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The map label for this gene is yjeA [H]

Identifier: 116623520

GI number: 116623520

Start: 5603605

End: 5606304

Strand: Reverse

Name: yjeA [H]

Synonym: Acid_4430

Alternate gene names: 116623520

Gene position: 5606304-5603605 (Counterclockwise)

Preceding gene: 116623521

Following gene: 116623519

Centisome position: 56.26

GC content: 62.44

Gene sequence:

>2700_bases
ATGAATCGCCTGGTTGTTCCACTTACACTCAACCGGAAGAAGCTTGTTCTTCTGACTGCCGCCCTCGTCGCCATCGCTTC
GCTTGCGATGTGGGTGCGGCCCCAGCGTTACCTGCAGCCGCGGTTTCAAGCTGACGCCGCGCTGGATAGCGCCTTTCACT
CCGTGACGACGGATTACCGGGAGATCATCGTTCTGATGGATGGCGCGGAGACGCTGGACGATGCGGCTCGCGAACGATGC
CGCAACGCGGGCCGCCAAATCTTCTTCCGCAAGCAGCAGGCGATCGAAGGGCTCAAGCAGAGGCTCGGCGCGCGTGGCGG
CGAGAATGGCATCCGGCAGCTGGTTCAGTACCTCACGACGGGCGCCGGGCTGCACGATGCCGATAAGCTGGCGTTTTTGG
ATCTGGTGGATGACCTGCAGCGGCCGGACGACCGCGGCCCGCTGAGCGGCTCCGTGAAGGGCCTGCTGGACAATCTGCAA
TCGATCCAACTGGCGTACCGCGAAGAAGTGACGCGGATCTTCTCTCAGTTTGGAACGCGCGGGGCGGCACCGGCGCGCGA
GAAGTGGGATAGGTATGTGCGCGCGCTGCGGCAGCAGTTCAGCCGCGAGAAGATCCTGGGCGAATTCGGCGAGCCGGTGC
CGGAGCCGGAGGAAGGGCTTCGGGGCGGCGTCTCGCGCGAGATTTTCGGGAACGAGTTCGCGCCCAAGAGCGTGGCGCTG
ACATTCGACGATGGGCCGCATCCGAAATACACCGACCAGATACTCGCGCTGCTGAGGAAGTACGGCCTGCGCGCCTGCTT
TTTCGAATTGGGCATGAACCTGGGAACGGTGGAAGGCAACGAGGCACGCCTCTCGGCGGGCGCCGCGGTTTCCCGCCGGG
TGTTGGATGCGGGGCACGTGATCGCCAATCATAGCTACTCGCACCCGGTCCTGCCGAAGCTGACGGAGACCGCGCGCGAC
AGCGAAATCGACCGGACCTCGCTGTTGCTGGAAAAGGTGGCGGGGCATAAGCCCGATCTCTTCCGCGCGCCGTATGGAGC
TCGCAACAAGGAAATCATCGATCGCGTGACCAATGAAGGGCTGCACTCGGTGATGTGGACGATCGATTCGCTGGATTGGG
CGGACCCGATTCCGGAGTCGGTGGCGATGCGGGTGCTGCACGATCTCAACGTGAAGCAGAAAGGCATCATCCTCTTTCAC
GATATTCACAAGCAGGGCGTGATGGCGTTATCGCCAGTGATCGAAGAGCTGCAGCGCCAGGAGTACACGTTCCTTTCCTA
CAGCGGCGGGCACTTCGTGAAGGCCGAGGCGCCGCAGGTGACCGAGCGCTCGCCATCCCCGGGCGAAGGGCCTGCACCCG
CGGCGGTGCCGGTTGCAGGCGCCAAGGCACCCTATTACCGGGATAGCTGGGCAGTGATCGTGGGCGTGAACGACTATCAG
ACGTGGCCCAAACTTCGCTACGCGGTGAATGATGCGACCGCGGTGGAAGAAGCGCTGGTTAACAAATTCGGCTTCCAGCG
CGACCACATCCGCAAACTGATTAACCAGGACGCCACCCGTCAGCGCATCATGCAGGTTTTGGGCGATGAATTCACCGATG
GCAACAAGGTAAAGCGGGAAGACCGGGTATTTTTCTTCTTCGCCGGGCACGGCGCCACGCGGACCTTCGCCGACGGGCGT
CAGATCGGCTTCATCGTGCCGGTGGACGCGGATCGCGAGAACTATCTCTCCACCGCGATCAGCATGACCCAGCTGCGCGA
TGCCAGCGACCTGATTGCGGCCAAGCACATCTATTTCGTGATGGACTCCTGTTACAGCGGCCTGGCGCTCTCGCGCGGAG
CTGGCGCTTTCTCGCGCGACCACAGCTACCTGGAAGAGGTCACGCGCCGCACGGCACGGCAGATCCTGACGGCGGGCGGC
GCCGATCAGCAGGTGGCCGACGATGGGCCGAACGGTCACTCGGTGTTCACGTGGGCGCTGCTGCAGGGTTTGGACGGCAA
GGCCGATCTGGATGGCAATGGCGTGATCACGGCTTCGGAACTCGGCGCGTACATCAGTCCGATCGTGGCGTCGTTTTCGA
AGCAGACGCCGTCGGTGGGCAATATGGTGGGCAGCGAGGGCGGCGAATTCCTGTTCGAATTGCAGCCCGAGGCCCTGACG
TCGGCCACGGTCAAACAGGACACGAAGGCGGTCAAACTCAACGAGGAACTGGTGACGCTGGAGAAGGAGGTCTCGGCCAA
GCAGGCCGAATTGCTCCGGCTGCAGGAGAGCGTGCAGGCGGAGACCGTGAGGCTTTCCCAACTGCGCGGCTCCGAGGCGC
GTCCCGCGCCGGCTACCAGGAGCGTTTCCAAAGCCTACGATCTGGATCGCCAGGCTCGCGATTTGTTCCGCGCGCGGAAA
CTGGACGAGGCGCTGAAGAAATCGCAGGAGGCGGTGAAGCTGAAGCCGAACGATCCGATTCTGCTCAACAATCTGGGTTT
CCTCTACTTTGCGATGGGTCGGAATGACGAGGCCGCGACTTACCTGGAGAAGACACTGCAACTGGATCCGAAGCGTAAAG
AGGCGCACGGCAATATCGCCGAGGTGTATTTGAAGATGGGCCGGAAGCCGGAGGCCAAGCAGCACTATGAAGAGTATCTG
AGGCTTTACCCGGCGTCGCCGAAGGCCGAGGAGTTTCGCCGCATTTTGCATACGCTCTGA

Upstream 100 bases:

>100_bases
TCCACCTCACGTTCCTGGTCAATTTCTTCGACGAATTGAAGCGGCGGGTACCGGTCGCGGGGAAGTGAGCAGCGTGCATA
GAATGTAGGTTGGCCATTCT

Downstream 100 bases:

>100_bases
CGGGAGTACTGCCATGTCGAAAGAGTTGACGCGCACTACAGATGATGTGGCTCGCCGCCGCTGGGGCTTCGAGGCGAATA
CGATCGCGTTTCCGACGGCG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 899; Mature: 899

Protein sequence:

>899_residues
MNRLVVPLTLNRKKLVLLTAALVAIASLAMWVRPQRYLQPRFQADAALDSAFHSVTTDYREIIVLMDGAETLDDAARERC
RNAGRQIFFRKQQAIEGLKQRLGARGGENGIRQLVQYLTTGAGLHDADKLAFLDLVDDLQRPDDRGPLSGSVKGLLDNLQ
SIQLAYREEVTRIFSQFGTRGAAPAREKWDRYVRALRQQFSREKILGEFGEPVPEPEEGLRGGVSREIFGNEFAPKSVAL
TFDDGPHPKYTDQILALLRKYGLRACFFELGMNLGTVEGNEARLSAGAAVSRRVLDAGHVIANHSYSHPVLPKLTETARD
SEIDRTSLLLEKVAGHKPDLFRAPYGARNKEIIDRVTNEGLHSVMWTIDSLDWADPIPESVAMRVLHDLNVKQKGIILFH
DIHKQGVMALSPVIEELQRQEYTFLSYSGGHFVKAEAPQVTERSPSPGEGPAPAAVPVAGAKAPYYRDSWAVIVGVNDYQ
TWPKLRYAVNDATAVEEALVNKFGFQRDHIRKLINQDATRQRIMQVLGDEFTDGNKVKREDRVFFFFAGHGATRTFADGR
QIGFIVPVDADRENYLSTAISMTQLRDASDLIAAKHIYFVMDSCYSGLALSRGAGAFSRDHSYLEEVTRRTARQILTAGG
ADQQVADDGPNGHSVFTWALLQGLDGKADLDGNGVITASELGAYISPIVASFSKQTPSVGNMVGSEGGEFLFELQPEALT
SATVKQDTKAVKLNEELVTLEKEVSAKQAELLRLQESVQAETVRLSQLRGSEARPAPATRSVSKAYDLDRQARDLFRARK
LDEALKKSQEAVKLKPNDPILLNNLGFLYFAMGRNDEAATYLEKTLQLDPKRKEAHGNIAEVYLKMGRKPEAKQHYEEYL
RLYPASPKAEEFRRILHTL

Sequences:

>Translated_899_residues
MNRLVVPLTLNRKKLVLLTAALVAIASLAMWVRPQRYLQPRFQADAALDSAFHSVTTDYREIIVLMDGAETLDDAARERC
RNAGRQIFFRKQQAIEGLKQRLGARGGENGIRQLVQYLTTGAGLHDADKLAFLDLVDDLQRPDDRGPLSGSVKGLLDNLQ
SIQLAYREEVTRIFSQFGTRGAAPAREKWDRYVRALRQQFSREKILGEFGEPVPEPEEGLRGGVSREIFGNEFAPKSVAL
TFDDGPHPKYTDQILALLRKYGLRACFFELGMNLGTVEGNEARLSAGAAVSRRVLDAGHVIANHSYSHPVLPKLTETARD
SEIDRTSLLLEKVAGHKPDLFRAPYGARNKEIIDRVTNEGLHSVMWTIDSLDWADPIPESVAMRVLHDLNVKQKGIILFH
DIHKQGVMALSPVIEELQRQEYTFLSYSGGHFVKAEAPQVTERSPSPGEGPAPAAVPVAGAKAPYYRDSWAVIVGVNDYQ
TWPKLRYAVNDATAVEEALVNKFGFQRDHIRKLINQDATRQRIMQVLGDEFTDGNKVKREDRVFFFFAGHGATRTFADGR
QIGFIVPVDADRENYLSTAISMTQLRDASDLIAAKHIYFVMDSCYSGLALSRGAGAFSRDHSYLEEVTRRTARQILTAGG
ADQQVADDGPNGHSVFTWALLQGLDGKADLDGNGVITASELGAYISPIVASFSKQTPSVGNMVGSEGGEFLFELQPEALT
SATVKQDTKAVKLNEELVTLEKEVSAKQAELLRLQESVQAETVRLSQLRGSEARPAPATRSVSKAYDLDRQARDLFRARK
LDEALKKSQEAVKLKPNDPILLNNLGFLYFAMGRNDEAATYLEKTLQLDPKRKEAHGNIAEVYLKMGRKPEAKQHYEEYL
RLYPASPKAEEFRRILHTL
>Mature_899_residues
MNRLVVPLTLNRKKLVLLTAALVAIASLAMWVRPQRYLQPRFQADAALDSAFHSVTTDYREIIVLMDGAETLDDAARERC
RNAGRQIFFRKQQAIEGLKQRLGARGGENGIRQLVQYLTTGAGLHDADKLAFLDLVDDLQRPDDRGPLSGSVKGLLDNLQ
SIQLAYREEVTRIFSQFGTRGAAPAREKWDRYVRALRQQFSREKILGEFGEPVPEPEEGLRGGVSREIFGNEFAPKSVAL
TFDDGPHPKYTDQILALLRKYGLRACFFELGMNLGTVEGNEARLSAGAAVSRRVLDAGHVIANHSYSHPVLPKLTETARD
SEIDRTSLLLEKVAGHKPDLFRAPYGARNKEIIDRVTNEGLHSVMWTIDSLDWADPIPESVAMRVLHDLNVKQKGIILFH
DIHKQGVMALSPVIEELQRQEYTFLSYSGGHFVKAEAPQVTERSPSPGEGPAPAAVPVAGAKAPYYRDSWAVIVGVNDYQ
TWPKLRYAVNDATAVEEALVNKFGFQRDHIRKLINQDATRQRIMQVLGDEFTDGNKVKREDRVFFFFAGHGATRTFADGR
QIGFIVPVDADRENYLSTAISMTQLRDASDLIAAKHIYFVMDSCYSGLALSRGAGAFSRDHSYLEEVTRRTARQILTAGG
ADQQVADDGPNGHSVFTWALLQGLDGKADLDGNGVITASELGAYISPIVASFSKQTPSVGNMVGSEGGEFLFELQPEALT
SATVKQDTKAVKLNEELVTLEKEVSAKQAELLRLQESVQAETVRLSQLRGSEARPAPATRSVSKAYDLDRQARDLFRARK
LDEALKKSQEAVKLKPNDPILLNNLGFLYFAMGRNDEAATYLEKTLQLDPKRKEAHGNIAEVYLKMGRKPEAKQHYEEYL
RLYPASPKAEEFRRILHTL

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=166, Percent_Identity=33.7349397590361, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6323339, Length=174, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 100058; Mature: 100058

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS00018 EF_HAND_1 ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLVVPLTLNRKKLVLLTAALVAIASLAMWVRPQRYLQPRFQADAALDSAFHSVTTDYR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCC
EIIVLMDGAETLDDAARERCRNAGRQIFFRKQQAIEGLKQRLGARGGENGIRQLVQYLTT
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GAGLHDADKLAFLDLVDDLQRPDDRGPLSGSVKGLLDNLQSIQLAYREEVTRIFSQFGTR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAAPAREKWDRYVRALRQQFSREKILGEFGEPVPEPEEGLRGGVSREIFGNEFAPKSVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCCCCEEEE
TFDDGPHPKYTDQILALLRKYGLRACFFELGMNLGTVEGNEARLSAGAAVSRRVLDAGHV
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH
IANHSYSHPVLPKLTETARDSEIDRTSLLLEKVAGHKPDLFRAPYGARNKEIIDRVTNEG
EECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LHSVMWTIDSLDWADPIPESVAMRVLHDLNVKQKGIILFHDIHKQGVMALSPVIEELQRQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
EYTFLSYSGGHFVKAEAPQVTERSPSPGEGPAPAAVPVAGAKAPYYRDSWAVIVGVNDYQ
CCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
TWPKLRYAVNDATAVEEALVNKFGFQRDHIRKLINQDATRQRIMQVLGDEFTDGNKVKRE
CCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
DRVFFFFAGHGATRTFADGRQIGFIVPVDADRENYLSTAISMTQLRDASDLIAAKHIYFV
CCEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MDSCYSGLALSRGAGAFSRDHSYLEEVTRRTARQILTAGGADQQVADDGPNGHSVFTWAL
HHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LQGLDGKADLDGNGVITASELGAYISPIVASFSKQTPSVGNMVGSEGGEFLFELQPEALT
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCHHHH
SATVKQDTKAVKLNEELVTLEKEVSAKQAELLRLQESVQAETVRLSQLRGSEARPAPATR
HHHHHHCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SVSKAYDLDRQARDLFRARKLDEALKKSQEAVKLKPNDPILLNNLGFLYFAMGRNDEAAT
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCEEEEEECCCCHHHH
YLEKTLQLDPKRKEAHGNIAEVYLKMGRKPEAKQHYEEYLRLYPASPKAEEFRRILHTL
HHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNRLVVPLTLNRKKLVLLTAALVAIASLAMWVRPQRYLQPRFQADAALDSAFHSVTTDYR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCC
EIIVLMDGAETLDDAARERCRNAGRQIFFRKQQAIEGLKQRLGARGGENGIRQLVQYLTT
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GAGLHDADKLAFLDLVDDLQRPDDRGPLSGSVKGLLDNLQSIQLAYREEVTRIFSQFGTR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAAPAREKWDRYVRALRQQFSREKILGEFGEPVPEPEEGLRGGVSREIFGNEFAPKSVAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCCCCEEEE
TFDDGPHPKYTDQILALLRKYGLRACFFELGMNLGTVEGNEARLSAGAAVSRRVLDAGHV
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH
IANHSYSHPVLPKLTETARDSEIDRTSLLLEKVAGHKPDLFRAPYGARNKEIIDRVTNEG
EECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LHSVMWTIDSLDWADPIPESVAMRVLHDLNVKQKGIILFHDIHKQGVMALSPVIEELQRQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
EYTFLSYSGGHFVKAEAPQVTERSPSPGEGPAPAAVPVAGAKAPYYRDSWAVIVGVNDYQ
CCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
TWPKLRYAVNDATAVEEALVNKFGFQRDHIRKLINQDATRQRIMQVLGDEFTDGNKVKRE
CCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
DRVFFFFAGHGATRTFADGRQIGFIVPVDADRENYLSTAISMTQLRDASDLIAAKHIYFV
CCEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MDSCYSGLALSRGAGAFSRDHSYLEEVTRRTARQILTAGGADQQVADDGPNGHSVFTWAL
HHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LQGLDGKADLDGNGVITASELGAYISPIVASFSKQTPSVGNMVGSEGGEFLFELQPEALT
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCHHHH
SATVKQDTKAVKLNEELVTLEKEVSAKQAELLRLQESVQAETVRLSQLRGSEARPAPATR
HHHHHHCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SVSKAYDLDRQARDLFRARKLDEALKKSQEAVKLKPNDPILLNNLGFLYFAMGRNDEAAT
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCEEEEEECCCCHHHH
YLEKTLQLDPKRKEAHGNIAEVYLKMGRKPEAKQHYEEYLRLYPASPKAEEFRRILHTL
HHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]