| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623438
Identifier: 116623438
GI number: 116623438
Start: 5509742
End: 5510239
Strand: Direct
Name: 116623438
Synonym: Acid_4347
Alternate gene names: NA
Gene position: 5509742-5510239 (Clockwise)
Preceding gene: 116623437
Following gene: 116623441
Centisome position: 55.29
GC content: 65.66
Gene sequence:
>498_bases ATGGGCGGCCTATTCTCAAAGAAACTGAAAAGGTGTAGGAGGCGCCCTTCTCTTTGGGTAGTCATTCTGGCGGTGTTATT GGCGGCGTGCGGGGGACCGCCTAAGAGGGTGGAGGCGCCGGCGCCCGATCCCACGCTTGACGCATCGTATGGGCGGGCGG TAGCGGAGTTGGCGGCGGCGGGACGGGAGGCAAAGGCGTTGATCTCGGCGGGGAAGAACGACGCGGCGGCGGCGGTGATC ACGCGCGGTCAGCCGCTGATCGCGACTGTGCTGGCGGCACCGCACCCGACGCTGGCGGCCATGGAAGCGGCATCGGACCT GGACGAGCTCTACGGGCAAATGCTGCTGGCGAACAAGAACTACGGGTGGGCGCGCATGCTCTTTCAGAAGAACCGGTCGC GGTGGATGCATTGGACTCCGCAGACCGACGACACGACGCGACGACGCAACGAAGCGGACGCGGCGATTGCGGAGTGCGAC CGCGCGATCGCGAAATAG
Upstream 100 bases:
>100_bases GCAAAGCTCGCTCTCGTTTGGTCGCGGCTCTGATGCGAATCTTCGCGGGCTGCGAGCAAACTAGAGCAGTGTAATACTTA GGCGGCAAGACGCAACCAAA
Downstream 100 bases:
>100_bases CTAGTTCGCGGTAGGCGCCTTCAAGATGTGATCGACCACCAGCACTTCGAGCGGCGCTTTTCGGTTCTCCAGTCTCAAGC CGATGGACTCGAGCGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGGLFSKKLKRCRRRPSLWVVILAVLLAACGGPPKRVEAPAPDPTLDASYGRAVAELAAAGREAKALISAGKNDAAAAVI TRGQPLIATVLAAPHPTLAAMEAASDLDELYGQMLLANKNYGWARMLFQKNRSRWMHWTPQTDDTTRRRNEADAAIAECD RAIAK
Sequences:
>Translated_165_residues MGGLFSKKLKRCRRRPSLWVVILAVLLAACGGPPKRVEAPAPDPTLDASYGRAVAELAAAGREAKALISAGKNDAAAAVI TRGQPLIATVLAAPHPTLAAMEAASDLDELYGQMLLANKNYGWARMLFQKNRSRWMHWTPQTDDTTRRRNEADAAIAECD RAIAK >Mature_164_residues GGLFSKKLKRCRRRPSLWVVILAVLLAACGGPPKRVEAPAPDPTLDASYGRAVAELAAAGREAKALISAGKNDAAAAVIT RGQPLIATVLAAPHPTLAAMEAASDLDELYGQMLLANKNYGWARMLFQKNRSRWMHWTPQTDDTTRRRNEADAAIAECDR AIAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17821; Mature: 17690
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLFSKKLKRCRRRPSLWVVILAVLLAACGGPPKRVEAPAPDPTLDASYGRAVAELAAA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC GREAKALISAGKNDAAAAVITRGQPLIATVLAAPHPTLAAMEAASDLDELYGQMLLANKN CHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC YGWARMLFQKNRSRWMHWTPQTDDTTRRRNEADAAIAECDRAIAK CCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGLFSKKLKRCRRRPSLWVVILAVLLAACGGPPKRVEAPAPDPTLDASYGRAVAELAAA CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC GREAKALISAGKNDAAAAVITRGQPLIATVLAAPHPTLAAMEAASDLDELYGQMLLANKN CHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC YGWARMLFQKNRSRWMHWTPQTDDTTRRRNEADAAIAECDRAIAK CCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA