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The map label for this gene is yihV [H]

Identifier: 116623896

GI number: 116623896

Start: 6078850

End: 6079803

Strand: Reverse

Name: yihV [H]

Synonym: Acid_4808

Alternate gene names: 116623896

Gene position: 6079803-6078850 (Counterclockwise)

Preceding gene: 116623897

Following gene: 116623895

Centisome position: 61.01

GC content: 64.68

Gene sequence:

>954_bases
ATGCCTGATTACGACGTAGTGGGGGTTGGCCTCAACGCCACCGATACCGTGCTCATTGTGCCGCACTTCCCGGCCTATGC
GGGCAAGGTGCCTTTCGAAGATGAACACATGAGCCCCGGCGGCCAGGTGGCCAGCGCGCTGGTGGCCTGTTCGCGCCTGG
GCCTGCGCGCCAAATATATCGGTTCCGTGGGCGACGACCTGCGCGGCCGAATCCAGCTCGAAAGCCTTCAAGGCACCGGG
ATCAATCTGGATCACGTGCTGCTGCGCCCCGGCTGCGCGAACCAGTCGGCGTACATCATCATCGATCGCTCAACCGGGGA
GCGCACGGTGCTCTGGCAGCGCGACGATTGCCTCAAGATTCTGCCCGAGGAGATCACAGACGAGATGATCTCCTGCGCGC
GGCTGCTGCACATCGACGGGCACGATACGCCGGCGGTGGCGCGCGCCGCCGAGATCGCGCGGCGCCACGGCATCCCGGTC
ACGGTGGACGTGGATACCATTTATCACGGCTTCGACCGGGTTCTCCCGAATGTGGATTACCTGGTGGCGTCCAGCGAATT
TCCGACGGCGTGGACGGGTGAGACCGACCCGTTCAAGGCGCTGGCCACCATTCAGGACGAGTACGGCATGAAGGTCGCGG
CCATGACGCTGGGCGCTCATGGAGCGCTAGCGCGCGAGAATGGACGTTTCCATTACGCACCGGCATTCGTAGTGAATTGT
GTGGATACCACCGGCGCGGGCGACGTGTTTCACGGGGCCTTCTGTTATGCTGTCCTCCAAGGAATGCCGATGAGCCAGGC
ACTCGAATTTTCCAACGCCATGGCGGCCTTGAATTGCACGGCGCTGGGCGCGCGCGGCGGCATCCGCGGCCTGGACGAAG
TGCATGCCCTGATGGCTCGCGCCGAGCGCCGGTCCCACTCCGATTTCGCGGCCCGGGCGGCCCGCCCCTCTTAA

Upstream 100 bases:

>100_bases
CGCCGCGTCGCCGGCCTCAATCGCCGCATCGAGGCCTATAATCTGAAGGCGCCCTTCGCCGGCGCACAGAAAGTACCCAT
TTCCATCCAGAGCCTGATGA

Downstream 100 bases:

>100_bases
AACGCTATGTTCCCGTTACGCGATACACAGCCGAGCTACTCCAGGCCGGTCGTCACGGTCCTGCTGATCGTGGTCAATCT
GCTGGTCTTTCTCTTTGAGA

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MPDYDVVGVGLNATDTVLIVPHFPAYAGKVPFEDEHMSPGGQVASALVACSRLGLRAKYIGSVGDDLRGRIQLESLQGTG
INLDHVLLRPGCANQSAYIIIDRSTGERTVLWQRDDCLKILPEEITDEMISCARLLHIDGHDTPAVARAAEIARRHGIPV
TVDVDTIYHGFDRVLPNVDYLVASSEFPTAWTGETDPFKALATIQDEYGMKVAAMTLGAHGALARENGRFHYAPAFVVNC
VDTTGAGDVFHGAFCYAVLQGMPMSQALEFSNAMAALNCTALGARGGIRGLDEVHALMARAERRSHSDFAARAARPS

Sequences:

>Translated_317_residues
MPDYDVVGVGLNATDTVLIVPHFPAYAGKVPFEDEHMSPGGQVASALVACSRLGLRAKYIGSVGDDLRGRIQLESLQGTG
INLDHVLLRPGCANQSAYIIIDRSTGERTVLWQRDDCLKILPEEITDEMISCARLLHIDGHDTPAVARAAEIARRHGIPV
TVDVDTIYHGFDRVLPNVDYLVASSEFPTAWTGETDPFKALATIQDEYGMKVAAMTLGAHGALARENGRFHYAPAFVVNC
VDTTGAGDVFHGAFCYAVLQGMPMSQALEFSNAMAALNCTALGARGGIRGLDEVHALMARAERRSHSDFAARAARPS
>Mature_316_residues
PDYDVVGVGLNATDTVLIVPHFPAYAGKVPFEDEHMSPGGQVASALVACSRLGLRAKYIGSVGDDLRGRIQLESLQGTGI
NLDHVLLRPGCANQSAYIIIDRSTGERTVLWQRDDCLKILPEEITDEMISCARLLHIDGHDTPAVARAAEIARRHGIPVT
VDVDTIYHGFDRVLPNVDYLVASSEFPTAWTGETDPFKALATIQDEYGMKVAAMTLGAHGALARENGRFHYAPAFVVNCV
DTTGAGDVFHGAFCYAVLQGMPMSQALEFSNAMAALNCTALGARGGIRGLDEVHALMARAERRSHSDFAARAARPS

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082343, Length=298, Percent_Identity=29.8657718120805, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1790193, Length=295, Percent_Identity=28.135593220339, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87081971, Length=324, Percent_Identity=24.6913580246914, Blast_Score=71, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17532905, Length=303, Percent_Identity=27.7227722772277, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34091; Mature: 33960

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDYDVVGVGLNATDTVLIVPHFPAYAGKVPFEDEHMSPGGQVASALVACSRLGLRAKYI
CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
GSVGDDLRGRIQLESLQGTGINLDHVLLRPGCANQSAYIIIDRSTGERTVLWQRDDCLKI
CCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCHHHH
LPEEITDEMISCARLLHIDGHDTPAVARAAEIARRHGIPVTVDVDTIYHGFDRVLPNVDY
CCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEE
LVASSEFPTAWTGETDPFKALATIQDEYGMKVAAMTLGAHGALARENGRFHYAPAFVVNC
EEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCEEECCEEEEEE
VDTTGAGDVFHGAFCYAVLQGMPMSQALEFSNAMAALNCTALGARGGIRGLDEVHALMAR
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
AERRSHSDFAARAARPS
HHHHCCCHHHHHCCCCC
>Mature Secondary Structure 
PDYDVVGVGLNATDTVLIVPHFPAYAGKVPFEDEHMSPGGQVASALVACSRLGLRAKYI
CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
GSVGDDLRGRIQLESLQGTGINLDHVLLRPGCANQSAYIIIDRSTGERTVLWQRDDCLKI
CCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCHHHH
LPEEITDEMISCARLLHIDGHDTPAVARAAEIARRHGIPVTVDVDTIYHGFDRVLPNVDY
CCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEE
LVASSEFPTAWTGETDPFKALATIQDEYGMKVAAMTLGAHGALARENGRFHYAPAFVVNC
EEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCEEECCEEEEEE
VDTTGAGDVFHGAFCYAVLQGMPMSQALEFSNAMAALNCTALGARGGIRGLDEVHALMAR
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
AERRSHSDFAARAARPS
HHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]