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The map label for this gene is 116623573

Identifier: 116623573

GI number: 116623573

Start: 5676049

End: 5676768

Strand: Direct

Name: 116623573

Synonym: Acid_4483

Alternate gene names: NA

Gene position: 5676049-5676768 (Clockwise)

Preceding gene: 116623572

Following gene: 116623574

Centisome position: 56.96

GC content: 57.78

Gene sequence:

>720_bases
ATGCCAAAAAATGATCCCTGGTTTGAGTCAATCGGTGCGGATACTGCACTTTCGCATTCGGAATTGCGCACCCTTCAAGA
GGACGGCTTCGTCGTAACGTGTGGCCCTGTTCCAACTGCGGACTTGACTGGCTTATCGCGCGCTTATGACTCTGCCGTAC
TCCAGGCTGATCCCGCCGATGTGAAGGAGGGTTCCACCACGACACGCGTTCAGGATTTCGCCAATCGTGGACCAGAGTTC
GACGGTCTGTACCTACACGCACAGCTGCTTGGGGCTTGTTGCAAGATCATCAAGGAGCCATTCAGACTAAGCAGTGTCCT
GGCGCGGACGCTGAACCCCGGCAAAGTGCCCAAAAGGCTCCACATCGACTTTCCAAACGACGATGCCGGTTGGCCGATGG
TGGGATTCATCTTCATGATCGACACATTCCGGCCAGAGAACGGGGCCACCTGCTTCCTGCCGGGCTCCCAAGGAATGACT
ACAGCCCCAGATTCATTCGACGGAGTCGTCCCAGCGTGCGGCCCGGCCGGTTCAATGCTTATTTACAACGGATCTGTGTG
GCATGAACATGGGCCGAACCTGACCGACTCCCCTCGGCGGTCCATCCAGGGCGCGTTGATACGACGCACGGAGAAGCCTG
CCATCGACTGGCAAACGCGGATGCGACCAGAGACATTGTCGCGCCTCAGCCCACTCGCGATGTATCTCCTCGGTCTGTGA

Upstream 100 bases:

>100_bases
TAGGGCCGTCGTTGACGAACTGGTCGTCGCCTTGGGCGCCGAAAATCATGAATTCTCAACTCCAAACGGCTAATACCCTT
TGCCCACGAGGAAGAAATGG

Downstream 100 bases:

>100_bases
TCGCTCGCTTCCGTCCACAAGAACACCGACGCGAAGCGTAGCGGAGCCGTGTCGTTCCAGTCTCCGGTCCCTTTGCGACC
CGGTTAGGGGCGCGGCATGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPKNDPWFESIGADTALSHSELRTLQEDGFVVTCGPVPTADLTGLSRAYDSAVLQADPADVKEGSTTTRVQDFANRGPEF
DGLYLHAQLLGACCKIIKEPFRLSSVLARTLNPGKVPKRLHIDFPNDDAGWPMVGFIFMIDTFRPENGATCFLPGSQGMT
TAPDSFDGVVPACGPAGSMLIYNGSVWHEHGPNLTDSPRRSIQGALIRRTEKPAIDWQTRMRPETLSRLSPLAMYLLGL

Sequences:

>Translated_239_residues
MPKNDPWFESIGADTALSHSELRTLQEDGFVVTCGPVPTADLTGLSRAYDSAVLQADPADVKEGSTTTRVQDFANRGPEF
DGLYLHAQLLGACCKIIKEPFRLSSVLARTLNPGKVPKRLHIDFPNDDAGWPMVGFIFMIDTFRPENGATCFLPGSQGMT
TAPDSFDGVVPACGPAGSMLIYNGSVWHEHGPNLTDSPRRSIQGALIRRTEKPAIDWQTRMRPETLSRLSPLAMYLLGL
>Mature_238_residues
PKNDPWFESIGADTALSHSELRTLQEDGFVVTCGPVPTADLTGLSRAYDSAVLQADPADVKEGSTTTRVQDFANRGPEFD
GLYLHAQLLGACCKIIKEPFRLSSVLARTLNPGKVPKRLHIDFPNDDAGWPMVGFIFMIDTFRPENGATCFLPGSQGMTT
APDSFDGVVPACGPAGSMLIYNGSVWHEHGPNLTDSPRRSIQGALIRRTEKPAIDWQTRMRPETLSRLSPLAMYLLGL

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26075; Mature: 25944

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKNDPWFESIGADTALSHSELRTLQEDGFVVTCGPVPTADLTGLSRAYDSAVLQADPAD
CCCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCC
VKEGSTTTRVQDFANRGPEFDGLYLHAQLLGACCKIIKEPFRLSSVLARTLNPGKVPKRL
CCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
HIDFPNDDAGWPMVGFIFMIDTFRPENGATCFLPGSQGMTTAPDSFDGVVPACGPAGSML
EEECCCCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
IYNGSVWHEHGPNLTDSPRRSIQGALIRRTEKPAIDWQTRMRPETLSRLSPLAMYLLGL
EECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKNDPWFESIGADTALSHSELRTLQEDGFVVTCGPVPTADLTGLSRAYDSAVLQADPAD
CCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCC
VKEGSTTTRVQDFANRGPEFDGLYLHAQLLGACCKIIKEPFRLSSVLARTLNPGKVPKRL
CCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
HIDFPNDDAGWPMVGFIFMIDTFRPENGATCFLPGSQGMTTAPDSFDGVVPACGPAGSML
EEECCCCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
IYNGSVWHEHGPNLTDSPRRSIQGALIRRTEKPAIDWQTRMRPETLSRLSPLAMYLLGL
EECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA