Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is oar [H]

Identifier: 116623565

GI number: 116623565

Start: 5665721

End: 5668459

Strand: Direct

Name: oar [H]

Synonym: Acid_4475

Alternate gene names: 116623565

Gene position: 5665721-5668459 (Clockwise)

Preceding gene: 116623563

Following gene: 116623570

Centisome position: 56.85

GC content: 66.16

Gene sequence:

>2739_bases
ATGCGTCTGCTCGCGACGTTGGTGTTCCTTCCGTGCGCTGCCTTCGCCCAGGCTTCCATCCAGGGTCTCGTACTCGATCC
TTCGGGAGCCGCCGTTCCAGACGCATCCATCGCCGCCACGCTCGACTCCACTGGCGCTACCCGCAATGCGCGCACCGGCG
TAGACGGCCGCTACCGGCTCCCCGCGCTCTCCATCGGCACCTACACCATCCGTTGCGATAAATCCGGCTTCCAGCGCGCC
GAAGTGCCGCAGGTCTACCTCGCCCTCAATCAAACCTTGGAACAGACCATCCAGCTCAAGCTCGCCACCGCCGGCAGCAG
CATCGATGTCCGCGAACAGCCCGAGGCGCTCAACACCACCGCGCCCACCGCCGGCACCGGCATCAGCGGCGAGGTCCTCG
AAGAGACTCCCTCGCAGAATCGCAGCTATCTCGGCGTCGTCCTGCTCGCCCCCGGTGTCGCGCCCGCCGCCGGTTCCAAC
ACGTTGCGCACCAAGGCCGGCGTGCGCTCCGCTGCACCTGACAGCGGCTTCAGCTTCGCCGGAATGCGCGCCCGCAACAA
CAGCCTCTCCATCGATGGCCTGGACAACCGCGACGAAACCAGCGGTTCCAGCCGCGTCGCCGTCGGTCAGGAGGCCGTCG
CCGAGTTTCGCGTCACCGCCTCCAACGTCGCTCCCGAATTCGGCGGCGCCGCGGGCGGCAATCTCAATGTGGTCACCCTC
TCCGGCTCGAACAAGTTTCACGGCGACGTTAACCTCTTCGCCGCCGACTCCTTCATCGAGGCCCGCAACCCCGAGGCCGA
GACTAGCGCCCGTCCCGACCGTCGCCAATACCAGCCCGAGGCCGCGCTCAACGGTCCGCTACGCCGCGACCGCACGTTTT
TCGCTGGCACCATCGAGGGCGAGCGCGAATCCGGCCAGGAGTTCTCCGAGATCCCCGGCGCCGGCGTCGCCTCCCGCATC
AACGCCGCGCTCGCCCTGCCCATCTACTCGCGCGCCGCCGTCGGTTCCGTCGCCGAAGGACTCTTCCCCACGGAGTCCGT
CTCCACCGAGGCCTCCTTCAAGCTCACGCACCGCCTCACCGATTCGCACGAATTGATGGCGCGATACGCCTTCTCCAGCG
CCCACATCGATCGCGAAGTTCTCGGGGCCGACAACTTCAGCGAGCAATCTGCTCGCGGCAGCAGCCGCAATCGCGATCAG
TCTTTTGCGGCCGGATGGCAGGCTGTCAACGGACCTTTCTTCGTCAACGAACTCCGCTTTCAGTTCGCCCGCCGCTCGCT
GGAACTCACCCCTAATTCGCGCGGCGCCCTCCTGGAGATTCCTGGAATGGCCAGCTTCGGCCAATCCCCCGTGCTCAACT
CTTCGCGCACCGAAGATCACGTGCAGTTGGTCGAATCGGCCACGTTCGTGCACGGCGCCCACCAGTTCGGATTCGGTGCG
TCCCTGCAGCACGTGACGCTCGATGCCCGCCTCGCCGACCGCTTCGCCGGCGTCTTCCTCTTCCCTACGCTCGACGCATT
CACGAGCGGCAGGCCCGACGTTTTCCTTCAGGCCTTCGGTGACCCGCACACCCGCTATGCCACGGATCCGGCCGCCTTCT
GGGCGCAAGACCAGTGGCGGCCCGGCGCGGGGCTCACCGTAATCGCCGGCCTCCGCTATGAGTTTCAGCGCCTCCCCGCG
CCGTTTACCGCCCCAACCCATAACCTCGCCCCGCGCCTCGGAATCGCCTGGCAGCCCCGCGGCCACGGCGCATGGGTCTT
CCGCGCCGGCGCCGGCATTTTCTACGATCGCTATCCGCTCGCCTACCTGAATGACGCCATTCAGAAGGATGGCGTCCATG
GCTTCGAACAATATGCCGTGGGCGCCGGCGCCCTCCGCATCTTCACGCTCGCCCGCGGCGGCACCCTGCCCGAGCCGGTC
GATGTTCTCGCGCACTCCGTCTACCGCCCCGACCCCAGCTTCGACGCCACCCCCACCTACGCGCGCAAATTCACCGCCGG
CATGGAACGTTCGCTGGATCCCGATACAACCGTCACCGTCGAGTACATGAACGTCGCCGGCTTCCACCTTCCGCGCCTGC
GCAACGCCGCCCTCACGCTGCCCCCGCGGTTCGCGCTCGAGCAAAGTGCCGGATCGCGATACTACGGTGTCAGCGTCACC
CTGCACCGCCGCCTCAGCAAGGAGCTCACCTACCTGGTCGGATACACCGCCGGCAGCGCGCGTGACGATGCGTCCGATTT
CGACGAGCAGCCCCTCAACCCCTCCAACGCCCGCCTCGATTGGTCGCGCTCACGCCAGTATCAGGCCCACCGCGCCGTCG
CCAGCGGCATCTTCGAACTCCCCTTCGACGATATCGGCGCGCCTCAATGGCTCCAGAATCTCGGCAGGAATTTCGACCTC
GCACCGGTAGTCTCCGTCGGTAGTCCACGCCCCATCAACGCGCTCTCCACCACTGACCTCAACCGCACCGGCGCTTACCC
CCTCACCGCCCGCCCAGCAGGGTTGGACCGCAATCCCTTCTACGAACGAGGCGTCTTCAGTCTCGACCTGCGCGTCACCA
AGGGCTTCGTATGGTGGAAGGACCACGGCATTTTCCTCTTCGGGTTAGGGTTCTACAACCTGACCAACCACACCAACGCC
CTCCGCGTCAGCCCATACGTCGGGCTTCAGACCTACCGTGGCCTCATCGAGACGTTGAACGCCCGCCAGGCACAGTTCAG
CTTTCAATGGGAGTTCTAA

Upstream 100 bases:

>100_bases
AAAGCCCTTATGAAACGCTTGACGATTCGCGGTCATCGGCTCGCAGTTTTGACCAAGCCTCCCTGTCTATTGCTGGTTCC
TTGGTATCGTAAATTCATTG

Downstream 100 bases:

>100_bases
ATTGCTTGAGTGTAGACGCTAAGACTGAGAAGGTCCGCACTTAATAAGTCACTCGGCTCAGCGAGCCGCGTAATGGCCTC
ATCAAGGAACTGTTGGTCAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 912; Mature: 912

Protein sequence:

>912_residues
MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRLPALSIGTYTIRCDKSGFQRA
EVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTTAPTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSN
TLRTKAGVRSAAPDSGFSFAGMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL
SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEGERESGQEFSEIPGAGVASRI
NAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLTDSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQ
SFAAGWQAVNGPFFVNELRFQFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA
SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWRPGAGLTVIAGLRYEFQRLPA
PFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPLAYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPV
DVLAHSVYRPDPSFDATPTYARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT
LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFELPFDDIGAPQWLQNLGRNFDL
APVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPFYERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNA
LRVSPYVGLQTYRGLIETLNARQAQFSFQWEF

Sequences:

>Translated_912_residues
MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRLPALSIGTYTIRCDKSGFQRA
EVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTTAPTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSN
TLRTKAGVRSAAPDSGFSFAGMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL
SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEGERESGQEFSEIPGAGVASRI
NAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLTDSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQ
SFAAGWQAVNGPFFVNELRFQFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA
SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWRPGAGLTVIAGLRYEFQRLPA
PFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPLAYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPV
DVLAHSVYRPDPSFDATPTYARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT
LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFELPFDDIGAPQWLQNLGRNFDL
APVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPFYERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNA
LRVSPYVGLQTYRGLIETLNARQAQFSFQWEF
>Mature_912_residues
MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRLPALSIGTYTIRCDKSGFQRA
EVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTTAPTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSN
TLRTKAGVRSAAPDSGFSFAGMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL
SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEGERESGQEFSEIPGAGVASRI
NAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLTDSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQ
SFAAGWQAVNGPFFVNELRFQFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA
SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWRPGAGLTVIAGLRYEFQRLPA
PFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPLAYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPV
DVLAHSVYRPDPSFDATPTYARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT
LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFELPFDDIGAPQWLQNLGRNFDL
APVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPFYERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNA
LRVSPYVGLQTYRGLIETLNARQAQFSFQWEF

Specific function: Required for cellular adhesion during fruiting body formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013784
- InterPro:   IPR014766
- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 98856; Mature: 98856

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRL
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEC
PALSIGTYTIRCDKSGFQRAEVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTT
CEEEECEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCC
APTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSNTLRTKAGVRSAAPDSGFSFA
CCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHCCCCCCCCCCCCEEE
GMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL
EEEECCCCEEECCCCCCCCCCCCCEEEECHHHHHHHEEEHHHCCCCCCCCCCCCEEEEEE
SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEG
CCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCEEEEEEECC
ERESGQEFSEIPGAGVASRINAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLT
CCCCCCHHHHCCCCCHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
DSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQSFAAGWQAVNGPFFVNELRF
CHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCCCCCCHHHHHCCHHCCCCEEHHHHHH
QFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA
HHHHCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCC
SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWR
CEEEEEEHHHHHHHHCCEEEEECHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCC
PGAGLTVIAGLRYEFQRLPAPFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPL
CCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEECCCCH
AYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPVDVLAHSVYRPDPSFDATPTY
HHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHH
ARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCCEEEEEEEE
LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFEL
HHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCEEC
PFDDIGAPQWLQNLGRNFDLAPVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPF
CHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNALRVSPYVGLQTYRGLIETLN
HHCCEEEEEEEEEEEEEEEECCCEEEEEECEEECCCCCCEEEECCCCCHHHHHHHHHHHC
ARQAQFSFQWEF
CCCEEEEEEECC
>Mature Secondary Structure
MRLLATLVFLPCAAFAQASIQGLVLDPSGAAVPDASIAATLDSTGATRNARTGVDGRYRL
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEC
PALSIGTYTIRCDKSGFQRAEVPQVYLALNQTLEQTIQLKLATAGSSIDVREQPEALNTT
CEEEECEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCC
APTAGTGISGEVLEETPSQNRSYLGVVLLAPGVAPAAGSNTLRTKAGVRSAAPDSGFSFA
CCCCCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHCCCCCCCCCCCCEEE
GMRARNNSLSIDGLDNRDETSGSSRVAVGQEAVAEFRVTASNVAPEFGGAAGGNLNVVTL
EEEECCCCEEECCCCCCCCCCCCCEEEECHHHHHHHEEEHHHCCCCCCCCCCCCEEEEEE
SGSNKFHGDVNLFAADSFIEARNPEAETSARPDRRQYQPEAALNGPLRRDRTFFAGTIEG
CCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCEEEEEEECC
ERESGQEFSEIPGAGVASRINAALALPIYSRAAVGSVAEGLFPTESVSTEASFKLTHRLT
CCCCCCHHHHCCCCCHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
DSHELMARYAFSSAHIDREVLGADNFSEQSARGSSRNRDQSFAAGWQAVNGPFFVNELRF
CHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCCCCCCHHHHHCCHHCCCCEEHHHHHH
QFARRSLELTPNSRGALLEIPGMASFGQSPVLNSSRTEDHVQLVESATFVHGAHQFGFGA
HHHHCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCC
SLQHVTLDARLADRFAGVFLFPTLDAFTSGRPDVFLQAFGDPHTRYATDPAAFWAQDQWR
CEEEEEEHHHHHHHHCCEEEEECHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCC
PGAGLTVIAGLRYEFQRLPAPFTAPTHNLAPRLGIAWQPRGHGAWVFRAGAGIFYDRYPL
CCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCEEECCCCH
AYLNDAIQKDGVHGFEQYAVGAGALRIFTLARGGTLPEPVDVLAHSVYRPDPSFDATPTY
HHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHH
ARKFTAGMERSLDPDTTVTVEYMNVAGFHLPRLRNAALTLPPRFALEQSAGSRYYGVSVT
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCCEEEEEEEE
LHRRLSKELTYLVGYTAGSARDDASDFDEQPLNPSNARLDWSRSRQYQAHRAVASGIFEL
HHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCEEC
PFDDIGAPQWLQNLGRNFDLAPVVSVGSPRPINALSTTDLNRTGAYPLTARPAGLDRNPF
CHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YERGVFSLDLRVTKGFVWWKDHGIFLFGLGFYNLTNHTNALRVSPYVGLQTYRGLIETLN
HHCCEEEEEEEEEEEEEEEECCCEEEEEECEEECCCCCCEEEECCCCCHHHHHHHHHHHC
ARQAQFSFQWEF
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8335633 [H]