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The map label for this gene is 116623907

Identifier: 116623907

GI number: 116623907

Start: 6090433

End: 6092010

Strand: Reverse

Name: 116623907

Synonym: Acid_4819

Alternate gene names: NA

Gene position: 6092010-6090433 (Counterclockwise)

Preceding gene: 116623908

Following gene: 116623905

Centisome position: 61.13

GC content: 67.36

Gene sequence:

>1578_bases
ATGATTTGGATGGACTTAGCGGTACGCGGAACGGTCGTTCTGGCAATGGCGTTCGTCGCGTCCTGGATGCTGCGAAACGC
CTCGGCGGCGATCCGCCACTTCGTGTGGACAGCGGCATTCGCGGCGGTCCTGCTGCTGCCCGCGGCGATGCGCGTAGGGC
CGCGCCTGGCGGTGGCGTCAACTCCCGCGGCAGCTACGCCGTCCGTGGCGCGAGCCACTCCGGCCAGAGTGCAGCTGCCC
GCCAATCCCGCCCGAAACAACCAGCCGGTCCGAATCCCGTGGGCGGGGTTCTACGCCGCCGGCGTGCTGCTCGTGATGGT
GCGATTCCTGGCCGGGGCGTGGCGCATGCGCACCCTCGTGCAAGGCGCGCTGCCGGCGAGCTATGCCGCGAGTGCCGCCG
CGGGGGTCCGCGAGGAACTGGAAATCGCGCGTGCCGTCCGTGTGCTCGAGAGCGATGAAGCACACGTGCCGATGGCGTGG
GGCGTCAGGCGATCCGTCGTCCTGCTGCCGGCGGCGGCGCGCCAGTGGCCCGCGGCGCGGCTGCACGCCGTGCTGCTGCA
TGAGATGGTGCACGTCGTGCGGCATGACCTCCTGGCGCAGATGGTGGCGCAGGCGGCATGCTGCCTCTATTGGTTCCATC
CCCTGGCCTGGATTGGGGCGCGGCAGCTACGCAAAGAGCGCGAGCGCGCGTGCGACGACGCGGTACTCAATCGCGGAATT
ACCGCGCCGGATTACGCCGGACACCTGATGGAGTTGGCGCGCGTCCTGGTGGAACGGCAGGCAAGCTTGGCCGATGCCCC
GGCGATGGCGGAGGCAGGCGACCTGGAGGACCGTGTGCGCGCGCTGCTCGATCGCGGCCGGAACCGTAAGCCGCTCACCC
GCGGCGCGGCGTCAGCCGTCGCGGCGATGGCATGCGTGCTGGTGCTCTCCGTGACGTCGCTGGCCCAACCGGGCCGTGGA
GCACTCGCGGGCATCGTGCAGGATCCCAGCGGATCACGCGTGCCTCGCTCGGAAGTCACGATCAAAAACCTGGACGGGAG
CAATGAAGAGGTGACCGTGGTCAACGCCGCGGGCGAATATGCCTTCGCCTCGATTCCCGCGGGCCGCTACGCGATCGAAG
TGAAAGCAGGCGGGTTTAAGATCGGAAAACAAGAGGTGGTGGTAACGGCCGGCGCGGCGTCGCGTGCCGACGTGAGCCTG
CAGATCGGAAATATATCGGAGTCGCTCAAAGTCCGCGCCGCGCGAACCTCACCGGCTCCACCTCCCGCAAGAGCGCTGGG
AACGCCGCAACGGATTCCGATCGGCGGCAACGTGCAGCCGTCGAAACTCATCACCAAAGTGAATCCGGAGTATCCGGCGG
ACCTCAAACAGCAGGGCGTGACCGGGTCGGTGGTCATCCGCGCCATCATCTCGAAGACCGGGGACATACTGAACGCTCAG
GTGATCAACACCGTGCATCCCGGACTGGCGCAGGCCGCTCTGGATGCAGTGAAACAGTGGCGCTACCAACCCACGCTCCT
CAACGGACAGCCGGTGGAGGTGATCACGACGGTCACAATCGCGTTCGAGCTGGAGTAG

Upstream 100 bases:

>100_bases
TAGCGGCGCTGCTCGACCTCTCCTCGGCGAACCTGGCGGGCAGTGATCTGGAACGTATTTCAAAGATGATCGAACAGGCG
AGGAAAGAAGGAGAAAACTT

Downstream 100 bases:

>100_bases
TGATTCTAGACCAGGCCCTTCACCTTCCAACCGTCGCGATATGAGGTCCGAACGTACTGGTTGGCTTCGGGCGAGTTGGT
GAACTGCAACTTCGCGGAGT

Product: TonB family protein

Products: NA

Alternate protein names: NB Family Protein; Regulatory; NB-Like Protein; Penicillinase Antirepressor PenJ; Peptidase M; Penicillin Resistance Regulatory Protein; S41 Family Peptidase; Beta-Lactamase; GAF Sensor Protein; NB Domain/Peptidase; Nb Domain/Peptidase; Protein nB

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MIWMDLAVRGTVVLAMAFVASWMLRNASAAIRHFVWTAAFAAVLLLPAAMRVGPRLAVASTPAAATPSVARATPARVQLP
ANPARNNQPVRIPWAGFYAAGVLLVMVRFLAGAWRMRTLVQGALPASYAASAAAGVREELEIARAVRVLESDEAHVPMAW
GVRRSVVLLPAAARQWPAARLHAVLLHEMVHVVRHDLLAQMVAQAACCLYWFHPLAWIGARQLRKERERACDDAVLNRGI
TAPDYAGHLMELARVLVERQASLADAPAMAEAGDLEDRVRALLDRGRNRKPLTRGAASAVAAMACVLVLSVTSLAQPGRG
ALAGIVQDPSGSRVPRSEVTIKNLDGSNEEVTVVNAAGEYAFASIPAGRYAIEVKAGGFKIGKQEVVVTAGAASRADVSL
QIGNISESLKVRAARTSPAPPPARALGTPQRIPIGGNVQPSKLITKVNPEYPADLKQQGVTGSVVIRAIISKTGDILNAQ
VINTVHPGLAQAALDAVKQWRYQPTLLNGQPVEVITTVTIAFELE

Sequences:

>Translated_525_residues
MIWMDLAVRGTVVLAMAFVASWMLRNASAAIRHFVWTAAFAAVLLLPAAMRVGPRLAVASTPAAATPSVARATPARVQLP
ANPARNNQPVRIPWAGFYAAGVLLVMVRFLAGAWRMRTLVQGALPASYAASAAAGVREELEIARAVRVLESDEAHVPMAW
GVRRSVVLLPAAARQWPAARLHAVLLHEMVHVVRHDLLAQMVAQAACCLYWFHPLAWIGARQLRKERERACDDAVLNRGI
TAPDYAGHLMELARVLVERQASLADAPAMAEAGDLEDRVRALLDRGRNRKPLTRGAASAVAAMACVLVLSVTSLAQPGRG
ALAGIVQDPSGSRVPRSEVTIKNLDGSNEEVTVVNAAGEYAFASIPAGRYAIEVKAGGFKIGKQEVVVTAGAASRADVSL
QIGNISESLKVRAARTSPAPPPARALGTPQRIPIGGNVQPSKLITKVNPEYPADLKQQGVTGSVVIRAIISKTGDILNAQ
VINTVHPGLAQAALDAVKQWRYQPTLLNGQPVEVITTVTIAFELE
>Mature_525_residues
MIWMDLAVRGTVVLAMAFVASWMLRNASAAIRHFVWTAAFAAVLLLPAAMRVGPRLAVASTPAAATPSVARATPARVQLP
ANPARNNQPVRIPWAGFYAAGVLLVMVRFLAGAWRMRTLVQGALPASYAASAAAGVREELEIARAVRVLESDEAHVPMAW
GVRRSVVLLPAAARQWPAARLHAVLLHEMVHVVRHDLLAQMVAQAACCLYWFHPLAWIGARQLRKERERACDDAVLNRGI
TAPDYAGHLMELARVLVERQASLADAPAMAEAGDLEDRVRALLDRGRNRKPLTRGAASAVAAMACVLVLSVTSLAQPGRG
ALAGIVQDPSGSRVPRSEVTIKNLDGSNEEVTVVNAAGEYAFASIPAGRYAIEVKAGGFKIGKQEVVVTAGAASRADVSL
QIGNISESLKVRAARTSPAPPPARALGTPQRIPIGGNVQPSKLITKVNPEYPADLKQQGVTGSVVIRAIISKTGDILNAQ
VINTVHPGLAQAALDAVKQWRYQPTLLNGQPVEVITTVTIAFELE

Specific function: Unknown

COG id: COG4219

COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55867; Mature: 55867

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWMDLAVRGTVVLAMAFVASWMLRNASAAIRHFVWTAAFAAVLLLPAAMRVGPRLAVAS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
TPAAATPSVARATPARVQLPANPARNNQPVRIPWAGFYAAGVLLVMVRFLAGAWRMRTLV
CCCCCCCCHHCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
QGALPASYAASAAAGVREELEIARAVRVLESDEAHVPMAWGVRRSVVLLPAAARQWPAAR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECHHHHCHHHH
LHAVLLHEMVHVVRHDLLAQMVAQAACCLYWFHPLAWIGARQLRKERERACDDAVLNRGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TAPDYAGHLMELARVLVERQASLADAPAMAEAGDLEDRVRALLDRGRNRKPLTRGAASAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
AAMACVLVLSVTSLAQPGRGALAGIVQDPSGSRVPRSEVTIKNLDGSNEEVTVVNAAGEY
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCCE
AFASIPAGRYAIEVKAGGFKIGKQEVVVTAGAASRADVSLQIGNISESLKVRAARTSPAP
EEEECCCCCEEEEEECCCEEECCEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCC
PPARALGTPQRIPIGGNVQPSKLITKVNPEYPADLKQQGVTGSVVIRAIISKTGDILNAQ
CCHHHCCCCCCCCCCCCCCHHHHHEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHH
VINTVHPGLAQAALDAVKQWRYQPTLLNGQPVEVITTVTIAFELE
HHHHCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEEEEC
>Mature Secondary Structure
MIWMDLAVRGTVVLAMAFVASWMLRNASAAIRHFVWTAAFAAVLLLPAAMRVGPRLAVAS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
TPAAATPSVARATPARVQLPANPARNNQPVRIPWAGFYAAGVLLVMVRFLAGAWRMRTLV
CCCCCCCCHHCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
QGALPASYAASAAAGVREELEIARAVRVLESDEAHVPMAWGVRRSVVLLPAAARQWPAAR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECHHHHCHHHH
LHAVLLHEMVHVVRHDLLAQMVAQAACCLYWFHPLAWIGARQLRKERERACDDAVLNRGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TAPDYAGHLMELARVLVERQASLADAPAMAEAGDLEDRVRALLDRGRNRKPLTRGAASAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
AAMACVLVLSVTSLAQPGRGALAGIVQDPSGSRVPRSEVTIKNLDGSNEEVTVVNAAGEY
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCCE
AFASIPAGRYAIEVKAGGFKIGKQEVVVTAGAASRADVSLQIGNISESLKVRAARTSPAP
EEEECCCCCEEEEEECCCEEECCEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCC
PPARALGTPQRIPIGGNVQPSKLITKVNPEYPADLKQQGVTGSVVIRAIISKTGDILNAQ
CCHHHCCCCCCCCCCCCCCHHHHHEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHH
VINTVHPGLAQAALDAVKQWRYQPTLLNGQPVEVITTVTIAFELE
HHHHCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA