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The map label for this gene is 116623784

Identifier: 116623784

GI number: 116623784

Start: 5945173

End: 5945517

Strand: Reverse

Name: 116623784

Synonym: Acid_4696

Alternate gene names: NA

Gene position: 5945517-5945173 (Counterclockwise)

Preceding gene: 116623785

Following gene: 116623782

Centisome position: 59.66

GC content: 61.74

Gene sequence:

>345_bases
ATGCTGCTGCACATTGTGGAACGAGAGATGGCGCCGGACATCACCGTGGTGGAACTGACCGGCAGGCTGGCATTGGGTCG
CGAGAGCCAGCGGATCGAAGCCCTGGTGGAGGAGCTTTCCAAGAAGCCTTCCCGGAAGGTGATCTTCGATTTGACGGGCG
TCGATTACATCGATAGCGCCGGCATCGGAATGGTCGCCCTGGCGTCCGGAAAACTCAAGGAATCGGGCGGCACCCTAGCC
CTAGTCGCGCCCGAAGGCCGCGTCCTTCAATTGCTGAACCTGACCCAGATGGGCATGATCGTCAAGGTCTGCCCTACGCT
GGCTGCCGCCGCCGCAGCCGTATAG

Upstream 100 bases:

>100_bases
CAGCATCCCCTGTTCCTGTTCGTCAACAATCGCCTGGAGGGTAATGCGCCGATGACCATCCTCTCGCTGGTTGACTGATG
TATGCTAACAACACGCTTCT

Downstream 100 bases:

>100_bases
TCAAATTCACGATTTCGCGTGATATAATCGAGTTTCAGTTTTGCCCTCCCAAGGGCCTGTAGCTCAGTTGGTTAGAGCGC
TACCTTGACACGGTAGAGGT

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MLLHIVEREMAPDITVVELTGRLALGRESQRIEALVEELSKKPSRKVIFDLTGVDYIDSAGIGMVALASGKLKESGGTLA
LVAPEGRVLQLLNLTQMGMIVKVCPTLAAAAAAV

Sequences:

>Translated_114_residues
MLLHIVEREMAPDITVVELTGRLALGRESQRIEALVEELSKKPSRKVIFDLTGVDYIDSAGIGMVALASGKLKESGGTLA
LVAPEGRVLQLLNLTQMGMIVKVCPTLAAAAAAV
>Mature_114_residues
MLLHIVEREMAPDITVVELTGRLALGRESQRIEALVEELSKKPSRKVIFDLTGVDYIDSAGIGMVALASGKLKESGGTLA
LVAPEGRVLQLLNLTQMGMIVKVCPTLAAAAAAV

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12040; Mature: 12040

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHIVEREMAPDITVVELTGRLALGRESQRIEALVEELSKKPSRKVIFDLTGVDYIDSA
CEEEEECHHCCCCEEEEEEECCEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
GIGMVALASGKLKESGGTLALVAPEGRVLQLLNLTQMGMIVKVCPTLAAAAAAV
CCCEEEEECCCEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLHIVEREMAPDITVVELTGRLALGRESQRIEALVEELSKKPSRKVIFDLTGVDYIDSA
CEEEEECHHCCCCEEEEEEECCEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
GIGMVALASGKLKESGGTLALVAPEGRVLQLLNLTQMGMIVKVCPTLAAAAAAV
CCCEEEEECCCEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA