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The map label for this gene is yccS [C]

Identifier: 116623481

GI number: 116623481

Start: 5555020

End: 5557149

Strand: Direct

Name: yccS [C]

Synonym: Acid_4391

Alternate gene names: 116623481

Gene position: 5555020-5557149 (Clockwise)

Preceding gene: 116623480

Following gene: 116623482

Centisome position: 55.74

GC content: 67.18

Gene sequence:

>2130_bases
ATGCGCTCCTTCTGGGCCACTCTTACACGGTTCGATCGCTCCCAGCTCGCCCCAGTCATGGCAGCCCGCAATGCCCTCGG
CGTCGCCGTCTGCCTCTTCGCGGGCCTTATCCTCCATAACCCCGCGGGCGGCGTAATGGCCGCTACCGGTGCCCTCGACA
CCGCCTTCTCCGATGGCAGCGATCCTTACATCCATCGCGCCCGCCGCATGCTCTCGGCCGCCTTCTTTGTTTCCCTAGCG
GTCTTCGCCGGCCGGCTCTGCGGCCACAATCACGCCCTCACCATCGCGCTCGAATTCATCTGCGCCTTCATCGCGGGCCT
CCTAGTCGCCCTCGGCTCCCCCGCCGATATCGGCACCATCACGCTCGTCACTCTGATCGTTTTCTCCGCCACGCCCGCCG
CCTCCTTCGGCAAGGCACTCACCTCCGGCGCTCTCGCGCTCGCCGGCGGCATCCTCCAGACGCTCTTCTCCCTCGCCCTT
TGGCCCGTCCACCGCTACGCCCCCGAGAGCCGCGCCCTCGCCCTGCTCTATGACGAAATGGCCCGCAACGCCGAGTCCGC
GACTCCCGCCACCGAAGCCCCGCCCGCCACCGACACCATCCTCGCCGCCCGCTCCGCCCTCGCCGCGCTCGACGCCAACC
GCTCCGTCGAAGCCGAGCGCTACCTCGCCCTTTTCGGCCAGGCCGAACGCATCCGCCTGACCCTCCTCACCCTCGGCCGC
CTCCACGTCCGCATCGGCCGCGAACCCGCGACGGGCGCCGAAACCGATACCCTCGCCCGCGCCTTCCACCTCACAGCGCG
CATCCTCAAATCGATCGCCGGATCGCTCGCCGCCGGTGCCAAGGGCAACCCGCACGCCGATTGCATCGCCGAACTCCGCA
ATCTTGCCGAGGTCCTCCGCGAACCCTCCGCCAGCGAATCCCCGGCCGTCGCGGCCATGCGCGGCGACGCGCGCTGGCAG
CTCGATTCGCTTACCGGACAGCTCGCCTCCGCCCTCGAGCTCGCCGCCCACGCCAGCATCACCGGCATGCGTGAGTTCGA
GCTCCATGAAGCCGCCCAGCCCTGGGGCCTTCGCCTGGCCGGCGTCCTCGCCGTTCTCCGCGCCAATCTCACTCCGCAAT
CCGCTGCCTTCCGCCACGCTGTACGCCTCGCCATCTGCGTCGCCATCGCCGACACCCTGACCCGCTCGCTCGGCTGGCAG
CGCAGCTATTGGGCTGCCATGACCGTCGTCATCATACTCAAGCCGGATTTCACTACTACCTTCAGCCGCGGCGTCCTTCG
CCTGGCCGGCACGTTCGCTGGCCTCGCGCTCGCCACTGCTCTCTTCCACGCACTCAGTCCGCTCACAGGCGTGCAGGCCG
TTCTGCTCACCACGTTCATGTTCCTTATGCGCTGGGTCGGGCCGGCGAATTATGGCGTGATGGTCACTGCCATCACGGCG
CTTGTTGTCCTCTTGTTCGCCCTCAGCGGCGTTCCACCCAACCAGGTGATCGCCTGGCGCGCCTTCAACACCGTAGCCGG
CGGCATGATTGCCCTGATCGCCTACCGTCTCTGGCCCACCTGGGAACGCACGCTCGTCCCCGAAGCCCTCGCCCGCATGT
TCGACGCATACCGCGCTTACTTCCAGTCCGTCCGCGATGGCTACGTGGAGGCCGACCCCTTGCGCTCCGAGTTCCTTGCG
CGCCTCGATGAAGCCCGCCAAGCCGGCCGCCTCGCACGCACCAACCTCGAAGCGTCCATCGCCCGTCTGCGCAGTGAGCC
CGGCTTCCCCGCTGAACGCCTCACCGCCCTCAACACCATATTGGCAAATGCCCACCGCCTCATCCACGCGATGATGGCGC
TCGAGGCCGGACTCTTCAACAGTCAACCAGTGCCCGCGCGACCCGCCTTCCGCACCTTCGCCAACAGCGTGGATGCCACG
ATCTATTTCCTTGCCGCCTATCTCCGCGGCACACCCGTGCGCGCCGGCGACCTGCCCGACCTCCGCGAACAACACCGCAC
TCTCCGCCACTCCGGCGATCCCCGCGCCGAGCGCTACCAGCTCGTTAACGTGGAGACCGATCGCGTCACCAACAGTCTCA
ATACCCTATCTCTGGAGATCATCCATTGGGTAAGTAGTAACGAAAATTAA

Upstream 100 bases:

>100_bases
TCACGCAAAGAAACCTTCTCAGCCTCTTTCTTCTTCGCGTTACTCTGCGGCTCTGCGGCTCTGCGAGAAATGCTTTCCTT
CCCGTTATCCTAAGAACTTG

Downstream 100 bases:

>100_bases
CGAATGGGTGTATACTTTGCATCCGGGGAGTAGACCGTTGCGAAGACCTCGTTTGTTTCTCGTTACCGGATTTATCACGT
TGGCCGCCGCTGCCTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MRSFWATLTRFDRSQLAPVMAARNALGVAVCLFAGLILHNPAGGVMAATGALDTAFSDGSDPYIHRARRMLSAAFFVSLA
VFAGRLCGHNHALTIALEFICAFIAGLLVALGSPADIGTITLVTLIVFSATPAASFGKALTSGALALAGGILQTLFSLAL
WPVHRYAPESRALALLYDEMARNAESATPATEAPPATDTILAARSALAALDANRSVEAERYLALFGQAERIRLTLLTLGR
LHVRIGREPATGAETDTLARAFHLTARILKSIAGSLAAGAKGNPHADCIAELRNLAEVLREPSASESPAVAAMRGDARWQ
LDSLTGQLASALELAAHASITGMREFELHEAAQPWGLRLAGVLAVLRANLTPQSAAFRHAVRLAICVAIADTLTRSLGWQ
RSYWAAMTVVIILKPDFTTTFSRGVLRLAGTFAGLALATALFHALSPLTGVQAVLLTTFMFLMRWVGPANYGVMVTAITA
LVVLLFALSGVPPNQVIAWRAFNTVAGGMIALIAYRLWPTWERTLVPEALARMFDAYRAYFQSVRDGYVEADPLRSEFLA
RLDEARQAGRLARTNLEASIARLRSEPGFPAERLTALNTILANAHRLIHAMMALEAGLFNSQPVPARPAFRTFANSVDAT
IYFLAAYLRGTPVRAGDLPDLREQHRTLRHSGDPRAERYQLVNVETDRVTNSLNTLSLEIIHWVSSNEN

Sequences:

>Translated_709_residues
MRSFWATLTRFDRSQLAPVMAARNALGVAVCLFAGLILHNPAGGVMAATGALDTAFSDGSDPYIHRARRMLSAAFFVSLA
VFAGRLCGHNHALTIALEFICAFIAGLLVALGSPADIGTITLVTLIVFSATPAASFGKALTSGALALAGGILQTLFSLAL
WPVHRYAPESRALALLYDEMARNAESATPATEAPPATDTILAARSALAALDANRSVEAERYLALFGQAERIRLTLLTLGR
LHVRIGREPATGAETDTLARAFHLTARILKSIAGSLAAGAKGNPHADCIAELRNLAEVLREPSASESPAVAAMRGDARWQ
LDSLTGQLASALELAAHASITGMREFELHEAAQPWGLRLAGVLAVLRANLTPQSAAFRHAVRLAICVAIADTLTRSLGWQ
RSYWAAMTVVIILKPDFTTTFSRGVLRLAGTFAGLALATALFHALSPLTGVQAVLLTTFMFLMRWVGPANYGVMVTAITA
LVVLLFALSGVPPNQVIAWRAFNTVAGGMIALIAYRLWPTWERTLVPEALARMFDAYRAYFQSVRDGYVEADPLRSEFLA
RLDEARQAGRLARTNLEASIARLRSEPGFPAERLTALNTILANAHRLIHAMMALEAGLFNSQPVPARPAFRTFANSVDAT
IYFLAAYLRGTPVRAGDLPDLREQHRTLRHSGDPRAERYQLVNVETDRVTNSLNTLSLEIIHWVSSNEN
>Mature_709_residues
MRSFWATLTRFDRSQLAPVMAARNALGVAVCLFAGLILHNPAGGVMAATGALDTAFSDGSDPYIHRARRMLSAAFFVSLA
VFAGRLCGHNHALTIALEFICAFIAGLLVALGSPADIGTITLVTLIVFSATPAASFGKALTSGALALAGGILQTLFSLAL
WPVHRYAPESRALALLYDEMARNAESATPATEAPPATDTILAARSALAALDANRSVEAERYLALFGQAERIRLTLLTLGR
LHVRIGREPATGAETDTLARAFHLTARILKSIAGSLAAGAKGNPHADCIAELRNLAEVLREPSASESPAVAAMRGDARWQ
LDSLTGQLASALELAAHASITGMREFELHEAAQPWGLRLAGVLAVLRANLTPQSAAFRHAVRLAICVAIADTLTRSLGWQ
RSYWAAMTVVIILKPDFTTTFSRGVLRLAGTFAGLALATALFHALSPLTGVQAVLLTTFMFLMRWVGPANYGVMVTAITA
LVVLLFALSGVPPNQVIAWRAFNTVAGGMIALIAYRLWPTWERTLVPEALARMFDAYRAYFQSVRDGYVEADPLRSEFLA
RLDEARQAGRLARTNLEASIARLRSEPGFPAERLTALNTILANAHRLIHAMMALEAGLFNSQPVPARPAFRTFANSVDAT
IYFLAAYLRGTPVRAGDLPDLREQHRTLRHSGDPRAERYQLVNVETDRVTNSLNTLSLEIIHWVSSNEN

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=288, Percent_Identity=26.7361111111111, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI87082248, Length=496, Percent_Identity=23.1854838709677, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 76355; Mature: 76355

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFWATLTRFDRSQLAPVMAARNALGVAVCLFAGLILHNPAGGVMAATGALDTAFSDGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCC
DPYIHRARRMLSAAFFVSLAVFAGRLCGHNHALTIALEFICAFIAGLLVALGSPADIGTI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLVTLIVFSATPAASFGKALTSGALALAGGILQTLFSLALWPVHRYAPESRALALLYDEM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARNAESATPATEAPPATDTILAARSALAALDANRSVEAERYLALFGQAERIRLTLLTLGR
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHEEHEEHHHH
LHVRIGREPATGAETDTLARAFHLTARILKSIAGSLAAGAKGNPHADCIAELRNLAEVLR
HHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EPSASESPAVAAMRGDARWQLDSLTGQLASALELAAHASITGMREFELHEAAQPWGLRLA
CCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHH
GVLAVLRANLTPQSAAFRHAVRLAICVAIADTLTRSLGWQRSYWAAMTVVIILKPDFTTT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCHH
FSRGVLRLAGTFAGLALATALFHALSPLTGVQAVLLTTFMFLMRWVGPANYGVMVTAITA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVVLLFALSGVPPNQVIAWRAFNTVAGGMIALIAYRLWPTWERTLVPEALARMFDAYRAY
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FQSVRDGYVEADPLRSEFLARLDEARQAGRLARTNLEASIARLRSEPGFPAERLTALNTI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LANAHRLIHAMMALEAGLFNSQPVPARPAFRTFANSVDATIYFLAAYLRGTPVRAGDLPD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
LREQHRTLRHSGDPRAERYQLVNVETDRVTNSLNTLSLEIIHWVSSNEN
HHHHHHHHHCCCCCCHHHEEEEECCHHHHHCCHHHHHHHEEEECCCCCC
>Mature Secondary Structure
MRSFWATLTRFDRSQLAPVMAARNALGVAVCLFAGLILHNPAGGVMAATGALDTAFSDGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCC
DPYIHRARRMLSAAFFVSLAVFAGRLCGHNHALTIALEFICAFIAGLLVALGSPADIGTI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLVTLIVFSATPAASFGKALTSGALALAGGILQTLFSLALWPVHRYAPESRALALLYDEM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARNAESATPATEAPPATDTILAARSALAALDANRSVEAERYLALFGQAERIRLTLLTLGR
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHEEHEEHHHH
LHVRIGREPATGAETDTLARAFHLTARILKSIAGSLAAGAKGNPHADCIAELRNLAEVLR
HHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EPSASESPAVAAMRGDARWQLDSLTGQLASALELAAHASITGMREFELHEAAQPWGLRLA
CCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHH
GVLAVLRANLTPQSAAFRHAVRLAICVAIADTLTRSLGWQRSYWAAMTVVIILKPDFTTT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCHH
FSRGVLRLAGTFAGLALATALFHALSPLTGVQAVLLTTFMFLMRWVGPANYGVMVTAITA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVVLLFALSGVPPNQVIAWRAFNTVAGGMIALIAYRLWPTWERTLVPEALARMFDAYRAY
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FQSVRDGYVEADPLRSEFLARLDEARQAGRLARTNLEASIARLRSEPGFPAERLTALNTI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LANAHRLIHAMMALEAGLFNSQPVPARPAFRTFANSVDATIYFLAAYLRGTPVRAGDLPD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
LREQHRTLRHSGDPRAERYQLVNVETDRVTNSLNTLSLEIIHWVSSNEN
HHHHHHHHHCCCCCCHHHEEEEECCHHHHHCCHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]