| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623914
Identifier: 116623914
GI number: 116623914
Start: 6096727
End: 6098655
Strand: Direct
Name: 116623914
Synonym: Acid_4826
Alternate gene names: NA
Gene position: 6096727-6098655 (Clockwise)
Preceding gene: 116623913
Following gene: 116623916
Centisome position: 61.18
GC content: 64.64
Gene sequence:
>1929_bases ATGTCCGAGACGCCAACGCCCCTTCCCGCGAATGCATCGCTGGAACAACTGCAAAAACAGGCCAAAGAACGGGTGCGCGC ATTACGCGCCGCCGGAGATTCCGGCGCCATGCTGGCCGACGCCCAGTTCGCGATCGCGCGCGAGCACGGCTTTGCGACCT GGGCGAAACTGAAGCAGCACATTCAGTCCCTGCGCCCGCCGGGGATCGAGCCCTTCGAACGGCTCGCGACCGATCTGGCC GCGGCGTACACGTCGGGCGACGAAAGGATCGTGCGCGCCATCAACGCCGCCTCCGGCACCTCGTTTCCCACCGACTTTCA CGATCCGGAGAAAGTGCGCCAGCGCATGCCTGCATGGTACGCATCCGAGACACGCTCGCCCGAACTGGCGATCCTGGATG CGCGCCAGATGGTGGCGCACGCTTATGGTTTCGAGAATTGGACGGCATTCGCGGCGAGCCTTACGCAGCCGGCGGCCGAT CCGCGGTCGGCGCCCGTCTTCCTGCATACCCGGCCGCCGTTCTATTCGATCGATTGGCGGGAAAATCGCCTGACTGCGCG CGGCCCACAGACTCGCAAGGACTGGGACGAGATCTTCGCCATTGTCGAGGAGTACGGCATTTCCAGGCTGGAGGCCGGCG GAATCACCGATGACGCCATGAAGGGTCTGGCGGAGCTGGAGTGCGTCACGCACCTCAACGTCGGCGGATCGCAGGGGCTG ACCGACGAGGGCGCGCAGGAGCTGCGGCGCATGCCGCAACTGCTCGACCTGGAAATCGGCGGCTGGCACACGAAGTTGAC GGACCGCGCTTTCGAACCGCTGCGGCAGCTCACGCGACTGCGTCAGTTCAAATCCTGCTGGACGCAAGGCTTCAACGACG CTGCCGCCGCGCACCTGACGCCATGCGAATGCCTGGAGACCGTGAACGTGATTGGATCCACGGCCGGCGATGGCCTGATT CGTGCACTGGACGGCAAGGCGGCACTGCGTTTTCTCGATACCGGGCGGGGCGTGACCGACGCGGGAATTCCCGACCTGCA CCGGATCCCGGCCTTCGCCAAGTGGCTCGGCGGCGAGATTGAGGTCGGGCTGATGGGCGCCGCAAAGCTGCCGAACCGGC TAATGATTGATGGCGAGTTCACGGATACAGGGCTCGCCGCGCTCGAGGGGCTGGAAGGCGTTGCGGCGCTTTCATTCTTC GGGCATTCGAACGCATTCACGGCGGCGGGTCTCGAGCCGTTGCGCCGCCTGCCGAGGCTCGAAGTCTTCGGTATCGACGG AGACCAGTGCGGCGACGAGGCCATGCGCCAGATTGCGGCGATCCCACGGCTGCGGCAACTGCAGGCACAGGGGGCAATCG CGGGCGATTCGGGGTGGGAGGCGCTCAGCCGCTCGCAAACGCTCGAATACATCTGGGGCCGCGAGTGCCCGAACTTCGCG AGCCGCGGATTCATCGCGCTTGCCCGTTTACCGTCACTCCGAGGTATGGGAATCAGCTGCAAGCTGGTGGACGATGGCGC CCTGGCGGCGTTGCCGGGCTTTCCGCGGTTGCGCCAATTCGTCTCGATTGACGTGAGCGATCACGGTTTCCGCCACGTGG GCCGCTGTGAAAATCTGGAGGTGCTGTATTGCATGTATTGCCGGGACACCGGCGACGCCGCCACGGAGGATATCGGCGGG CTCCGGAAACTGCGAACGTATTATGCGGGGATGACGCAGATCACCGATCGCAGCCTGGAAATTCTCGGCGGCATGAAGGC CTGCGAGAAACTGGAGTTCTGGCAGTGCATGGCGATCACGGATGCCGGTGTGGCGCGCCTGGCGTCCCTGCCGCGGCTGA GGGAGATCGGGATCCATCAATCGCCCAAGGTTTCGAGGAAGATTACACAACTGTTTCGTGAAGGCGTGCGCGTGGACTAC TCGGGTTGA
Upstream 100 bases:
>100_bases CGGGAAAGGGCCGAGCCCACCGAGCACGCAACCAGGCTTCGTATTTTGCGATCTTCTTTCCGCCCGCCGCGCGGACGCGG GCCAATGAAAGGAGATCGTT
Downstream 100 bases:
>100_bases GTCCGGGGATGGATCAGGTCAGCGGTAGAAAACATCCTTCGCGTGGCCGGGTAAATCCTGCAACGCCTGGGCCTGAAGTT CGTACTTCACCCGGTCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MSETPTPLPANASLEQLQKQAKERVRALRAAGDSGAMLADAQFAIAREHGFATWAKLKQHIQSLRPPGIEPFERLATDLA AAYTSGDERIVRAINAASGTSFPTDFHDPEKVRQRMPAWYASETRSPELAILDARQMVAHAYGFENWTAFAASLTQPAAD PRSAPVFLHTRPPFYSIDWRENRLTARGPQTRKDWDEIFAIVEEYGISRLEAGGITDDAMKGLAELECVTHLNVGGSQGL TDEGAQELRRMPQLLDLEIGGWHTKLTDRAFEPLRQLTRLRQFKSCWTQGFNDAAAAHLTPCECLETVNVIGSTAGDGLI RALDGKAALRFLDTGRGVTDAGIPDLHRIPAFAKWLGGEIEVGLMGAAKLPNRLMIDGEFTDTGLAALEGLEGVAALSFF GHSNAFTAAGLEPLRRLPRLEVFGIDGDQCGDEAMRQIAAIPRLRQLQAQGAIAGDSGWEALSRSQTLEYIWGRECPNFA SRGFIALARLPSLRGMGISCKLVDDGALAALPGFPRLRQFVSIDVSDHGFRHVGRCENLEVLYCMYCRDTGDAATEDIGG LRKLRTYYAGMTQITDRSLEILGGMKACEKLEFWQCMAITDAGVARLASLPRLREIGIHQSPKVSRKITQLFREGVRVDY SG
Sequences:
>Translated_642_residues MSETPTPLPANASLEQLQKQAKERVRALRAAGDSGAMLADAQFAIAREHGFATWAKLKQHIQSLRPPGIEPFERLATDLA AAYTSGDERIVRAINAASGTSFPTDFHDPEKVRQRMPAWYASETRSPELAILDARQMVAHAYGFENWTAFAASLTQPAAD PRSAPVFLHTRPPFYSIDWRENRLTARGPQTRKDWDEIFAIVEEYGISRLEAGGITDDAMKGLAELECVTHLNVGGSQGL TDEGAQELRRMPQLLDLEIGGWHTKLTDRAFEPLRQLTRLRQFKSCWTQGFNDAAAAHLTPCECLETVNVIGSTAGDGLI RALDGKAALRFLDTGRGVTDAGIPDLHRIPAFAKWLGGEIEVGLMGAAKLPNRLMIDGEFTDTGLAALEGLEGVAALSFF GHSNAFTAAGLEPLRRLPRLEVFGIDGDQCGDEAMRQIAAIPRLRQLQAQGAIAGDSGWEALSRSQTLEYIWGRECPNFA SRGFIALARLPSLRGMGISCKLVDDGALAALPGFPRLRQFVSIDVSDHGFRHVGRCENLEVLYCMYCRDTGDAATEDIGG LRKLRTYYAGMTQITDRSLEILGGMKACEKLEFWQCMAITDAGVARLASLPRLREIGIHQSPKVSRKITQLFREGVRVDY SG >Mature_641_residues SETPTPLPANASLEQLQKQAKERVRALRAAGDSGAMLADAQFAIAREHGFATWAKLKQHIQSLRPPGIEPFERLATDLAA AYTSGDERIVRAINAASGTSFPTDFHDPEKVRQRMPAWYASETRSPELAILDARQMVAHAYGFENWTAFAASLTQPAADP RSAPVFLHTRPPFYSIDWRENRLTARGPQTRKDWDEIFAIVEEYGISRLEAGGITDDAMKGLAELECVTHLNVGGSQGLT DEGAQELRRMPQLLDLEIGGWHTKLTDRAFEPLRQLTRLRQFKSCWTQGFNDAAAAHLTPCECLETVNVIGSTAGDGLIR ALDGKAALRFLDTGRGVTDAGIPDLHRIPAFAKWLGGEIEVGLMGAAKLPNRLMIDGEFTDTGLAALEGLEGVAALSFFG HSNAFTAAGLEPLRRLPRLEVFGIDGDQCGDEAMRQIAAIPRLRQLQAQGAIAGDSGWEALSRSQTLEYIWGRECPNFAS RGFIALARLPSLRGMGISCKLVDDGALAALPGFPRLRQFVSIDVSDHGFRHVGRCENLEVLYCMYCRDTGDAATEDIGGL RKLRTYYAGMTQITDRSLEILGGMKACEKLEFWQCMAITDAGVARLASLPRLREIGIHQSPKVSRKITQLFREGVRVDYS G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70399; Mature: 70268
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPTPLPANASLEQLQKQAKERVRALRAAGDSGAMLADAQFAIAREHGFATWAKLKQH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCHHHHHHHHHH IQSLRPPGIEPFERLATDLAAAYTSGDERIVRAINAASGTSFPTDFHDPEKVRQRMPAWY HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHH ASETRSPELAILDARQMVAHAYGFENWTAFAASLTQPAADPRSAPVFLHTRPPFYSIDWR HCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCC ENRLTARGPQTRKDWDEIFAIVEEYGISRLEAGGITDDAMKGLAELECVTHLNVGGSQGL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCC TDEGAQELRRMPQLLDLEIGGWHTKLTDRAFEPLRQLTRLRQFKSCWTQGFNDAAAAHLT CHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC PCECLETVNVIGSTAGDGLIRALDGKAALRFLDTGRGVTDAGIPDLHRIPAFAKWLGGEI HHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE EVGLMGAAKLPNRLMIDGEFTDTGLAALEGLEGVAALSFFGHSNAFTAAGLEPLRRLPRL EEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHCCCE EVFGIDGDQCGDEAMRQIAAIPRLRQLQAQGAIAGDSGWEALSRSQTLEYIWGRECPNFA EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH SRGFIALARLPSLRGMGISCKLVDDGALAALPGFPRLRQFVSIDVSDHGFRHVGRCENLE HCCCEEEHHCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHEECCCCCCCHHCCCCCCCE VLYCMYCRDTGDAATEDIGGLRKLRTYYAGMTQITDRSLEILGGMKACEKLEFWQCMAIT EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHH DAGVARLASLPRLREIGIHQSPKVSRKITQLFREGVRVDYSG HHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SETPTPLPANASLEQLQKQAKERVRALRAAGDSGAMLADAQFAIAREHGFATWAKLKQH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCHHHHHHHHHH IQSLRPPGIEPFERLATDLAAAYTSGDERIVRAINAASGTSFPTDFHDPEKVRQRMPAWY HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHH ASETRSPELAILDARQMVAHAYGFENWTAFAASLTQPAADPRSAPVFLHTRPPFYSIDWR HCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCC ENRLTARGPQTRKDWDEIFAIVEEYGISRLEAGGITDDAMKGLAELECVTHLNVGGSQGL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCC TDEGAQELRRMPQLLDLEIGGWHTKLTDRAFEPLRQLTRLRQFKSCWTQGFNDAAAAHLT CHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC PCECLETVNVIGSTAGDGLIRALDGKAALRFLDTGRGVTDAGIPDLHRIPAFAKWLGGEI HHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE EVGLMGAAKLPNRLMIDGEFTDTGLAALEGLEGVAALSFFGHSNAFTAAGLEPLRRLPRL EEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHCCCE EVFGIDGDQCGDEAMRQIAAIPRLRQLQAQGAIAGDSGWEALSRSQTLEYIWGRECPNFA EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH SRGFIALARLPSLRGMGISCKLVDDGALAALPGFPRLRQFVSIDVSDHGFRHVGRCENLE HCCCEEEHHCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHEECCCCCCCHHCCCCCCCE VLYCMYCRDTGDAATEDIGGLRKLRTYYAGMTQITDRSLEILGGMKACEKLEFWQCMAIT EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHH DAGVARLASLPRLREIGIHQSPKVSRKITQLFREGVRVDYSG HHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA