| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116623653
Identifier: 116623653
GI number: 116623653
Start: 5774544
End: 5776691
Strand: Direct
Name: 116623653
Synonym: Acid_4565
Alternate gene names: NA
Gene position: 5774544-5776691 (Clockwise)
Preceding gene: 116623652
Following gene: 116623663
Centisome position: 57.94
GC content: 62.2
Gene sequence:
>2148_bases ATGCGAGCGATCGTCTCCACACTTTTGAGCGGAATGCTGATACTTTCGGCGCAGCCGCCCCAGACCCAACAGGACACTCC GGCGGCAGCGTCGTCGAACAAGACCGTCAAGTTCGGCACCACGCTGCAATTGGTGCTGGTGGATATCTCGGTGAAGGACA AGAGCGGCCAGCCCATTAAGGGACTCAAACCGAGCGACTTCACCATCCTGGAAGACGGCAAGAAACAGGACGTCAAGATC TTCCAGTTCCAGGAACTGGAAGAGACCGCCGCGCCCGAACCCGTGCCCGCCATCAAAACCACCGCGCCCAAGCCGGTCGA GGCCGCGTCCACGTCCGCGGTCAAGTCCGTGACCGCCAACCAGATCGCGCCTTCCAAACCGGGCGAAGTGAAGTACAAGG ATCGCCGCCTGATGGTGCTCTTCTTCGATATGACGAGCATGCCGGTTCAGGACCAGATTCGCGCCCAGACCGCCGCGCAG AAATTCCTCAAGACGCAGATGACGGCCAGCGACCTGATGGCCATCATGGCGTTTACCAGCGATCTCAAGGTGCTGCAGGA TTTCACCGACGATCGCGACGCGCTGGCCAAGGTCATCAAAGGCCTGACCATCGGCGAAGCCAGCGACCTGGCGGTGGATG GCTCCACCGGCGCCGATAACGAGGAAGACACCGGCGCGGCTTACACGGCCGACGATACCGAGTTCAACATCTTCAATACC GATCGCAAACTCGCCGCGCTGGAATCGGCGGCGCGTATGCTCGGTTCGCTGTCCGAAAAGAAGGCTCTGATTTATTTCGC CAGCGGCGTGAGCAAGACCGGCGTCGATAACGAAGCCCAGTTGCGCGCCACCATCAATTCGGCCGTCCGCAACAACGTCA GCTTCTGGCCCATCGACGCGCGCGGCCTGGTAGCCGCCGCTCCCCTCGGTGATGCGACCAAGGGATCGCCGGGCGGCGGC GGCATGTACTCCGGCAGTTCGGCGCGCTCGCAGCAATCCAGCCAGCAGGGCTCGCAGGAAACGCTCTTCACGCTGGCCGC CGATACCGGCGGCAAGGCGCTGCTCGATAACAACGACCTTGCGATGGGCATCGCCAACGCGCAGAAGGAAATGTCGAGCT ACTACATCCTGGGCTACTACAGCCAGAACGACAAGCTCGACGGCCGCTACCGCCGCATCAAGCTGCAACCCAGCGCGGAC CTGCAGGCCAGGATCAGCAAGCTGGATTACCGCCAGGGATACTTCGCGGGCAAGGAATTCGGCAAATTCAACTCCTCCGA TAAGGAGCGTCAGCTGCAGGAAGCACTCATGCTCGGCGACCCTATGACGGACCTCTCGGTGGCGCTCGAGGTGGACTATT TCCGCCTGGCGCGCGACCGTTACTTCGTGCCGGTGACCGTCAAGATTCCCGGCGCGGAACTCGAACTCGCCAAGCACGGC GGCGCGGAGACCACCAAGCTGGATTTCATCGGCGAAGTCCGCGACTCCAAGGGAGTGGTGCAGGGCAACGTCCGCGACTA TCAGGAGATCAAACTCAAGGGCGAGACCGCGGGTCAGTTGGGCAAGCGCACGCTCGCTTACGACACGGGCTTCACGCTCG CGCCGGGCACCTACACTCTGAAATTCCTGGCTCGCGAAAACGAGACCGGCAAGATGGGCACCTTCGAAACCAAGTTCGTG ATCCCCGATCTCACCACCCAGTTGAAGTACCTGCCGATCTCGAGCGTGGTGCTGAGCAACCAGCGCCAGGACATGAACAC GGCCCTCGCCACTGCCGAGAAGGATAAGAAACTGATCGCCGCCAACCCGCTGGTGCAGGACAACCAGAAGCTGGTACCGA GCGTGACCCGCGTCTTCAAGAAGGAACAGGACATGTTCGTCTTCCTGGAAGCCTATCAGCCCGACGCCACCGCCACGCAG CCCATCGTCGCCACCGTGAGTTTCTATCGCGGCAAGGTGAAGGCTTTCGAAACCGCGCCGCTCCAGGTCACCGACGGGCT CAACGCCAAGTCGAAGGCCCTCCCCGTCCGCTTCAGCGTGCCGCTTGGCAAACTGGCCCCTGGCCGCTACACCTGCCAGG TCAGCGTCCTCGACCCGGCGGCCCAAAAGTTCGCCTTCTGGCGCGCCCCCATCGTGATGGTGCCGTAG
Upstream 100 bases:
>100_bases GGAAGCAACAACCTGGGACTGCTCGCGGGTGCCAGTAACATGCGCAGTATGTTGGCAACGCTGCGTTTCCGTTTCTAAGC CGAGGGAAAGATTGAAATTT
Downstream 100 bases:
>100_bases GCATTTTGCGCTCGCTCGCGATCGGTGGAATGGCGTTCGATGGAGTGCGAACTGCGCGGCGCGGACCTGACGTGCCGCTC GCTCTTCCCCATCCGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MRAIVSTLLSGMLILSAQPPQTQQDTPAAASSNKTVKFGTTLQLVLVDISVKDKSGQPIKGLKPSDFTILEDGKKQDVKI FQFQELEETAAPEPVPAIKTTAPKPVEAASTSAVKSVTANQIAPSKPGEVKYKDRRLMVLFFDMTSMPVQDQIRAQTAAQ KFLKTQMTASDLMAIMAFTSDLKVLQDFTDDRDALAKVIKGLTIGEASDLAVDGSTGADNEEDTGAAYTADDTEFNIFNT DRKLAALESAARMLGSLSEKKALIYFASGVSKTGVDNEAQLRATINSAVRNNVSFWPIDARGLVAAAPLGDATKGSPGGG GMYSGSSARSQQSSQQGSQETLFTLAADTGGKALLDNNDLAMGIANAQKEMSSYYILGYYSQNDKLDGRYRRIKLQPSAD LQARISKLDYRQGYFAGKEFGKFNSSDKERQLQEALMLGDPMTDLSVALEVDYFRLARDRYFVPVTVKIPGAELELAKHG GAETTKLDFIGEVRDSKGVVQGNVRDYQEIKLKGETAGQLGKRTLAYDTGFTLAPGTYTLKFLARENETGKMGTFETKFV IPDLTTQLKYLPISSVVLSNQRQDMNTALATAEKDKKLIAANPLVQDNQKLVPSVTRVFKKEQDMFVFLEAYQPDATATQ PIVATVSFYRGKVKAFETAPLQVTDGLNAKSKALPVRFSVPLGKLAPGRYTCQVSVLDPAAQKFAFWRAPIVMVP
Sequences:
>Translated_715_residues MRAIVSTLLSGMLILSAQPPQTQQDTPAAASSNKTVKFGTTLQLVLVDISVKDKSGQPIKGLKPSDFTILEDGKKQDVKI FQFQELEETAAPEPVPAIKTTAPKPVEAASTSAVKSVTANQIAPSKPGEVKYKDRRLMVLFFDMTSMPVQDQIRAQTAAQ KFLKTQMTASDLMAIMAFTSDLKVLQDFTDDRDALAKVIKGLTIGEASDLAVDGSTGADNEEDTGAAYTADDTEFNIFNT DRKLAALESAARMLGSLSEKKALIYFASGVSKTGVDNEAQLRATINSAVRNNVSFWPIDARGLVAAAPLGDATKGSPGGG GMYSGSSARSQQSSQQGSQETLFTLAADTGGKALLDNNDLAMGIANAQKEMSSYYILGYYSQNDKLDGRYRRIKLQPSAD LQARISKLDYRQGYFAGKEFGKFNSSDKERQLQEALMLGDPMTDLSVALEVDYFRLARDRYFVPVTVKIPGAELELAKHG GAETTKLDFIGEVRDSKGVVQGNVRDYQEIKLKGETAGQLGKRTLAYDTGFTLAPGTYTLKFLARENETGKMGTFETKFV IPDLTTQLKYLPISSVVLSNQRQDMNTALATAEKDKKLIAANPLVQDNQKLVPSVTRVFKKEQDMFVFLEAYQPDATATQ PIVATVSFYRGKVKAFETAPLQVTDGLNAKSKALPVRFSVPLGKLAPGRYTCQVSVLDPAAQKFAFWRAPIVMVP >Mature_715_residues MRAIVSTLLSGMLILSAQPPQTQQDTPAAASSNKTVKFGTTLQLVLVDISVKDKSGQPIKGLKPSDFTILEDGKKQDVKI FQFQELEETAAPEPVPAIKTTAPKPVEAASTSAVKSVTANQIAPSKPGEVKYKDRRLMVLFFDMTSMPVQDQIRAQTAAQ KFLKTQMTASDLMAIMAFTSDLKVLQDFTDDRDALAKVIKGLTIGEASDLAVDGSTGADNEEDTGAAYTADDTEFNIFNT DRKLAALESAARMLGSLSEKKALIYFASGVSKTGVDNEAQLRATINSAVRNNVSFWPIDARGLVAAAPLGDATKGSPGGG GMYSGSSARSQQSSQQGSQETLFTLAADTGGKALLDNNDLAMGIANAQKEMSSYYILGYYSQNDKLDGRYRRIKLQPSAD LQARISKLDYRQGYFAGKEFGKFNSSDKERQLQEALMLGDPMTDLSVALEVDYFRLARDRYFVPVTVKIPGAELELAKHG GAETTKLDFIGEVRDSKGVVQGNVRDYQEIKLKGETAGQLGKRTLAYDTGFTLAPGTYTLKFLARENETGKMGTFETKFV IPDLTTQLKYLPISSVVLSNQRQDMNTALATAEKDKKLIAANPLVQDNQKLVPSVTRVFKKEQDMFVFLEAYQPDATATQ PIVATVSFYRGKVKAFETAPLQVTDGLNAKSKALPVRFSVPLGKLAPGRYTCQVSVLDPAAQKFAFWRAPIVMVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77654; Mature: 77654
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIVSTLLSGMLILSAQPPQTQQDTPAAASSNKTVKFGTTLQLVLVDISVKDKSGQPIK CHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEECCCCCCCC GLKPSDFTILEDGKKQDVKIFQFQELEETAAPEPVPAIKTTAPKPVEAASTSAVKSVTAN CCCCCCEEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QIAPSKPGEVKYKDRRLMVLFFDMTSMPVQDQIRAQTAAQKFLKTQMTASDLMAIMAFTS CCCCCCCCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DLKVLQDFTDDRDALAKVIKGLTIGEASDLAVDGSTGADNEEDTGAAYTADDTEFNIFNT HHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCEEEEECC DRKLAALESAARMLGSLSEKKALIYFASGVSKTGVDNEAQLRATINSAVRNNVSFWPIDA CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC RGLVAAAPLGDATKGSPGGGGMYSGSSARSQQSSQQGSQETLFTLAADTGGKALLDNNDL CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCE AMGIANAQKEMSSYYILGYYSQNDKLDGRYRRIKLQPSADLQARISKLDYRQGYFAGKEF EEEEHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHH GKFNSSDKERQLQEALMLGDPMTDLSVALEVDYFRLARDRYFVPVTVKIPGAELELAKHG CCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHECCCCEEEEEEEEECCCEEEHHHCC GAETTKLDFIGEVRDSKGVVQGNVRDYQEIKLKGETAGQLGKRTLAYDTGFTLAPGTYTL CCCCEEEEEEEECCCCCCEEECCCCCCEEEEECCCCHHHHCCEEEEECCCCEECCCCEEE KFLARENETGKMGTFETKFVIPDLTTQLKYLPISSVVLSNQRQDMNTALATAEKDKKLIA EEEEECCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEE ANPLVQDNQKLVPSVTRVFKKEQDMFVFLEAYQPDATATQPIVATVSFYRGKVKAFETAP ECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEHHHCCEEEEEECCC LQVTDGLNAKSKALPVRFSVPLGKLAPGRYTCQVSVLDPAAQKFAFWRAPIVMVP EEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCEEECC >Mature Secondary Structure MRAIVSTLLSGMLILSAQPPQTQQDTPAAASSNKTVKFGTTLQLVLVDISVKDKSGQPIK CHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEECCCCCCCC GLKPSDFTILEDGKKQDVKIFQFQELEETAAPEPVPAIKTTAPKPVEAASTSAVKSVTAN CCCCCCEEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH QIAPSKPGEVKYKDRRLMVLFFDMTSMPVQDQIRAQTAAQKFLKTQMTASDLMAIMAFTS CCCCCCCCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DLKVLQDFTDDRDALAKVIKGLTIGEASDLAVDGSTGADNEEDTGAAYTADDTEFNIFNT HHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCEEEEECC DRKLAALESAARMLGSLSEKKALIYFASGVSKTGVDNEAQLRATINSAVRNNVSFWPIDA CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC RGLVAAAPLGDATKGSPGGGGMYSGSSARSQQSSQQGSQETLFTLAADTGGKALLDNNDL CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCE AMGIANAQKEMSSYYILGYYSQNDKLDGRYRRIKLQPSADLQARISKLDYRQGYFAGKEF EEEEHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHH GKFNSSDKERQLQEALMLGDPMTDLSVALEVDYFRLARDRYFVPVTVKIPGAELELAKHG CCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHECCCCEEEEEEEEECCCEEEHHHCC GAETTKLDFIGEVRDSKGVVQGNVRDYQEIKLKGETAGQLGKRTLAYDTGFTLAPGTYTL CCCCEEEEEEEECCCCCCEEECCCCCCEEEEECCCCHHHHCCEEEEECCCCEECCCCEEE KFLARENETGKMGTFETKFVIPDLTTQLKYLPISSVVLSNQRQDMNTALATAEKDKKLIA EEEEECCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEEE ANPLVQDNQKLVPSVTRVFKKEQDMFVFLEAYQPDATATQPIVATVSFYRGKVKAFETAP ECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEHHHCCEEEEEECCC LQVTDGLNAKSKALPVRFSVPLGKLAPGRYTCQVSVLDPAAQKFAFWRAPIVMVP EEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA