| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is oar [H]
Identifier: 116623565
GI number: 116623565
Start: 5665721
End: 5668459
Strand: Direct
Name: oar [H]
Synonym: Acid_4475
Alternate gene names: 116623565
Gene position: 5665721-5668459 (Clockwise)
Preceding gene: 116623563
Following gene: 116623570
Centisome position: 56.85
GC content: 66.16
Gene sequence:
>2739_bases ATGCGTCTGCTCGCGACGTTGGTGTTCCTTCCGTGCGCTGCCTTCGCCCAGGCTTCCATCCAGGGTCTCGTACTCGATCC TTCGGGAGCCGCCGTTCCAGACGCATCCATCGCCGCCACGCTCGACTCCACTGGCGCTACCCGCAATGCGCGCACCGGCG TAGACGGCCGCTACCGGCTCCCCGCGCTCTCCATCGGCACCTACACCATCCGTTGCGATAAATCCGGCTTCCAGCGCGCC GAAGTGCCGCAGGTCTACCTCGCCCTCAATCAAACCTTGGAACAGACCATCCAGCTCAAGCTCGCCACCGCCGGCAGCAG CATCGATGTCCGCGAACAGCCCGAGGCGCTCAACACCACCGCGCCCACCGCCGGCACCGGCATCAGCGGCGAGGTCCTCG AAGAGACTCCCTCGCAGAATCGCAGCTATCTCGGCGTCGTCCTGCTCGCCCCCGGTGTCGCGCCCGCCGCCGGTTCCAAC ACGTTGCGCACCAAGGCCGGCGTGCGCTCCGCTGCACCTGACAGCGGCTTCAGCTTCGCCGGAATGCGCGCCCGCAACAA CAGCCTCTCCATCGATGGCCTGGACAACCGCGACGAAACCAGCGGTTCCAGCCGCGTCGCCGTCGGTCAGGAGGCCGTCG CCGAGTTTCGCGTCACCGCCTCCAACGTCGCTCCCGAATTCGGCGGCGCCGCGGGCGGCAATCTCAATGTGGTCACCCTC TCCGGCTCGAACAAGTTTCACGGCGACGTTAACCTCTTCGCCGCCGACTCCTTCATCGAGGCCCGCAACCCCGAGGCCGA GACTAGCGCCCGTCCCGACCGTCGCCAATACCAGCCCGAGGCCGCGCTCAACGGTCCGCTACGCCGCGACCGCACGTTTT TCGCTGGCACCATCGAGGGCGAGCGCGAATCCGGCCAGGAGTTCTCCGAGATCCCCGGCGCCGGCGTCGCCTCCCGCATC AACGCCGCGCTCGCCCTGCCCATCTACTCGCGCGCCGCCGTCGGTTCCGTCGCCGAAGGACTCTTCCCCACGGAGTCCGT CTCCACCGAGGCCTCCTTCAAGCTCACGCACCGCCTCACCGATTCGCACGAATTGATGGCGCGATACGCCTTCTCCAGCG CCCACATCGATCGCGAAGTTCTCGGGGCCGACAACTTCAGCGAGCAATCTGCTCGCGGCAGCAGCCGCAATCGCGATCAG TCTTTTGCGGCCGGATGGCAGGCTGTCAACGGACCTTTCTTCGTCAACGAACTCCGCTTTCAGTTCGCCCGCCGCTCGCT GGAACTCACCCCTAATTCGCGCGGCGCCCTCCTGGAGATTCCTGGAATGGCCAGCTTCGGCCAATCCCCCGTGCTCAACT CTTCGCGCACCGAAGATCACGTGCAGTTGGTCGAATCGGCCACGTTCGTGCACGGCGCCCACCAGTTCGGATTCGGTGCG TCCCTGCAGCACGTGACGCTCGATGCCCGCCTCGCCGACCGCTTCGCCGGCGTCTTCCTCTTCCCTACGCTCGACGCATT CACGAGCGGCAGGCCCGACGTTTTCCTTCAGGCCTTCGGTGACCCGCACACCCGCTATGCCACGGATCCGGCCGCCTTCT GGGCGCAAGACCAGTGGCGGCCCGGCGCGGGGCTCACCGTAATCGCCGGCCTCCGCTATGAGTTTCAGCGCCTCCCCGCG CCGTTTACCGCCCCAACCCATAACCTCGCCCCGCGCCTCGGAATCGCCTGGCAGCCCCGCGGCCACGGCGCATGGGTCTT CCGCGCCGGCGCCGGCATTTTCTACGATCGCTATCCGCTCGCCTACCTGAATGACGCCATTCAGAAGGATGGCGTCCATG GCTTCGAACAATATGCCGTGGGCGCCGGCGCCCTCCGCATCTTCACGCTCGCCCGCGGCGGCACCCTGCCCGAGCCGGTC GATGTTCTCGCGCACTCCGTCTACCGCCCCGACCCCAGCTTCGACGCCACCCCCACCTACGCGCGCAAATTCACCGCCGG CATGGAACGTTCGCTGGATCCCGATACAACCGTCACCGTCGAGTACATGAACGTCGCCGGCTTCCACCTTCCGCGCCTGC GCAACGCCGCCCTCACGCTGCCCCCGCGGTTCGCGCTCGAGCAAAGTGCCGGATCGCGATACTACGGTGTCAGCGTCACC CTGCACCGCCGCCTCAGCAAGGAGCTCACCTACCTGGTCGGATACACCGCCGGCAGCGCGCGTGACGATGCGTCCGATTT CGACGAGCAGCCCCTCAACCCCTCCAACGCCCGCCTCGATTGGTCGCGCTCACGCCAGTATCAGGCCCACCGCGCCGTCG CCAGCGGCATCTTCGAACTCCCCTTCGACGATATCGGCGCGCCTCAATGGCTCCAGAATCTCGGCAGGAATTTCGACCTC GCACCGGTAGTCTCCGTCGGTAGTCCACGCCCCATCAACGCGCTCTCCACCACTGACCTCAACCGCACCGGCGCTTACCC CCTCACCGCCCGCCCAGCAGGGTTGGACCGCAATCCCTTCTACGAACGAGGCGTCTTCAGTCTCGACCTGCGCGTCACCA AGGGCTTCGTATGGTGGAAGGACCACGGCATTTTCCTCTTCGGGTTAGGGTTCTACAACCTGACCAACCACACCAACGCC CTCCGCGTCAGCCCATACGTCGGGCTTCAGACCTACCGTGGCCTCATCGAGACGTTGAACGCCCGCCAGGCACAGTTCAG CTTTCAATGGGAGTTCTAA
Upstream 100 bases:
>100_bases AAAGCCCTTATGAAACGCTTGACGATTCGCGGTCATCGGCTCGCAGTTTTGACCAAGCCTCCCTGTCTATTGCTGGTTCC TTGGTATCGTAAATTCATTG
Downstream 100 bases:
>100_bases ATTGCTTGAGTGTAGACGCTAAGACTGAGAAGGTCCGCACTTAATAAGTCACTCGGCTCAGCGAGCCGCGTAATGGCCTC ATCAAGGAACTGTTGGTCAA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 912; Mature: 912
Protein sequence:
>912_residues MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRLPALSIGTYTIRCDKSGFQRA EVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTTAPTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSN TLRTKAGVRSAAPDSGFSFAGMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEGERESGQEFSEIPGAGVASRI NAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLTDSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQ SFAAGWQAVNGPFFVNELRFQFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWRPGAGLTVIAGLRYEFQRLPA PFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPLAYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPV DVLAHSVYRPDPSFDATPTYARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFELPFDDIGAPQWLQNLGRNFDL APVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPFYERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNA LRVSPYVGLQTYRGLIETLNARQAQFSFQWEF
Sequences:
>Translated_912_residues MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRLPALSIGTYTIRCDKSGFQRA EVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTTAPTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSN TLRTKAGVRSAAPDSGFSFAGMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEGERESGQEFSEIPGAGVASRI NAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLTDSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQ SFAAGWQAVNGPFFVNELRFQFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWRPGAGLTVIAGLRYEFQRLPA PFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPLAYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPV DVLAHSVYRPDPSFDATPTYARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFELPFDDIGAPQWLQNLGRNFDL APVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPFYERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNA LRVSPYVGLQTYRGLIETLNARQAQFSFQWEF >Mature_912_residues MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRLPALSIGTYTIRCDKSGFQRA EVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTTAPTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSN TLRTKAGVRSAAPDSGFSFAGMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEGERESGQEFSEIPGAGVASRI NAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLTDSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQ SFAAGWQAVNGPFFVNELRFQFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWRPGAGLTVIAGLRYEFQRLPA PFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPLAYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPV DVLAHSVYRPDPSFDATPTYARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFELPFDDIGAPQWLQNLGRNFDL APVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPFYERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNA LRVSPYVGLQTYRGLIETLNARQAQFSFQWEF
Specific function: Required for cellular adhesion during fruiting body formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013784 - InterPro: IPR014766 - InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 98856; Mature: 98856
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRL CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEC PALSIGTYTIRCDKSGFQRAEVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTT CEEEECEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCC APTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSNTLRTKAGVRSAAPDSGFSFA CCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHCCCCCCCCCCCCEEE GMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL EEEECCCCEEECCCCCCCCCCCCCEEEECHHHHHHHEEEHHHCCCCCCCCCCCCEEEEEE SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEG CCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCEEEEEEECC ERESGQEFSEIPGAGVASRINAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLT CCCCCCHHHHCCCCCHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC DSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQSFAAGWQAVNGPFFVNELRF CHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCCCCCCHHHHHCCHHCCCCEEHHHHHH QFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA HHHHCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCC SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWR CEEEEEEHHHHHHHHCCEEEEECHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCC PGAGLTVIAGLRYEFQRLPAPFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPL CCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEECCCCH AYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPVDVLAHSVYRPDPSFDATPTY HHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHH ARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCCEEEEEEEE LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFEL HHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCEEC PFDDIGAPQWLQNLGRNFDLAPVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPF CHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNALRVSPYVGLQTYRGLIETLN HHCCEEEEEEEEEEEEEEEECCCEEEEEECEEECCCCCCEEEECCCCCHHHHHHHHHHHC ARQAQFSFQWEF CCCEEEEEEECC >Mature Secondary Structure MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRL CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEC PALSIGTYTIRCDKSGFQRAEVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTT CEEEECEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCC APTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSNTLRTKAGVRSAAPDSGFSFA CCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHCCCCCCCCCCCCEEE GMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL EEEECCCCEEECCCCCCCCCCCCCEEEECHHHHHHHEEEHHHCCCCCCCCCCCCEEEEEE SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEG CCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCEEEEEEECC ERESGQEFSEIPGAGVASRINAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLT CCCCCCHHHHCCCCCHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC DSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQSFAAGWQAVNGPFFVNELRF CHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCCCCCCHHHHHCCHHCCCCEEHHHHHH QFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA HHHHCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCC SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWR CEEEEEEHHHHHHHHCCEEEEECHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCC PGAGLTVIAGLRYEFQRLPAPFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPL CCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEECCCCH AYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPVDVLAHSVYRPDPSFDATPTY HHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHH ARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCCEEEEEEEE LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFEL HHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCEEC PFDDIGAPQWLQNLGRNFDLAPVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPF CHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNALRVSPYVGLQTYRGLIETLN HHCCEEEEEEEEEEEEEEEECCCEEEEEECEEECCCCCCEEEECCCCCHHHHHHHHHHHC ARQAQFSFQWEF CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335633 [H]