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The map label for this gene is ybhB [C]

Identifier: 116623929

GI number: 116623929

Start: 6115491

End: 6116075

Strand: Reverse

Name: ybhB [C]

Synonym: Acid_4841

Alternate gene names: 116623929

Gene position: 6116075-6115491 (Counterclockwise)

Preceding gene: 116623931

Following gene: 116623927

Centisome position: 61.37

GC content: 64.62

Gene sequence:

>585_bases
ATGCAATTGATCCTCTGCGTGTCCGCGACTCTCTTTCTGGCCGCCCTGCTCTCTGCTCAAGGCCCGCCTGCCGCCCCCCG
GCCCATGACGTTGGCAATTCCGGGATTTCCCGACGGTGGCCAGATCCCCGTCAAGTACAGTCAGGCCGCCCCCGGCGTTG
CCCCCGGCGAGGGTACCTCCCCGGCGATGACCTGGGCCAATGCGCCTGCCGGGACGCAGAGCTTCCTCCTCCACATGCAC
GATCTGGATCTCGCCCGCAACAAGACCACGGATGATCAGGTTCACTGGGTCTTCTGGAATATTCCGGCGAGCGCGACCGG
CTTGCCCGAAGGCGTACCCAAGGGTTCCCAGCTCCCTGACGGCAGCTATCAGATCAGCGTCACCGGGCCCATGTACCGCG
GACCCGGAGCCGCCGCCAACGGTCCGCTCCACCATTACGTCTTCGAGCTCTACGCGCTGGACACGAAGCTGGACGTGAAA
CCGACGTCCGACGCCTTCGAAACCCGTGCCAATGTGATCAAGGCCATTCAGGGCCACATCCTCGCGAAAGCCGTCTACGG
TGGCCTCTTTCGCCGCCCCCAGTGA

Upstream 100 bases:

>100_bases
CCGAAAAAAACTAGCAACACCCGTTGAGTGTATCGGCCCGCCCATATTGGGTCAACGATCTGTGGGTGAAAGCGGGCCCG
TTCCAAGCTAGGATAGTCCC

Downstream 100 bases:

>100_bases
TCGCTCCAAAATGGAAGGGCCGGCTTCCGGAGTAACAATCCGTGAGCCGGCCCAAACCACGAACAACGGTCCGATCTTAC
CTTAGAACGCGAGCTTTAGC

Product: PBP family phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQLILCVSATLFLAALLSAQGPPAAPRPMTLAIPGFPDGGQIPVKYSQAAPGVAPGEGTSPAMTWANAPAGTQSFLLHMH
DLDLARNKTTDDQVHWVFWNIPASATGLPEGVPKGSQLPDGSYQISVTGPMYRGPGAAANGPLHHYVFELYALDTKLDVK
PTSDAFETRANVIKAIQGHILAKAVYGGLFRRPQ

Sequences:

>Translated_194_residues
MQLILCVSATLFLAALLSAQGPPAAPRPMTLAIPGFPDGGQIPVKYSQAAPGVAPGEGTSPAMTWANAPAGTQSFLLHMH
DLDLARNKTTDDQVHWVFWNIPASATGLPEGVPKGSQLPDGSYQISVTGPMYRGPGAAANGPLHHYVFELYALDTKLDVK
PTSDAFETRANVIKAIQGHILAKAVYGGLFRRPQ
>Mature_194_residues
MQLILCVSATLFLAALLSAQGPPAAPRPMTLAIPGFPDGGQIPVKYSQAAPGVAPGEGTSPAMTWANAPAGTQSFLLHMH
DLDLARNKTTDDQVHWVFWNIPASATGLPEGVPKGSQLPDGSYQISVTGPMYRGPGAAANGPLHHYVFELYALDTKLDVK
PTSDAFETRANVIKAIQGHILAKAVYGGLFRRPQ

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=165, Percent_Identity=32.1212121212121, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20511; Mature: 20511

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLILCVSATLFLAALLSAQGPPAAPRPMTLAIPGFPDGGQIPVKYSQAAPGVAPGEGTS
CEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCC
PAMTWANAPAGTQSFLLHMHDLDLARNKTTDDQVHWVFWNIPASATGLPEGVPKGSQLPD
CCEEECCCCCCHHHHEEEHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
GSYQISVTGPMYRGPGAAANGPLHHYVFELYALDTKLDVKPTSDAFETRANVIKAIQGHI
CCEEEEECCCCCCCCCCCCCCCHHHHHEEHHEECCEECCCCCCHHHHHHHHHHHHHHHHH
LAKAVYGGLFRRPQ
HHHHHHHHHHCCCC
>Mature Secondary Structure
MQLILCVSATLFLAALLSAQGPPAAPRPMTLAIPGFPDGGQIPVKYSQAAPGVAPGEGTS
CEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCC
PAMTWANAPAGTQSFLLHMHDLDLARNKTTDDQVHWVFWNIPASATGLPEGVPKGSQLPD
CCEEECCCCCCHHHHEEEHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
GSYQISVTGPMYRGPGAAANGPLHHYVFELYALDTKLDVKPTSDAFETRANVIKAIQGHI
CCEEEEECCCCCCCCCCCCCCCHHHHHEEHHEECCEECCCCCCHHHHHHHHHHHHHHHHH
LAKAVYGGLFRRPQ
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]