| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116623883
GI number: 116623883
Start: 6061409
End: 6064048
Strand: Reverse
Name: macB [H]
Synonym: Acid_4795
Alternate gene names: 116623883
Gene position: 6064048-6061409 (Counterclockwise)
Preceding gene: 116623884
Following gene: 116623876
Centisome position: 60.85
GC content: 65.83
Gene sequence:
>2640_bases ATGTTGGACGATTTGTTGATTCGTCTGCGTTCCCTCTTGCGGCGGGAAGCCGTGGAATCCGAAATGGACGAGGAACTGCG TTTTCACTCCGAACACCAACTCGAGAAGTACATGAAGACGGGCATGCCGCGCGAACAGGCTCTACGGCGCGTGCGAATGG AGTTCGGCGGCATGGAACAGGTGAAGGAAGATTGCCGCGATGCGCGCGGCGTCTCCCTGGTGGAAACCGTGATGCAGGAT CTTCGCTACGGCTGGCGGACGCTGGTCAAATCGCCCGGTTTCGCGGCCACGGCGCTGTTCACCCTGGCATTGGGTATTGG AGCCAACACCGCGATTTTTTCGGTGGTGTACGGCGTTCTGCTGCGGCCGCTGCCCTTCCGCGATGCGTCGCGGCTGATGC TGTTGAATGAGACTACGCCGCGGGTCGGCAAGGTGAGCGTTTCTTATCCGAATTACCTGGACTGGCGATCAGAGAGCCGC ACGTTTTCGGAAATGGCGTCGGTAAGCGGGATCCATTTCAACATGACGGGCGGCAGCCAGCCGGAGAACATCGGCGGCCT GGCGGTGTCGCCGAACTTCCTCTCCATGGCCGGCGTGCAGCCGGTGCTCGGGCGGGGTTTCACCGCCGCTGAAGAACGGC CCGGCACAGCGCCGGTCGTGCTGCTCAGTTACGCGCTGTGGCAATCGCATTTCGGCGCGGATCGCGGGGTGGCGGGCCGG ACGATCCGGCTGGATGGCCGGTCCGTTACTGTCATCGGCGTGCTGCCGCCGGAATTTCGTTGGATGGAGCGGTGCGACGT AATGGAACCGATGGGTGTGTGGGCGACGGGCAACAGCGGCGCTGCCGAGAGGGAAAGCCGCGGCGATCTTCTGGTGGTGG GGCGGCTGGCGGCGGGGGTGCCGCCGGAACAGGCGCGCGCGGAGATGGAGGCGATTGCGTCGCGGCTGGAGCGCGCCTTT CCCCAGGCCAATGACCAGTTCGGGGTAAGCATGCAGCCGCTGCGCGAAGCGTTCTCGGGGGATGTGCGTCCGGCGATGCT GGTGCTGCTGGGGGCCGCGATTTTCGTGCTCCTGGTGGCCTGCGCGAATGTGGCGAATCTCTTCCTGATGCGCGGCGCCG TGCGAGCCCGGGAGATCGCGCTGCGCATCGCGATCGGCGCCAGCAGCGGCCGGATCATCCGGCAGATTCTGACGGAGAGC TTTTTGGTGGCGGCGTTGGGGGGCGCGGCCGGCGTGGGGCTGGCGGTGGCAGGAATTCCGGCGATCGCGGGCTTAATTCC GGCGGATACGCTGGCCGGCGCCGTCATCGGCATCAATGGGCCGGTGCTGCTTTTTTCCGGCGGACTCGTGCTGCTCTCGA TGGTTGTCTTCGGTCTGGCGCCGGCAGTGCACTCCGCGGGCGGCAGTATTCAAACGGAGTTGAAGGAGGGTGGCAAGGCG ACCAGCCCGGGCGGCCGGAATCGCTGGCGCGGTTTGCTGGCCACCAGTGAAGTCGCCCTGGCGCTGATTCTCCTGGTAGG CGCGGGGCTGATGATGAAGAGCCTGTATCGCCTGCTGTCGGTGGATTCCGGTTTCCGCGCCGAGCACGTGCTTAAGTTGG ATATGAGCCTGCGCACGGAGCAATACGACAAAGATCCGGCGGTGGTGGGCTTCTGGCAGCAGATGCTGGACCGGGTTCGC GCGCTGCCGGGGGTGGAATCAGCGGCGGTCGGCACGGCGGTTCCGCTCACCGACGACCATTGGCGCAGCGATATTACGGT GGAAGGGATGGCGCTGCCGAAGCCGGGCAGTTTTCCGCATCCGGACGTTCATGTGGTCAGCACGGATTACGAAAAGACGC TGGGGATTCGCACGCTGCGCGGACGGGGTTTCACGGATGCGGACCGGGAGGGTGCTCCGCGGGTGGCGGTGGTCAATGCC ACGGTGGCGCAGCATCTGTTTCCGGGCGCGGACCCGATCGGCAAGCGGTTCACGTTCGGCCGCTCGGGGACGGCGCCGAA GTGGATCACGATTGTGGGCGTGGTGGCCGATACCAAGTTGTACGGGCTGGCCAATCCGGCGCGGCTCGAGGTCTACCTGC CGTTCCGTCAGCGACCGTCGGATGGGATGGTGCTGCTGGTGAAGTCCGTTCAGGAGCCGGCAACGCTGGTCTCCGCGATT CGCGGCGTGGTGGCTTCGATCGACAAGGAGCAGCCCGTCTTTGGCATCGCGACGATGGAGGAGGTGGTGAACGCTTCGGT GGCCACGCGGCGTGTCACGCTGATCCTGCTCGGGCTGTTCAGCGGGCTGGCGCTGGCGCTGGCGGCTGTCGGAATTTACG GAGTGCTTTCCTATTCGGTGGCGCAGCGTTCGCGAGAGATCGGCATCCGGGTGGCGATGGGAGCGCAGCGCGGCGACGTG CTGCGACTGGTGCTGGCGCAGGGAGGGAAGATCTCGGTCGCGGGGATCGCGGCGGGCACGGGGGTTTCGGTGGGACTCAC GCGGTTGATGGCGAAGCTGCTGTATTCGGTGAGCGCCGTGGATCCCTCGATCTTCGCGGGGGTGGCGTTGCTGCTGCTGC TGGTGGCGCTGGCGGCGTCCTATATTCCGGCGCGGCGGACGCTGCGGGTGGATCCGCTGATTGCGCTGCGGCACGAGTGA
Upstream 100 bases:
>100_bases ACCAAGAGCGGGCGGCGGCAGCTGGCCACGGAAAAAGAGTCGTGGCAAAAGCTGACGGCCGCGGTGGCACAGGTGCTCGG CCCAGCTTAAGGAGTCTGTC
Downstream 100 bases:
>100_bases AGGTGGAAGAGATCGCTCCCTAACGGTCGCGGTTCGCGGACGATTGCTGGTGCGCGAGAAGGGGCTGAGAGTTCCGGGCT AGACGGCGGCGAGGGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MLDDLLIRLRSLLRREAVESEMDEELRFHSEHQLEKYMKTGMPREQALRRVRMEFGGMEQVKEDCRDARGVSLVETVMQD LRYGWRTLVKSPGFAATALFTLALGIGANTAIFSVVYGVLLRPLPFRDASRLMLLNETTPRVGKVSVSYPNYLDWRSESR TFSEMASVSGIHFNMTGGSQPENIGGLAVSPNFLSMAGVQPVLGRGFTAAEERPGTAPVVLLSYALWQSHFGADRGVAGR TIRLDGRSVTVIGVLPPEFRWMERCDVMEPMGVWATGNSGAAERESRGDLLVVGRLAAGVPPEQARAEMEAIASRLERAF PQANDQFGVSMQPLREAFSGDVRPAMLVLLGAAIFVLLVACANVANLFLMRGAVRAREIALRIAIGASSGRIIRQILTES FLVAALGGAAGVGLAVAGIPAIAGLIPADTLAGAVIGINGPVLLFSGGLVLLSMVVFGLAPAVHSAGGSIQTELKEGGKA TSPGGRNRWRGLLATSEVALALILLVGAGLMMKSLYRLLSVDSGFRAEHVLKLDMSLRTEQYDKDPAVVGFWQQMLDRVR ALPGVESAAVGTAVPLTDDHWRSDITVEGMALPKPGSFPHPDVHVVSTDYEKTLGIRTLRGRGFTDADREGAPRVAVVNA TVAQHLFPGADPIGKRFTFGRSGTAPKWITIVGVVADTKLYGLANPARLEVYLPFRQRPSDGMVLLVKSVQEPATLVSAI RGVVASIDKEQPVFGIATMEEVVNASVATRRVTLILLGLFSGLALALAAVGIYGVLSYSVAQRSREIGIRVAMGAQRGDV LRLVLAQGGKISVAGIAAGTGVSVGLTRLMAKLLYSVSAVDPSIFAGVALLLLLVALAASYIPARRTLRVDPLIALRHE
Sequences:
>Translated_879_residues MLDDLLIRLRSLLRREAVESEMDEELRFHSEHQLEKYMKTGMPREQALRRVRMEFGGMEQVKEDCRDARGVSLVETVMQD LRYGWRTLVKSPGFAATALFTLALGIGANTAIFSVVYGVLLRPLPFRDASRLMLLNETTPRVGKVSVSYPNYLDWRSESR TFSEMASVSGIHFNMTGGSQPENIGGLAVSPNFLSMAGVQPVLGRGFTAAEERPGTAPVVLLSYALWQSHFGADRGVAGR TIRLDGRSVTVIGVLPPEFRWMERCDVMEPMGVWATGNSGAAERESRGDLLVVGRLAAGVPPEQARAEMEAIASRLERAF PQANDQFGVSMQPLREAFSGDVRPAMLVLLGAAIFVLLVACANVANLFLMRGAVRAREIALRIAIGASSGRIIRQILTES FLVAALGGAAGVGLAVAGIPAIAGLIPADTLAGAVIGINGPVLLFSGGLVLLSMVVFGLAPAVHSAGGSIQTELKEGGKA TSPGGRNRWRGLLATSEVALALILLVGAGLMMKSLYRLLSVDSGFRAEHVLKLDMSLRTEQYDKDPAVVGFWQQMLDRVR ALPGVESAAVGTAVPLTDDHWRSDITVEGMALPKPGSFPHPDVHVVSTDYEKTLGIRTLRGRGFTDADREGAPRVAVVNA TVAQHLFPGADPIGKRFTFGRSGTAPKWITIVGVVADTKLYGLANPARLEVYLPFRQRPSDGMVLLVKSVQEPATLVSAI RGVVASIDKEQPVFGIATMEEVVNASVATRRVTLILLGLFSGLALALAAVGIYGVLSYSVAQRSREIGIRVAMGAQRGDV LRLVLAQGGKISVAGIAAGTGVSVGLTRLMAKLLYSVSAVDPSIFAGVALLLLLVALAASYIPARRTLRVDPLIALRHE >Mature_879_residues MLDDLLIRLRSLLRREAVESEMDEELRFHSEHQLEKYMKTGMPREQALRRVRMEFGGMEQVKEDCRDARGVSLVETVMQD LRYGWRTLVKSPGFAATALFTLALGIGANTAIFSVVYGVLLRPLPFRDASRLMLLNETTPRVGKVSVSYPNYLDWRSESR TFSEMASVSGIHFNMTGGSQPENIGGLAVSPNFLSMAGVQPVLGRGFTAAEERPGTAPVVLLSYALWQSHFGADRGVAGR TIRLDGRSVTVIGVLPPEFRWMERCDVMEPMGVWATGNSGAAERESRGDLLVVGRLAAGVPPEQARAEMEAIASRLERAF PQANDQFGVSMQPLREAFSGDVRPAMLVLLGAAIFVLLVACANVANLFLMRGAVRAREIALRIAIGASSGRIIRQILTES FLVAALGGAAGVGLAVAGIPAIAGLIPADTLAGAVIGINGPVLLFSGGLVLLSMVVFGLAPAVHSAGGSIQTELKEGGKA TSPGGRNRWRGLLATSEVALALILLVGAGLMMKSLYRLLSVDSGFRAEHVLKLDMSLRTEQYDKDPAVVGFWQQMLDRVR ALPGVESAAVGTAVPLTDDHWRSDITVEGMALPKPGSFPHPDVHVVSTDYEKTLGIRTLRGRGFTDADREGAPRVAVVNA TVAQHLFPGADPIGKRFTFGRSGTAPKWITIVGVVADTKLYGLANPARLEVYLPFRQRPSDGMVLLVKSVQEPATLVSAI RGVVASIDKEQPVFGIATMEEVVNASVATRRVTLILLGLFSGLALALAAVGIYGVLSYSVAQRSREIGIRVAMGAQRGDV LRLVLAQGGKISVAGIAAGTGVSVGLTRLMAKLLYSVSAVDPSIFAGVALLLLLVALAASYIPARRTLRVDPLIALRHE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=291, Percent_Identity=26.8041237113402, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 93885; Mature: 93885
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDLLIRLRSLLRREAVESEMDEELRFHSEHQLEKYMKTGMPREQALRRVRMEFGGMEQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHH VKEDCRDARGVSLVETVMQDLRYGWRTLVKSPGFAATALFTLALGIGANTAIFSVVYGVL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LRPLPFRDASRLMLLNETTPRVGKVSVSYPNYLDWRSESRTFSEMASVSGIHFNMTGGSQ HCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCC PENIGGLAVSPNFLSMAGVQPVLGRGFTAAEERPGTAPVVLLSYALWQSHFGADRGVAGR CCCCCCEEECCCHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TIRLDGRSVTVIGVLPPEFRWMERCDVMEPMGVWATGNSGAAERESRGDLLVVGRLAAGV EEEECCCEEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHCCC PPEQARAEMEAIASRLERAFPQANDQFGVSMQPLREAFSGDVRPAMLVLLGAAIFVLLVA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH CANVANLFLMRGAVRAREIALRIAIGASSGRIIRQILTESFLVAALGGAAGVGLAVAGIP HHHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AIAGLIPADTLAGAVIGINGPVLLFSGGLVLLSMVVFGLAPAVHSAGGSIQTELKEGGKA HHHHHCCHHHHCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC TSPGGRNRWRGLLATSEVALALILLVGAGLMMKSLYRLLSVDSGFRAEHVLKLDMSLRTE CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHH QYDKDPAVVGFWQQMLDRVRALPGVESAAVGTAVPLTDDHWRSDITVEGMALPKPGSFPH HCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC PDVHVVSTDYEKTLGIRTLRGRGFTDADREGAPRVAVVNATVAQHLFPGADPIGKRFTFG CCEEEEECCHHHHHCCEEECCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCEECC RSGTAPKWITIVGVVADTKLYGLANPARLEVYLPFRQRPSDGMVLLVKSVQEPATLVSAI CCCCCCCEEEEEEEEECCEEEECCCCCEEEEEECCCCCCCCCEEEEEHHHCCHHHHHHHH RGVVASIDKEQPVFGIATMEEVVNASVATRRVTLILLGLFSGLALALAAVGIYGVLSYSV HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRSREIGIRVAMGAQRGDVLRLVLAQGGKISVAGIAAGTGVSVGLTRLMAKLLYSVSAV HHHHHHCCEEEEECCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC DPSIFAGVALLLLLVALAASYIPARRTLRVDPLIALRHE CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCC >Mature Secondary Structure MLDDLLIRLRSLLRREAVESEMDEELRFHSEHQLEKYMKTGMPREQALRRVRMEFGGMEQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHH VKEDCRDARGVSLVETVMQDLRYGWRTLVKSPGFAATALFTLALGIGANTAIFSVVYGVL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LRPLPFRDASRLMLLNETTPRVGKVSVSYPNYLDWRSESRTFSEMASVSGIHFNMTGGSQ HCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCC PENIGGLAVSPNFLSMAGVQPVLGRGFTAAEERPGTAPVVLLSYALWQSHFGADRGVAGR CCCCCCEEECCCHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TIRLDGRSVTVIGVLPPEFRWMERCDVMEPMGVWATGNSGAAERESRGDLLVVGRLAAGV EEEECCCEEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHCCC PPEQARAEMEAIASRLERAFPQANDQFGVSMQPLREAFSGDVRPAMLVLLGAAIFVLLVA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH CANVANLFLMRGAVRAREIALRIAIGASSGRIIRQILTESFLVAALGGAAGVGLAVAGIP HHHHHHHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AIAGLIPADTLAGAVIGINGPVLLFSGGLVLLSMVVFGLAPAVHSAGGSIQTELKEGGKA HHHHHCCHHHHCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC TSPGGRNRWRGLLATSEVALALILLVGAGLMMKSLYRLLSVDSGFRAEHVLKLDMSLRTE CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHH QYDKDPAVVGFWQQMLDRVRALPGVESAAVGTAVPLTDDHWRSDITVEGMALPKPGSFPH HCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC PDVHVVSTDYEKTLGIRTLRGRGFTDADREGAPRVAVVNATVAQHLFPGADPIGKRFTFG CCEEEEECCHHHHHCCEEECCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCEECC RSGTAPKWITIVGVVADTKLYGLANPARLEVYLPFRQRPSDGMVLLVKSVQEPATLVSAI CCCCCCCEEEEEEEEECCEEEECCCCCEEEEEECCCCCCCCCEEEEEHHHCCHHHHHHHH RGVVASIDKEQPVFGIATMEEVVNASVATRRVTLILLGLFSGLALALAAVGIYGVLSYSV HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRSREIGIRVAMGAQRGDVLRLVLAQGGKISVAGIAAGTGVSVGLTRLMAKLLYSVSAV HHHHHHCCEEEEECCCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC DPSIFAGVALLLLLVALAASYIPARRTLRVDPLIALRHE CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA