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The map label for this gene is ccdC [H]

Identifier: 116623595

GI number: 116623595

Start: 5702697

End: 5703254

Strand: Reverse

Name: ccdC [H]

Synonym: Acid_4505

Alternate gene names: 116623595

Gene position: 5703254-5702697 (Counterclockwise)

Preceding gene: 116623597

Following gene: 116623593

Centisome position: 57.23

GC content: 63.8

Gene sequence:

>558_bases
TTGGACCCTCTGGTTTGCGCGGCAGTTCTTCCTAGTGGTGCGGCGGTCTTCGGCTCTCTGCTCGGCCTGCTTGCCGTAAT
GGCGTGGCGTGTCCAAGAGGCCCGCGGCGCTGTCTCGATCCGCAAGATCGTCATCCCGCCTCTGGGCATGGCCACCGGAT
CCTTCATGTTCGTCGTCCCCGCCTTCCGCATCCCTTGGACCTGGGCGGGCATTGCCTTCCTGACTGGAGCCGTCGGGCTG
GCGTACCCGTTGCTGCTGACCTCGCGCCTGGTGCGCCAGGGCGACGTGGTCATGATGCAGCGCTCCAATGCCTTCTTTAC
GGTAATCCTCGCCCTTGCCGCGATCCGACTGATCGCACGAGGCTATCTCGATACCCTTCTCTCCATGCAGCAGACCGGTG
CGCTGTTCTACTTGCTGGCTTTCGGCATGATCCTGCGCTGGCGCGCCCAGATGCTCCTGGAATACCGGAAACTCACGTGT
GCCGCTATGGCCGGCGCACCTGCGCCCGTTAGTGCCACGCCGCCGGCGGCGAACTCGAGCAGATCCAGTTCTTGTTAG

Upstream 100 bases:

>100_bases
GCCAAATTGACGCAATCGCTGGCACATCAGTCGCCGTCCTCCTCTTGCCAGTGCCCCACGGCGCAGCAGGGCCGCCAAGC
CGAATCGGGTAAAATGTGAT

Downstream 100 bases:

>100_bases
GGCACGTTTCGGTGGAAACGACGGAGCGATGCCTGGTGTGCAAGCAACGCCTCCGGATCAACTCACCCCTGTACCCGGGA
TCGTCGAATTCTGCGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDPLVCAAVLPSGAAVFGSLLGLLAVMAWRVQEARGAVSIRKIVIPPLGMATGSFMFVVPAFRIPWTWAGIAFLTGAVGL
AYPLLLTSRLVRQGDVVMMQRSNAFFTVILALAAIRLIARGYLDTLLSMQQTGALFYLLAFGMILRWRAQMLLEYRKLTC
AAMAGAPAPVSATPPAANSSRSSSC

Sequences:

>Translated_185_residues
MDPLVCAAVLPSGAAVFGSLLGLLAVMAWRVQEARGAVSIRKIVIPPLGMATGSFMFVVPAFRIPWTWAGIAFLTGAVGL
AYPLLLTSRLVRQGDVVMMQRSNAFFTVILALAAIRLIARGYLDTLLSMQQTGALFYLLAFGMILRWRAQMLLEYRKLTC
AAMAGAPAPVSATPPAANSSRSSSC
>Mature_185_residues
MDPLVCAAVLPSGAAVFGSLLGLLAVMAWRVQEARGAVSIRKIVIPPLGMATGSFMFVVPAFRIPWTWAGIAFLTGAVGL
AYPLLLTSRLVRQGDVVMMQRSNAFFTVILALAAIRLIARGYLDTLLSMQQTGALFYLLAFGMILRWRAQMLLEYRKLTC
AAMAGAPAPVSATPPAANSSRSSSC

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 19738; Mature: 19738

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLVCAAVLPSGAAVFGSLLGLLAVMAWRVQEARGAVSIRKIVIPPLGMATGSFMFVVP
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEC
AFRIPWTWAGIAFLTGAVGLAYPLLLTSRLVRQGDVVMMQRSNAFFTVILALAAIRLIAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH
GYLDTLLSMQQTGALFYLLAFGMILRWRAQMLLEYRKLTCAAMAGAPAPVSATPPAANSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RSSSC
CCCCC
>Mature Secondary Structure
MDPLVCAAVLPSGAAVFGSLLGLLAVMAWRVQEARGAVSIRKIVIPPLGMATGSFMFVVP
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCEEEEC
AFRIPWTWAGIAFLTGAVGLAYPLLLTSRLVRQGDVVMMQRSNAFFTVILALAAIRLIAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH
GYLDTLLSMQQTGALFYLLAFGMILRWRAQMLLEYRKLTCAAMAGAPAPVSATPPAANSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RSSSC
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]