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The map label for this gene is ypjG [H]

Identifier: 116623893

GI number: 116623893

Start: 6077219

End: 6077929

Strand: Reverse

Name: ypjG [H]

Synonym: Acid_4805

Alternate gene names: 116623893

Gene position: 6077929-6077219 (Counterclockwise)

Preceding gene: 116623894

Following gene: 116623890

Centisome position: 60.99

GC content: 61.46

Gene sequence:

>711_bases
ATGAGTCTCGACGTACTGGCGATCGCCGCGCATCCCGACGACGTGGAACAGACCTGCGGCGGGACCATGATCAAAATGGC
CGAGGCCGGCTATCGCACCGGAGTGCTCGATTTGACCGCCGGCGATATGGGCACGCGCGGCAGTCCGGAGACGCGCGTAG
CCGAATCCGAAATCGCCGGAAAGCACATGCTGCTCAAGTGGCGCGGCAATCTGCATTTCCCCGATGCGCGCCTGGAGAAC
ACGATCACGGCTCGCATGACGCTGGCCGTCAAAATCCGCGAACTCAAGCCGCGCGTCGTGATTCTGCCTTATTGGGAAGC
GCGGCATCCCGACCACTATCGCGCCAGCGAGATCGGCTTCGAAGCCTGCTTCCTGGCCGGCCTGCGGAAGCTCGACGAAT
ACTCGGAGCCGCACCGTCCATTTAAGATTCTCTACTCCAGCATCTATGCCGAAGTGAAGCCCTCGTTCATCGTGGACATC
AGCGCCCAGTTCGAGCGCCGCATGACCTCGCTGTTGAGCTACACCTCGCAATATGGAGAGACCGGCGAGGGGGGCACGCT
CTTCCCCAACGAGCAGGAAATCCGCGAGCGGCTCGGCGCGGTCGCGCGCTTCTATGGGAATCAGATCGGCGTCAAATACG
GCGAACCGTTCGTGGTGAAGGAAGCGATGCAGGTGGAAGATATCGTGACCATGGGCTCGCGTTCCATCTAG

Upstream 100 bases:

>100_bases
TGTACAATGACGAAGTGCCTGTGATCGCGATCAATCGCGTGAAGGCCTTCAAATACCGGGTGAACATGAACGATTTTCTG
AAGAAACTGGCGGCGCGCGC

Downstream 100 bases:

>100_bases
CTGGTTCAGCCGAGCGCCTGCCGGAAGCGGGAGTAAATTTCCGTTGGCGGCAGGCGATTCCAGGTTTCGTTGACCTGCAT
CGCGAACCAGTCTCCCACGG

Product: LmbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSLDVLAIAAHPDDVEQTCGGTMIKMAEAGYRTGVLDLTAGDMGTRGSPETRVAESEIAGKHMLLKWRGNLHFPDARLEN
TITARMTLAVKIRELKPRVVILPYWEARHPDHYRASEIGFEACFLAGLRKLDEYSEPHRPFKILYSSIYAEVKPSFIVDI
SAQFERRMTSLLSYTSQYGETGEGGTLFPNEQEIRERLGAVARFYGNQIGVKYGEPFVVKEAMQVEDIVTMGSRSI

Sequences:

>Translated_236_residues
MSLDVLAIAAHPDDVEQTCGGTMIKMAEAGYRTGVLDLTAGDMGTRGSPETRVAESEIAGKHMLLKWRGNLHFPDARLEN
TITARMTLAVKIRELKPRVVILPYWEARHPDHYRASEIGFEACFLAGLRKLDEYSEPHRPFKILYSSIYAEVKPSFIVDI
SAQFERRMTSLLSYTSQYGETGEGGTLFPNEQEIRERLGAVARFYGNQIGVKYGEPFVVKEAMQVEDIVTMGSRSI
>Mature_235_residues
SLDVLAIAAHPDDVEQTCGGTMIKMAEAGYRTGVLDLTAGDMGTRGSPETRVAESEIAGKHMLLKWRGNLHFPDARLENT
ITARMTLAVKIRELKPRVVILPYWEARHPDHYRASEIGFEACFLAGLRKLDEYSEPHRPFKILYSSIYAEVKPSFIVDIS
AQFERRMTSLLSYTSQYGETGEGGTLFPNEQEIRERLGAVARFYGNQIGVKYGEPFVVKEAMQVEDIVTMGSRSI

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 26467; Mature: 26335

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDVLAIAAHPDDVEQTCGGTMIKMAEAGYRTGVLDLTAGDMGTRGSPETRVAESEIAG
CCCEEEEEECCCCCHHHHCCCCEEEHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCC
KHMLLKWRGNLHFPDARLENTITARMTLAVKIRELKPRVVILPYWEARHPDHYRASEIGF
CEEEEEECCCCCCCCHHHHHHEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHH
EACFLAGLRKLDEYSEPHRPFKILYSSIYAEVKPSFIVDISAQFERRMTSLLSYTSQYGE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
TGEGGTLFPNEQEIRERLGAVARFYGNQIGVKYGEPFVVKEAMQVEDIVTMGSRSI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLDVLAIAAHPDDVEQTCGGTMIKMAEAGYRTGVLDLTAGDMGTRGSPETRVAESEIAG
CCEEEEEECCCCCHHHHCCCCEEEHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCC
KHMLLKWRGNLHFPDARLENTITARMTLAVKIRELKPRVVILPYWEARHPDHYRASEIGF
CEEEEEECCCCCCCCHHHHHHEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHH
EACFLAGLRKLDEYSEPHRPFKILYSSIYAEVKPSFIVDISAQFERRMTSLLSYTSQYGE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
TGEGGTLFPNEQEIRERLGAVARFYGNQIGVKYGEPFVVKEAMQVEDIVTMGSRSI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]