| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623820
Identifier: 116623820
GI number: 116623820
Start: 5988514
End: 5988855
Strand: Reverse
Name: 116623820
Synonym: Acid_4732
Alternate gene names: NA
Gene position: 5988855-5988514 (Counterclockwise)
Preceding gene: 116623821
Following gene: 116623819
Centisome position: 60.1
GC content: 58.19
Gene sequence:
>342_bases ATGACTCAGGCAAAGAAATGGCACGAAAGGCAAAGTTCGCCCGCTACCGGGAACATCTCCGCACGACCGGGCCGGTCAGC CCTGGGGGGTCTTCCATCGTCAAGGAGAATGGCGACGATCCCTTATCTGTGCCACTTCAATGAATCAATACTGGGGCCCC AGTATGCGTTTTCGAGGCATCGCGGAATCTATCGGTCCGATGTGGTCCAAACTACAACCAATCCTGGGACAGGGGCTGAC CTCCTCCCGTCGCTCAGCCCCCGGTCCCAGGCAAAAGAACGCGTCGGGAGGACCACGCTCTTCTCATCGTCCGCGATGAG TTCCGATCCGGCTATTCCTTGA
Upstream 100 bases:
>100_bases TCTCAGCCCCGAATTCCGGCACCCACAATGCGGCGACCATGCTGGTGTTTACTCCGAAGGAAGAAGAGGGTTCCGGCGGG CCAGATTCCATCTCTCCGCG
Downstream 100 bases:
>100_bases TCGGGTTGCTCGCCAGCAGAGCCCGTCTCCGCTTCACCGGACACCAGCGATCATAAAACCTGGACGGAAAAGCGAAAACA GAATATCATCGAACGGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTQAKKWHERQSSPATGNISARPGRSALGGLPSSRRMATIPYLCHFNESILGPQYAFSRHRGIYRSDVVQTTTNPGTGAD LLPSLSPRSQAKERVGRTTLFSSSAMSSDPAIP
Sequences:
>Translated_113_residues MTQAKKWHERQSSPATGNISARPGRSALGGLPSSRRMATIPYLCHFNESILGPQYAFSRHRGIYRSDVVQTTTNPGTGAD LLPSLSPRSQAKERVGRTTLFSSSAMSSDPAIP >Mature_112_residues TQAKKWHERQSSPATGNISARPGRSALGGLPSSRRMATIPYLCHFNESILGPQYAFSRHRGIYRSDVVQTTTNPGTGADL LPSLSPRSQAKERVGRTTLFSSSAMSSDPAIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12216; Mature: 12085
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAKKWHERQSSPATGNISARPGRSALGGLPSSRRMATIPYLCHFNESILGPQYAFSRH CCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCEECCCCCCCCCHHHHHHH RGIYRSDVVQTTTNPGTGADLLPSLSPRSQAKERVGRTTLFSSSAMSSDPAIP CCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCC >Mature Secondary Structure TQAKKWHERQSSPATGNISARPGRSALGGLPSSRRMATIPYLCHFNESILGPQYAFSRH CCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCEECCCCCCCCCHHHHHHH RGIYRSDVVQTTTNPGTGADLLPSLSPRSQAKERVGRTTLFSSSAMSSDPAIP CCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA