| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623694
Identifier: 116623694
GI number: 116623694
Start: 5824287
End: 5825252
Strand: Reverse
Name: 116623694
Synonym: Acid_4606
Alternate gene names: NA
Gene position: 5825252-5824287 (Counterclockwise)
Preceding gene: 116623697
Following gene: 116623690
Centisome position: 58.45
GC content: 65.01
Gene sequence:
>966_bases GTGAAGCTCTTCTTGATACTGGCTGTTTCGGCGAGCCTGGCCGCGCAGACCTCAGAATTCGTGGCCGACCCCATGCCGAC CCCGTCCTGCCACGCGTCCACTATCGTCGAACTGGCCTCCGGCGACCTGATGACGGCCTGGTTCGGCGGCGCTGGCGAGG GACGCCCCGACGTCGCCATCTGGGGTGCGCGCCGTCATGCCGGAAAGTGGCAGCCGCCCGTGGAACTCGCCCGCGAACCC AACATCGCCACCTGGAACCCGGTACTCTTCCACTCGGGCGATGGCCTGCTCTGGCTGTATTACAAATTCGGCCCCTCGCC CCAGCAGTGGACCGCCGCCAGAATGTGGAGCCGCGACGATGGCGTCACTTGGTCGAAGGCCGAGCACCTGCCCGCTGGGC TCTACGGCGCCATTCGCGCCAAACCGCTGGTGCTGCCCAAGGGACTGATCGTCAGCGGATCGTCAGTCGAGAGCTACAAT TCGTGGGCGGCGTGGGTGGAGCGCAGCACGGATTTCGGCAAAACGTGGACACGCCACGGCCCCATCGTGCCGCCCGAGGG CGGGATTATCCAGCCCTCCGTGGTGCAGGTGGAAGGCGACCATCTGCGCTTCTACGCCCGTTCCGACAAGGCTGCCCGCA TCTGCGTCTCCGATTCCTACGATGCCGGTATCACCTGGACTCCGGCGCGCGTGACGGAGCTGCCCAATCCGAACTCCGGG ATCGACGTGGTGCGCCTCAAGGACGGCCGCTACCTCGCGGTCTACAATCACATCCCGCGCGGCCGCACCCCGCTGAATCT GGCAATTAGCAATGACGGCGACCATTGGACGCCGCTGAAGACTCTGGAATCCGACCCCGGCGAGTACTCCTACCCCGCGA TGATCCAAGCGTCCGACGGCCTGATTCACATCACCTACACCTGGCGCCGCCAGAAGATCAAGCACGTCGAAGTCAGGGTG AAATGA
Upstream 100 bases:
>100_bases GCGGGATTGTCCCATTCCGGGCGGATCTGGGCCGTTGCCGCCGCACAAAGTATCAGGGCAAGAATTGCTATTCGCATACG ATTATCCGCAGAATAGCAGG
Downstream 100 bases:
>100_bases GCGATGGTGACCTAACTTAGGTCACCATGCGTTTGTAAGTCCCGCCGAATCAGTGGACCCTGCTTCCCGGTGACCGAACT TAGGTCACCAAGGGCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MKLFLILAVSASLAAQTSEFVADPMPTPSCHASTIVELASGDLMTAWFGGAGEGRPDVAIWGARRHAGKWQPPVELAREP NIATWNPVLFHSGDGLLWLYYKFGPSPQQWTAARMWSRDDGVTWSKAEHLPAGLYGAIRAKPLVLPKGLIVSGSSVESYN SWAAWVERSTDFGKTWTRHGPIVPPEGGIIQPSVVQVEGDHLRFYARSDKAARICVSDSYDAGITWTPARVTELPNPNSG IDVVRLKDGRYLAVYNHIPRGRTPLNLAISNDGDHWTPLKTLESDPGEYSYPAMIQASDGLIHITYTWRRQKIKHVEVRV K
Sequences:
>Translated_321_residues MKLFLILAVSASLAAQTSEFVADPMPTPSCHASTIVELASGDLMTAWFGGAGEGRPDVAIWGARRHAGKWQPPVELAREP NIATWNPVLFHSGDGLLWLYYKFGPSPQQWTAARMWSRDDGVTWSKAEHLPAGLYGAIRAKPLVLPKGLIVSGSSVESYN SWAAWVERSTDFGKTWTRHGPIVPPEGGIIQPSVVQVEGDHLRFYARSDKAARICVSDSYDAGITWTPARVTELPNPNSG IDVVRLKDGRYLAVYNHIPRGRTPLNLAISNDGDHWTPLKTLESDPGEYSYPAMIQASDGLIHITYTWRRQKIKHVEVRV K >Mature_321_residues MKLFLILAVSASLAAQTSEFVADPMPTPSCHASTIVELASGDLMTAWFGGAGEGRPDVAIWGARRHAGKWQPPVELAREP NIATWNPVLFHSGDGLLWLYYKFGPSPQQWTAARMWSRDDGVTWSKAEHLPAGLYGAIRAKPLVLPKGLIVSGSSVESYN SWAAWVERSTDFGKTWTRHGPIVPPEGGIIQPSVVQVEGDHLRFYARSDKAARICVSDSYDAGITWTPARVTELPNPNSG IDVVRLKDGRYLAVYNHIPRGRTPLNLAISNDGDHWTPLKTLESDPGEYSYPAMIQASDGLIHITYTWRRQKIKHVEVRV K
Specific function: Unknown
COG id: COG4692
COG function: function code G; Predicted neuraminidase (sialidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35491; Mature: 35491
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFLILAVSASLAAQTSEFVADPMPTPSCHASTIVELASGDLMTAWFGGAGEGRPDVAI CEEEEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHEEHHCCCEEEEEECCCCCCCCCEEE WGARRHAGKWQPPVELAREPNIATWNPVLFHSGDGLLWLYYKFGPSPQQWTAARMWSRDD EECCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHCCCCC GVTWSKAEHLPAGLYGAIRAKPLVLPKGLIVSGSSVESYNSWAAWVERSTDFGKTWTRHG CCCCCCCCCCCCCHHHHHCCCEEECCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCC PIVPPEGGIIQPSVVQVEGDHLRFYARSDKAARICVSDSYDAGITWTPARVTELPNPNSG CCCCCCCCEECCEEEEEECCEEEEEEECCCEEEEEEECCCCCCEEECCHHEECCCCCCCC IDVVRLKDGRYLAVYNHIPRGRTPLNLAISNDGDHWTPLKTLESDPGEYSYPAMIQASDG EEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEECCC LIHITYTWRRQKIKHVEVRVK EEEEEEEECCCCEEEEEEEEC >Mature Secondary Structure MKLFLILAVSASLAAQTSEFVADPMPTPSCHASTIVELASGDLMTAWFGGAGEGRPDVAI CEEEEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHEEHHCCCEEEEEECCCCCCCCCEEE WGARRHAGKWQPPVELAREPNIATWNPVLFHSGDGLLWLYYKFGPSPQQWTAARMWSRDD EECCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHCCCCC GVTWSKAEHLPAGLYGAIRAKPLVLPKGLIVSGSSVESYNSWAAWVERSTDFGKTWTRHG CCCCCCCCCCCCCHHHHHCCCEEECCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCC PIVPPEGGIIQPSVVQVEGDHLRFYARSDKAARICVSDSYDAGITWTPARVTELPNPNSG CCCCCCCCEECCEEEEEECCEEEEEEECCCEEEEEEECCCCCCEEECCHHEECCCCCCCC IDVVRLKDGRYLAVYNHIPRGRTPLNLAISNDGDHWTPLKTLESDPGEYSYPAMIQASDG EEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEECCC LIHITYTWRRQKIKHVEVRVK EEEEEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA