGRTLPGVWIMPQAGVVSPKPGFRFTLLPIGYMGSISKDHLVPIAGTLVANVS ADVSANYVVPQYVYKTELPKISIASTFMAPVNWVGVDASGQLNEATRNRSNANAGLADIIIQPLTVGIHFSETNNLAVSA MIFAPTGAYNRGNLSNVGMGVWTFMPNIAHTIMWEKRGLELDNLVGFDIYARNPNTQYKSGTVFHWDAMLVQYLSKRVGF GVIGSNITQITNDTSSGPFASTLHGFEGRAWGAGPMALYVAKPEKPGVTIQVRWVPEFGVTNLLSGNTLLLGLSIQFK >Mature_317_residues AASAQLLVIGTALAIAASPVLAVEGAVGRTLPGVWIMPQAGVVSPKPGFRFTLLPIGYMGSISKDHLVPIAGTLVANVSA DVSANYVVPQYVYKTELPKISIASTFMAPVNWVGVDASGQLNEATRNRSNANAGLADIIIQPLTVGIHFSETNNLAVSAM IFAPTGAYNRGNLSNVGMGVWTFMPNIAHTIMWEKRGLELDNLVGFDIYARNPNTQYKSGTVFHWDAMLVQYLSKRVGFG VIGSNITQITNDTSSGPFASTLHGFEGRAWGAGPMALYVAKPEKPGVTIQVRWVPEFGVTNLLSGNTLLLGLSIQFK
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33864; Mature: 33733
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASAQLLVIGTALAIAASPVLAVEGAVGRTLPGVWIMPQAGVVSPKPGFRFTLLPIGYM CCCCCEEEEEEEEHHHHCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCC GSISKDHLVPIAGTLVANVSADVSANYVVPQYVYKTELPKISIASTFMAPVNWVGVDASG CCCCCCCEEEEEEEEEEECCCCCCCCEECCCCHHHCCCCCEEEHHHECCCCEEEEECCCC QLNEATRNRSNANAGLADIIIQPLTVGIHFSETNNLAVSAMIFAPTGAYNRGNLSNVGMG CCCHHHCCCCCCCCCHHHHEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCH VWTFMPNIAHTIMWEKRGLELDNLVGFDIYARNPNTQYKSGTVFHWDAMLVQYLSKRVGF HHHHHHHHHHHHEECCCCCCHHHEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCC GVIGSNITQITNDTSSGPFASTLHGFEGRAWGAGPMALYVAKPEKPGVTIQVRWVPEFGV EEECCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCC TNLLSGNTLLLGLSIQFK CEEECCCEEEEEEEEEEC >Mature Secondary Structure AASAQLLVIGTALAIAASPVLAVEGAVGRTLPGVWIMPQAGVVSPKPGFRFTLLPIGYM CCCCEEEEEEEEHHHHCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCC GSISKDHLVPIAGTLVANVSADVSANYVVPQYVYKTELPKISIASTFMAPVNWVGVDASG CCCCCCCEEEEEEEEEEECCCCCCCCEECCCCHHHCCCCCEEEHHHECCCCEEEEECCCC QLNEATRNRSNANAGLADIIIQPLTVGIHFSETNNLAVSAMIFAPTGAYNRGNLSNVGMG CCCHHHCCCCCCCCCHHHHEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCH VWTFMPNIAHTIMWEKRGLELDNLVGFDIYARNPNTQYKSGTVFHWDAMLVQYLSKRVGF HHHHHHHHHHHHEECCCCCCHHHEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCC GVIGSNITQITNDTSSGPFASTLHGFEGRAWGAGPMALYVAKPEKPGVTIQVRWVPEFGV EEECCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCC TNLLSGNTLLLGLSIQFK CEEECCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA