Click here to switch to the map view.

The map label for this gene is 116623542

Identifier: 116623542

GI number: 116623542

Start: 5638689

End: 5639615

Strand: Direct

Name: 116623542

Synonym: Acid_4452

Alternate gene names: NA

Gene position: 5638689-5639615 (Clockwise)

Preceding gene: 116623536

Following gene: 116623543

Centisome position: 56.58

GC content: 60.52

Gene sequence:

>927_bases
ATGAAGATTTCGAGACGCGCGATTCTGGCGGGCGGAGCGCTGCTCTTCAGCGGCCCGGCATCGGGGAAATCCAAGCTGAA
AGTCTCGGTATTTTCCAAGCACCTGCAGTTTTTGCAGGGCGAGGAACTGGCCAAAGCGACGGCGGCCATCGGCTTCGACG
GCGTGGACCTGGCGGTGCGCAAAGGTGGACACGTCGAGCCGGCCACGGTGGCGAAAGATCTGCCCGCGCTGGTGGCGATC
CTCCGGAAAAACGGGCTCGAAGTGCCGATGATCACAACCGACATCGCGGATACCGATACGCCCTTCACGGAGGATTTGCT
CAAAGCCGCGTCGGCGCTAGGAATTCGCTACTACCGGTTCGGCGCGTACAAGTGGTCGGCGGAGAAGCCCTATGCGGCGC
AATTGGAAATCATGAAGCCGAAGCTCGCGAAACTCGCCGCGCTCAACGCAAAATACCAGATGTGCGCGATGTACCACACG
CACTCCGGCGTGGGCGTGGTGGGAGCGTCCATTTGGGATCTTTGGTACATGATGAAGGACCTGGACCCGAAGCTGATGGG
AATGAATTACGACGTCGGGCACGCCACCATCGAAGGCGGCCTGGGCGGCTGGATCGACAGCTTCAAGATCGCGGGAAATT
ACGTGCGGGGCATCGCGGTGAAAGATTTCGCCTGGGAGAAGGACCCGAAGGGCGGGCAGCGTTCCCAGTGGAAACCGATT
GGCGAGGGCACGGTGAAGTTCCCGCAGTTCTACGGAATGGTGGCGGCGACGGATTTCGCAGGGCCATTCCAAATGCATTT
CGAGTATCCGCTCGGCGGAGCCAATAACGGCACGCGCACCTTGACCGTTCCGAAGGAAGAAGTCCACGCAGCGATGAAGA
AGGATCTGGACAAGACGCGCGCGATGCTGGCACAGGCCGGGCTATGA

Upstream 100 bases:

>100_bases
GCGTGTGCGGCGAGCGCGCCTGCGCCCGCAAGCAGGAAACTTCTACGGCCTATTGGCATAAGGTTATGATAAGTCCGTGA
GCGCTAAAGAGGGAACATCC

Downstream 100 bases:

>100_bases
AACGTCGGGTCTTTCTCGCCATGCCTGCTCTGCTTGCGGCGGCGCCATCCACCGATGCCCGCATCGACGAACTGACCATC
GCGTTCGAGGACTTCCGCTA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; TIM Barrel Domain-Containing Protein; Signal Peptide

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKISRRAILAGGALLFSGPASGKSKLKVSVFSKHLQFLQGEELAKATAAIGFDGVDLAVRKGGHVEPATVAKDLPALVAI
LRKNGLEVPMITTDIADTDTPFTEDLLKAASALGIRYYRFGAYKWSAEKPYAAQLEIMKPKLAKLAALNAKYQMCAMYHT
HSGVGVVGASIWDLWYMMKDLDPKLMGMNYDVGHATIEGGLGGWIDSFKIAGNYVRGIAVKDFAWEKDPKGGQRSQWKPI
GEGTVKFPQFYGMVAATDFAGPFQMHFEYPLGGANNGTRTLTVPKEEVHAAMKKDLDKTRAMLAQAGL

Sequences:

>Translated_308_residues
MKISRRAILAGGALLFSGPASGKSKLKVSVFSKHLQFLQGEELAKATAAIGFDGVDLAVRKGGHVEPATVAKDLPALVAI
LRKNGLEVPMITTDIADTDTPFTEDLLKAASALGIRYYRFGAYKWSAEKPYAAQLEIMKPKLAKLAALNAKYQMCAMYHT
HSGVGVVGASIWDLWYMMKDLDPKLMGMNYDVGHATIEGGLGGWIDSFKIAGNYVRGIAVKDFAWEKDPKGGQRSQWKPI
GEGTVKFPQFYGMVAATDFAGPFQMHFEYPLGGANNGTRTLTVPKEEVHAAMKKDLDKTRAMLAQAGL
>Mature_308_residues
MKISRRAILAGGALLFSGPASGKSKLKVSVFSKHLQFLQGEELAKATAAIGFDGVDLAVRKGGHVEPATVAKDLPALVAI
LRKNGLEVPMITTDIADTDTPFTEDLLKAASALGIRYYRFGAYKWSAEKPYAAQLEIMKPKLAKLAALNAKYQMCAMYHT
HSGVGVVGASIWDLWYMMKDLDPKLMGMNYDVGHATIEGGLGGWIDSFKIAGNYVRGIAVKDFAWEKDPKGGQRSQWKPI
GEGTVKFPQFYGMVAATDFAGPFQMHFEYPLGGANNGTRTLTVPKEEVHAAMKKDLDKTRAMLAQAGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33420; Mature: 33420

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISRRAILAGGALLFSGPASGKSKLKVSVFSKHLQFLQGEELAKATAAIGFDGVDLAVR
CCCCCCEEEECCEEEEECCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEC
KGGHVEPATVAKDLPALVAILRKNGLEVPMITTDIADTDTPFTEDLLKAASALGIRYYRF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCEEEEEE
GAYKWSAEKPYAAQLEIMKPKLAKLAALNAKYQMCAMYHTHSGVGVVGASIWDLWYMMKD
EEEEECCCCCCHHHHEECCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
LDPKLMGMNYDVGHATIEGGLGGWIDSFKIAGNYVRGIAVKDFAWEKDPKGGQRSQWKPI
CCHHHCCCCCCCCCEEECCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
GEGTVKFPQFYGMVAATDFAGPFQMHFEYPLGGANNGTRTLTVPKEEVHAAMKKDLDKTR
CCCCEECHHHHCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
AMLAQAGL
HHHHHCCC
>Mature Secondary Structure
MKISRRAILAGGALLFSGPASGKSKLKVSVFSKHLQFLQGEELAKATAAIGFDGVDLAVR
CCCCCCEEEECCEEEEECCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEC
KGGHVEPATVAKDLPALVAILRKNGLEVPMITTDIADTDTPFTEDLLKAASALGIRYYRF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCEEEEEE
GAYKWSAEKPYAAQLEIMKPKLAKLAALNAKYQMCAMYHTHSGVGVVGASIWDLWYMMKD
EEEEECCCCCCHHHHEECCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
LDPKLMGMNYDVGHATIEGGLGGWIDSFKIAGNYVRGIAVKDFAWEKDPKGGQRSQWKPI
CCHHHCCCCCCCCCEEECCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
GEGTVKFPQFYGMVAATDFAGPFQMHFEYPLGGANNGTRTLTVPKEEVHAAMKKDLDKTR
CCCCEECHHHHCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
AMLAQAGL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA