| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623807
Identifier: 116623807
GI number: 116623807
Start: 5972507
End: 5973052
Strand: Reverse
Name: 116623807
Synonym: Acid_4719
Alternate gene names: NA
Gene position: 5973052-5972507 (Counterclockwise)
Preceding gene: 116623808
Following gene: 116623806
Centisome position: 59.94
GC content: 63.55
Gene sequence:
>546_bases ATGAAGTGGGTGAAAATCGCAGGGGCGGTGCTTGCCGTATTGATTGTGGTGCCGGTGCTGGCGGTGGCCATCGCGGGGGC GGGAGCGGATTCGAACCGGCTTACCGCGTCGATCGTGATTCATCAGAAGCCGGAAGCGGTGTGGCCGTGGTTGTACAAGC CGGAGAAGGTGAAACAGTGGGTGACGTGGCTGGTGGAGATCCGCGAGAGGGGGGACGGGGAGCCCGCGGTTGGGCAGAGC TCGGTGTGGGTGATGGAAGACCGCAACAACGGCAATGCGCGTATGGAGATCACGGGGACGGTGGAGGCGGTGGAACCGAA CCGGCGGATCGCGGTGAAGCTGAGCGCGACGGAAGGTTTCATGGGAAACACGGTGTACACGCTGACGCCGCTGCCGGATG GCAGCACGCGCCTGGATTCCGACAGCCGCTACCGGTTCGATAATGGATTTGCGCGCTTCATGACTCCGGTGATCTGCTGG CAGGCGAAGAAGAAGATGCTGAGCGACCTGGAGCAGCTGCGGGCGCGCGTGGAGGGGGGCGTTTGA
Upstream 100 bases:
>100_bases CGTGGTTTTGCGGTGCAAGCCTGGCGACGGTGGCGCTCGCACTCGCGGCCGGCGCCTGGGTGCGTCACATTTTCGATAAG CCATCGGGAGGGAGGTTCGC
Downstream 100 bases:
>100_bases AACTTTGCGCGTGGGTATTGCTGATGGCTCTGCCGCTGGTGGCGGCGGATCCGCACATGACGCCGGGGGAACGGGCGAAG GCATTGAAGTACCTGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKWVKIAGAVLAVLIVVPVLAVAIAGAGADSNRLTASIVIHQKPEAVWPWLYKPEKVKQWVTWLVEIRERGDGEPAVGQS SVWVMEDRNNGNARMEITGTVEAVEPNRRIAVKLSATEGFMGNTVYTLTPLPDGSTRLDSDSRYRFDNGFARFMTPVICW QAKKKMLSDLEQLRARVEGGV
Sequences:
>Translated_181_residues MKWVKIAGAVLAVLIVVPVLAVAIAGAGADSNRLTASIVIHQKPEAVWPWLYKPEKVKQWVTWLVEIRERGDGEPAVGQS SVWVMEDRNNGNARMEITGTVEAVEPNRRIAVKLSATEGFMGNTVYTLTPLPDGSTRLDSDSRYRFDNGFARFMTPVICW QAKKKMLSDLEQLRARVEGGV >Mature_181_residues MKWVKIAGAVLAVLIVVPVLAVAIAGAGADSNRLTASIVIHQKPEAVWPWLYKPEKVKQWVTWLVEIRERGDGEPAVGQS SVWVMEDRNNGNARMEITGTVEAVEPNRRIAVKLSATEGFMGNTVYTLTPLPDGSTRLDSDSRYRFDNGFARFMTPVICW QAKKKMLSDLEQLRARVEGGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20066; Mature: 20066
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWVKIAGAVLAVLIVVPVLAVAIAGAGADSNRLTASIVIHQKPEAVWPWLYKPEKVKQW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHH VTWLVEIRERGDGEPAVGQSSVWVMEDRNNGNARMEITGTVEAVEPNRRIAVKLSATEGF HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCC MGNTVYTLTPLPDGSTRLDSDSRYRFDNGFARFMTPVICWQAKKKMLSDLEQLRARVEGG CCCEEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC V C >Mature Secondary Structure MKWVKIAGAVLAVLIVVPVLAVAIAGAGADSNRLTASIVIHQKPEAVWPWLYKPEKVKQW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHH VTWLVEIRERGDGEPAVGQSSVWVMEDRNNGNARMEITGTVEAVEPNRRIAVKLSATEGF HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCCCC MGNTVYTLTPLPDGSTRLDSDSRYRFDNGFARFMTPVICWQAKKKMLSDLEQLRARVEGG CCCEEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA