| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623796
Identifier: 116623796
GI number: 116623796
Start: 5960521
End: 5961150
Strand: Direct
Name: 116623796
Synonym: Acid_4708
Alternate gene names: NA
Gene position: 5960521-5961150 (Clockwise)
Preceding gene: 116623795
Following gene: 116623805
Centisome position: 59.81
GC content: 60.79
Gene sequence:
>630_bases ATGAAAACACTAGGTTGGCTCGTACTGTTCGGGTTTGCTGCGACCACCGGAAGGGTGGTTACCTTCGACACCTCCGCGCT GGGGCAGACTCCGCCCGAATGGACGGTCGCGATGACCAACCGCGGCCGCGCACCGCACTGGGAAGTGGTTCGCGACCAGA CCGCTCCCACTCAGCCCTACGTCTTCGCACAAACCGCCGCGGATCGCGTCGGTGATCGCTTCCCGCTCGCCATTCTCAAT GGCGTGACCATGCGCGATGGCGATGTCAGTGTACGCCTCAAGCCGGTTTCCGGCCACGACGTGCGCGCCGGCGGAGTCGT CTGGCACTACCGCGATCCGAATAACTATTACCTTGCGCGCGCCAATGCCGTTGACAAAAACGTACAGGTTTTCAAGGTGG AGAACGGCCGCCGCATTCCCCTGATCGCCGGTGCCAAGCACGAAATTCCCACCAACGGCTGGAGCATCATCAAGGTATCC GTCAAGGGCAATCGCTACCAGGTTTACATGGACCATCGCCGCATTCTGCAGGGCTGGGATAATACCTTCCCCACCACCGG CGGCGTCGGTCTGTGGACCGTCGGCGACTCCATAACCTACTTCGACGATTTCCGCGTCACCCCCAAATAA
Upstream 100 bases:
>100_bases GCGCCGCCGCCGGAAAGCCCTAGGCGCGCGGGGCGCCTCTGTGCTACAACGGAACTAAGGGTGAGACACGCTCAGCGCCT TCATTCGGGCGTGTCGCGAT
Downstream 100 bases:
>100_bases GAAGGGGCGTAACAGTGGGGCAGCCAATCGTGGCTGCAGCCGCCTTTCAGGCGGCTTCTTGCGGAGACCGCCAGGGCCTC CAAATTGCGCGTCAGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKTLGWLVLFGFAATTGRVVTFDTSALGQTPPEWTVAMTNRGRAPHWEVVRDQTAPTQPYVFAQTAADRVGDRFPLAILN GVTMRDGDVSVRLKPVSGHDVRAGGVVWHYRDPNNYYLARANAVDKNVQVFKVENGRRIPLIAGAKHEIPTNGWSIIKVS VKGNRYQVYMDHRRILQGWDNTFPTTGGVGLWTVGDSITYFDDFRVTPK
Sequences:
>Translated_209_residues MKTLGWLVLFGFAATTGRVVTFDTSALGQTPPEWTVAMTNRGRAPHWEVVRDQTAPTQPYVFAQTAADRVGDRFPLAILN GVTMRDGDVSVRLKPVSGHDVRAGGVVWHYRDPNNYYLARANAVDKNVQVFKVENGRRIPLIAGAKHEIPTNGWSIIKVS VKGNRYQVYMDHRRILQGWDNTFPTTGGVGLWTVGDSITYFDDFRVTPK >Mature_209_residues MKTLGWLVLFGFAATTGRVVTFDTSALGQTPPEWTVAMTNRGRAPHWEVVRDQTAPTQPYVFAQTAADRVGDRFPLAILN GVTMRDGDVSVRLKPVSGHDVRAGGVVWHYRDPNNYYLARANAVDKNVQVFKVENGRRIPLIAGAKHEIPTNGWSIIKVS VKGNRYQVYMDHRRILQGWDNTFPTTGGVGLWTVGDSITYFDDFRVTPK
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23361; Mature: 23361
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLGWLVLFGFAATTGRVVTFDTSALGQTPPEWTVAMTNRGRAPHWEVVRDQTAPTQPY CCHHHEEEEEEHHCCCCEEEEEECHHCCCCCCCEEEEEECCCCCCCHHEEECCCCCCCCE VFAQTAADRVGDRFPLAILNGVTMRDGDVSVRLKPVSGHDVRAGGVVWHYRDPNNYYLAR EEEECHHHHCCCCCCEEECCCCEEECCCEEEEEEECCCCCEEECCEEEEEECCCCEEEEE ANAVDKNVQVFKVENGRRIPLIAGAKHEIPTNGWSIIKVSVKGNRYQVYMDHRRILQGWD CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECHHHHHHCCC NTFPTTGGVGLWTVGDSITYFDDFRVTPK CCCCCCCCEEEEEECCCEEEEEEEEECCC >Mature Secondary Structure MKTLGWLVLFGFAATTGRVVTFDTSALGQTPPEWTVAMTNRGRAPHWEVVRDQTAPTQPY CCHHHEEEEEEHHCCCCEEEEEECHHCCCCCCCEEEEEECCCCCCCHHEEECCCCCCCCE VFAQTAADRVGDRFPLAILNGVTMRDGDVSVRLKPVSGHDVRAGGVVWHYRDPNNYYLAR EEEECHHHHCCCCCCEEECCCCEEECCCEEEEEEECCCCCEEECCEEEEEECCCCEEEEE ANAVDKNVQVFKVENGRRIPLIAGAKHEIPTNGWSIIKVSVKGNRYQVYMDHRRILQGWD CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECHHHHHHCCC NTFPTTGGVGLWTVGDSITYFDDFRVTPK CCCCCCCCEEEEEECCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA