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The map label for this gene is 116623933

Identifier: 116623933

GI number: 116623933

Start: 6120313

End: 6120789

Strand: Direct

Name: 116623933

Synonym: Acid_4845

Alternate gene names: NA

Gene position: 6120313-6120789 (Clockwise)

Preceding gene: 116623930

Following gene: 116623941

Centisome position: 61.41

GC content: 62.89

Gene sequence:

>477_bases
ATGCAAGAGATAACTGGCGGGGCCGACCAACGGTTGAAAGAACTTGGCATCAACCTTCCTGCACCACCTGAGCCGTTCGG
CATGTATGCGGAAGCGGTGCAGACCGGCGCGCTGCTTTTCTTGAGCGGGATGCTTCCGACGGAGGGCCGGAGCGCAACAT
TCATTGGGCGCGTGGGCGCTGAGCTGGATGTGGAAGCCGGACGCAAAGCGGCTCGCCTGGCGGCGTTCAACGTCCTGGCT
GTGGCGCGGCAGCATTTGGGGTCGCTCGACCGGGTGACGCGAGTCGTCCGGCTCAGCGTCTCGGTGGCAACGTCCGGGGA
CGTTCGCGATCAGCCGAGGGTCGCCGATGGCGCTTCGGAGCTGCTGCAAGAGGTCTTCGGAAAAGAAAAGAATCCTAGCC
GGATGGTCTACGGAGTGGCAAGCTTGCCGCTCGGCGTACCGGTCGAACTGGAAGTCATCTTCGAAGTCGGGCCGTAA

Upstream 100 bases:

>100_bases
ACCAGCACACAGGCGAGTTGCAAATGTGGCGCGTCGCGCATAGCGTGCGATTTCGCGCGTGATAGACTTCCAATGTTCGG
TGCTGAAAGGCGGTGACGTC

Downstream 100 bases:

>100_bases
GGGCTCACTTGTCCTTTTTGGTTGGCGGCTTTTTTCCGGGCGCGTCTTCCTCGCCCGGCGGAGGGGCGCTGGTGTTGCTA
ACGCCGGCGGGTTTCCAGCC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Endoribonuclease; Translation Initiation Inhibitor Protein; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; YjgF Family Translation Initiation Inhibitor; Transcription Regulator; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQEITGGADQRLKELGINLPAPPEPFGMYAEAVQTGALLFLSGMLPTEGRSATFIGRVGAELDVEAGRKAARLAAFNVLA
VARQHLGSLDRVTRVVRLSVSVATSGDVRDQPRVADGASELLQEVFGKEKNPSRMVYGVASLPLGVPVELEVIFEVGP

Sequences:

>Translated_158_residues
MQEITGGADQRLKELGINLPAPPEPFGMYAEAVQTGALLFLSGMLPTEGRSATFIGRVGAELDVEAGRKAARLAAFNVLA
VARQHLGSLDRVTRVVRLSVSVATSGDVRDQPRVADGASELLQEVFGKEKNPSRMVYGVASLPLGVPVELEVIFEVGP
>Mature_158_residues
MQEITGGADQRLKELGINLPAPPEPFGMYAEAVQTGALLFLSGMLPTEGRSATFIGRVGAELDVEAGRKAARLAAFNVLA
VARQHLGSLDRVTRVVRLSVSVATSGDVRDQPRVADGASELLQEVFGKEKNPSRMVYGVASLPLGVPVELEVIFEVGP

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16740; Mature: 16740

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEITGGADQRLKELGINLPAPPEPFGMYAEAVQTGALLFLSGMLPTEGRSATFIGRVGA
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
ELDVEAGRKAARLAAFNVLAVARQHLGSLDRVTRVVRLSVSVATSGDVRDQPRVADGASE
EEEHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHH
LLQEVFGKEKNPSRMVYGVASLPLGVPVELEVIFEVGP
HHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQEITGGADQRLKELGINLPAPPEPFGMYAEAVQTGALLFLSGMLPTEGRSATFIGRVGA
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
ELDVEAGRKAARLAAFNVLAVARQHLGSLDRVTRVVRLSVSVATSGDVRDQPRVADGASE
EEEHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHH
LLQEVFGKEKNPSRMVYGVASLPLGVPVELEVIFEVGP
HHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA