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The map label for this gene is glgC [H]

Identifier: 116623462

GI number: 116623462

Start: 5534022

End: 5535269

Strand: Direct

Name: glgC [H]

Synonym: Acid_4372

Alternate gene names: 116623462

Gene position: 5534022-5535269 (Clockwise)

Preceding gene: 116623458

Following gene: 116623463

Centisome position: 55.53

GC content: 58.97

Gene sequence:

>1248_bases
ATGGAAAATGTATTAGCGATTCTGCTGGCTGGTGGCGCCGGGGAGCGCCTCTATCCCCTTACCAGAGACATTGCCAAACC
CGCAGTTCCCTTTGGCGGGGCCTACCGCATTATTGACTTCACTCTCTCCAACTGTATCAACTCCGACGTTCGTCGTATCC
TCATTTTAACACAGTACAAATCTCTCGAATTAGTACGCCACATCCGCGACGGATGGAACATCCTGTCGCCCGAGATGGGA
GAGTACGTGGAAGTGCTGCCCCCCATGAAACGCGTCCACTCGGATTGGTACCAGGGCACCGCCGACGCCGTTTTTCAAAA
CTTCCAGAGCATCGAGGCCGAATCTCCGGAAGTCACCCTAATCCTCTCCGCGGACCACATATATAAGATGAACTACCGGG
AGATGATCGACTGGCACCGGCGGCATGGCGCCGATATTACCCTCGCTACCCTCCAGGCGCCCCCCGAAGAAGCCCCGCGC
TTCGGCGTACTGGAGATCGATGCCGACTACCGCGTCACCGGCTTCGAGGAAAAGCCCCAGCATGGCAATCCCAAGCGCTC
CCAGTTCGATCCCAACATGGTCAGCGTCTCGATGGGCGTCTACGTCTTCAATACCGAAGTCCTTCTCCGCCTGCTGCACG
AGGATGCGCAGGATCCCAACTCCAGCCATGATTTCGGCAAGGACATAATCCCGCGGCATCTGGAAAGCACGCGCGTAGTG
GCCTACGATTTCCGCGACATCAACGCCAAACAATCGCGATACTGGCGCGATGTCGGAACCCTTGACGCTTTCTACGAGGC
CAATATGGACCTGGTCAGCGTCACCCCGGAATTCAATCTCTACGACCAGCGGTGGCCCATCCGCACCAAGGCCACCCAGC
AGCCGCCCGCCAAATTCGTCTTCGCCCAGGAAGGCCGGCGGATGGGCCTGGCGGTGGATTCCATCGTAAGCGCCGGCTGC
ATCGTTTCCGGCGGACGCGTGCTGCACTGCGTGCTCTCCCCCGGCGTGCGCGTGAACAGCTATTGCGAAGTGGAATATTC
AATTCTGATGCCCAACGTGGAGGTCGGCCGCTATAGCCGCATCCGCCGGGCCATCGTGAGCACGGGAGCCAAAATCCCGG
AGTCGAGTTCGATCGGGTTCGATGTGGAAACCGACCGGGCGAACGGATACCAGGTTACCGAGGGCGGTGTCACCGTGGTC
GGCAATTTCGAAGAAGGCCGCACCAAAGCGCTGCCTTACCTGGCTTAA

Upstream 100 bases:

>100_bases
AGGTTGTTGAGAAATAAAGTCAAGCCCAAATTTAGAACATCCTGTTACAGGACTGCCCTGACTCTGACCATACCCTTTCT
TTTCAGGGGTTTAAGCTGAA

Downstream 100 bases:

>100_bases
TTTTTTAGGGAGCAATACTTTGACGACGATCGTACGCATCTTTGGACGAGAGATTCTGGATTCCCGCGGGAATCCGACTG
TGGAAGCGGATGTCTATCTC

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MENVLAILLAGGAGERLYPLTRDIAKPAVPFGGAYRIIDFTLSNCINSDVRRILILTQYKSLELVRHIRDGWNILSPEMG
EYVEVLPPMKRVHSDWYQGTADAVFQNFQSIEAESPEVTLILSADHIYKMNYREMIDWHRRHGADITLATLQAPPEEAPR
FGVLEIDADYRVTGFEEKPQHGNPKRSQFDPNMVSVSMGVYVFNTEVLLRLLHEDAQDPNSSHDFGKDIIPRHLESTRVV
AYDFRDINAKQSRYWRDVGTLDAFYEANMDLVSVTPEFNLYDQRWPIRTKATQQPPAKFVFAQEGRRMGLAVDSIVSAGC
IVSGGRVLHCVLSPGVRVNSYCEVEYSILMPNVEVGRYSRIRRAIVSTGAKIPESSSIGFDVETDRANGYQVTEGGVTVV
GNFEEGRTKALPYLA

Sequences:

>Translated_415_residues
MENVLAILLAGGAGERLYPLTRDIAKPAVPFGGAYRIIDFTLSNCINSDVRRILILTQYKSLELVRHIRDGWNILSPEMG
EYVEVLPPMKRVHSDWYQGTADAVFQNFQSIEAESPEVTLILSADHIYKMNYREMIDWHRRHGADITLATLQAPPEEAPR
FGVLEIDADYRVTGFEEKPQHGNPKRSQFDPNMVSVSMGVYVFNTEVLLRLLHEDAQDPNSSHDFGKDIIPRHLESTRVV
AYDFRDINAKQSRYWRDVGTLDAFYEANMDLVSVTPEFNLYDQRWPIRTKATQQPPAKFVFAQEGRRMGLAVDSIVSAGC
IVSGGRVLHCVLSPGVRVNSYCEVEYSILMPNVEVGRYSRIRRAIVSTGAKIPESSSIGFDVETDRANGYQVTEGGVTVV
GNFEEGRTKALPYLA
>Mature_415_residues
MENVLAILLAGGAGERLYPLTRDIAKPAVPFGGAYRIIDFTLSNCINSDVRRILILTQYKSLELVRHIRDGWNILSPEMG
EYVEVLPPMKRVHSDWYQGTADAVFQNFQSIEAESPEVTLILSADHIYKMNYREMIDWHRRHGADITLATLQAPPEEAPR
FGVLEIDADYRVTGFEEKPQHGNPKRSQFDPNMVSVSMGVYVFNTEVLLRLLHEDAQDPNSSHDFGKDIIPRHLESTRVV
AYDFRDINAKQSRYWRDVGTLDAFYEANMDLVSVTPEFNLYDQRWPIRTKATQQPPAKFVFAQEGRRMGLAVDSIVSAGC
IVSGGRVLHCVLSPGVRVNSYCEVEYSILMPNVEVGRYSRIRRAIVSTGAKIPESSSIGFDVETDRANGYQVTEGGVTVV
GNFEEGRTKALPYLA

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=401, Percent_Identity=46.8827930174564, Blast_Score=362, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI133931050, Length=372, Percent_Identity=22.5806451612903, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355443, Length=368, Percent_Identity=23.6413043478261, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24644084, Length=368, Percent_Identity=23.6413043478261, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 46739; Mature: 46739

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVLAILLAGGAGERLYPLTRDIAKPAVPFGGAYRIIDFTLSNCINSDVRRILILTQYK
CCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHEEEEEECHH
SLELVRHIRDGWNILSPEMGEYVEVLPPMKRVHSDWYQGTADAVFQNFQSIEAESPEVTL
HHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEE
ILSADHIYKMNYREMIDWHRRHGADITLATLQAPPEEAPRFGVLEIDADYRVTGFEEKPQ
EEECCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCC
HGNPKRSQFDPNMVSVSMGVYVFNTEVLLRLLHEDAQDPNSSHDFGKDIIPRHLESTRVV
CCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEE
AYDFRDINAKQSRYWRDVGTLDAFYEANMDLVSVTPEFNLYDQRWPIRTKATQQPPAKFV
EEECCCCCCHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
FAQEGRRMGLAVDSIVSAGCIVSGGRVLHCVLSPGVRVNSYCEVEYSILMPNVEVGRYSR
EECCCCCCCEEHHHHHHCCCEECCCEEEEEEECCCCEECCEEEEEEEEECCCCCCCHHHH
IRRAIVSTGAKIPESSSIGFDVETDRANGYQVTEGGVTVVGNFEEGRTKALPYLA
HHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MENVLAILLAGGAGERLYPLTRDIAKPAVPFGGAYRIIDFTLSNCINSDVRRILILTQYK
CCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHEEEEEECHH
SLELVRHIRDGWNILSPEMGEYVEVLPPMKRVHSDWYQGTADAVFQNFQSIEAESPEVTL
HHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEE
ILSADHIYKMNYREMIDWHRRHGADITLATLQAPPEEAPRFGVLEIDADYRVTGFEEKPQ
EEECCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCC
HGNPKRSQFDPNMVSVSMGVYVFNTEVLLRLLHEDAQDPNSSHDFGKDIIPRHLESTRVV
CCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEE
AYDFRDINAKQSRYWRDVGTLDAFYEANMDLVSVTPEFNLYDQRWPIRTKATQQPPAKFV
EEECCCCCCHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
FAQEGRRMGLAVDSIVSAGCIVSGGRVLHCVLSPGVRVNSYCEVEYSILMPNVEVGRYSR
EECCCCCCCEEHHHHHHCCCEECCCEEEEEEECCCCEECCEEEEEEEEECCCCCCCHHHH
IRRAIVSTGAKIPESSSIGFDVETDRANGYQVTEGGVTVVGNFEEGRTKALPYLA
HHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA