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The map label for this gene is ag45 [H]

Identifier: 116623431

GI number: 116623431

Start: 5497102

End: 5498304

Strand: Direct

Name: ag45 [H]

Synonym: Acid_4340

Alternate gene names: 116623431

Gene position: 5497102-5498304 (Clockwise)

Preceding gene: 116623430

Following gene: 116623432

Centisome position: 55.16

GC content: 65.59

Gene sequence:

>1203_bases
GTGCTCGCCGCCGTCCTCATTTTTGCCGGCACCTACCTGGTGCTCGCCATCGGACGCCTGCCTGGATTGCGGCTCGACCG
CACCGGCGCGGCGATCGTGGGCGCGAGCCTGATGCTGGCCTTCAACGTCCTCACCGTGGAAGAGGCCTACGCGGCGATCA
ACTATGACACGATCATCCTGCTGTTCGGCATGATGATCGTGGTGGCCAACTTGCGCCTCTCGGGCTTTTTCGCGCTGGTC
AGCGCGTGGGTGGTGGAGCATGCGCACGCGCCATTGGTGCTGCTCTCCGGCATCGTCCTGGTGGCCGGGGTCTTCTCCGC
CTTCTTCGTCAACGACACCATGTGCCTGGTGCTCACGCCACTGGTGCTCGATATCACGCGGAGGCTGGGACGCAGGCCCG
TGCCGTACCTGCTCGCGGTCGCCATGGCATCCAACATCGGCAGCGTGGCCACCATCACAGGGAACCCGCAGAACATGATG
ATCGGGTCCTTCTCCCAAATCCCGTACCGCACCTTCGCGGCGGCGCTGGCGCCGGTCGCGGCGGCCGGACTGGCGATGAC
CATCGCGGTCATCGCCCTGCTCTATCGCGCCGAGTTCCGCGGCGCTTCGCGCCTGGTGGTGGAACATCCAACGGTTCGCG
TCAACCGCGTGCTGCTCGGCAAATCGCTCGCCGTCTCGGCTGCGATGATCGTGCTTTTCTTCGGCGGATGGCCGGTGCCG
AAGGTCGCTGTAGTCGCCGGCGCCCTGCTGCTCATCACACGGCGCATCAAGCCGGAGAGAGTCTACCGCGAGATCGATTG
GAGCCTGCTGGTGATGTTCATCGGCCTCTTCATCGTGATTGCCGGCATCGAAAAGACGCCGCTGCCGGGCGATTTGTTCG
CCGCGGCCGGCCGCTTCCATCTGGAGCGCGTGTGGCCGATGAGCATCTTCGCCGCGCTGCTCTCCAACCTGTTCAGCAAC
GTCCCCGCCGTCCTCGTCTTCAAGACCTTCGTCCCGCACCTCGCCGATCCGGTGCGGGCGTGGCTCACGCTCGCGATGTC
CTCGACACTCGCCGGGAATCTGACGCTGCTCGGTTCGGTAGCCAACCTGATCGTCGCCCAACGCGCTCGCGGCCAGGCCG
AGATCACCTTCCGGGAGCACGCGCGCACCGGCATTCCGCTCACCATTGTGACCATTGCCGCCGGCGTCTGGATGCTGAGC
TAA

Upstream 100 bases:

>100_bases
ACAAGGGAACCATCGAAAGCCCCACCGCCATGAAAGGCACCGCCGTCTACTCGGGCGTAGACGACCACGTAACCTGGTCC
GCGTCGAAGAAGTAGCCTGA

Downstream 100 bases:

>100_bases
GGCGGGCCCGTGTGTTTGCTCGCCGCCTGTGTGGGGCAGGCAATCCTGCCTGCAGCCGGCTTTCAGCCGGCTTGCCCCGC
GCCAACGCGGCCGTCCCTGT

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLAAVLIFAGTYLVLAIGRLPGLRLDRTGAAIVGASLMLAFNVLTVEEAYAAINYDTIILLFGMMIVVANLRLSGFFALV
SAWVVEHAHAPLVLLSGIVLVAGVFSAFFVNDTMCLVLTPLVLDITRRLGRRPVPYLLAVAMASNIGSVATITGNPQNMM
IGSFSQIPYRTFAAALAPVAAAGLAMTIAVIALLYRAEFRGASRLVVEHPTVRVNRVLLGKSLAVSAAMIVLFFGGWPVP
KVAVVAGALLLITRRIKPERVYREIDWSLLVMFIGLFIVIAGIEKTPLPGDLFAAAGRFHLERVWPMSIFAALLSNLFSN
VPAVLVFKTFVPHLADPVRAWLTLAMSSTLAGNLTLLGSVANLIVAQRARGQAEITFREHARTGIPLTIVTIAAGVWMLS

Sequences:

>Translated_400_residues
MLAAVLIFAGTYLVLAIGRLPGLRLDRTGAAIVGASLMLAFNVLTVEEAYAAINYDTIILLFGMMIVVANLRLSGFFALV
SAWVVEHAHAPLVLLSGIVLVAGVFSAFFVNDTMCLVLTPLVLDITRRLGRRPVPYLLAVAMASNIGSVATITGNPQNMM
IGSFSQIPYRTFAAALAPVAAAGLAMTIAVIALLYRAEFRGASRLVVEHPTVRVNRVLLGKSLAVSAAMIVLFFGGWPVP
KVAVVAGALLLITRRIKPERVYREIDWSLLVMFIGLFIVIAGIEKTPLPGDLFAAAGRFHLERVWPMSIFAALLSNLFSN
VPAVLVFKTFVPHLADPVRAWLTLAMSSTLAGNLTLLGSVANLIVAQRARGQAEITFREHARTGIPLTIVTIAAGVWMLS
>Mature_400_residues
MLAAVLIFAGTYLVLAIGRLPGLRLDRTGAAIVGASLMLAFNVLTVEEAYAAINYDTIILLFGMMIVVANLRLSGFFALV
SAWVVEHAHAPLVLLSGIVLVAGVFSAFFVNDTMCLVLTPLVLDITRRLGRRPVPYLLAVAMASNIGSVATITGNPQNMM
IGSFSQIPYRTFAAALAPVAAAGLAMTIAVIALLYRAEFRGASRLVVEHPTVRVNRVLLGKSLAVSAAMIVLFFGGWPVP
KVAVVAGALLLITRRIKPERVYREIDWSLLVMFIGLFIVIAGIEKTPLPGDLFAAAGRFHLERVWPMSIFAALLSNLFSN
VPAVLVFKTFVPHLADPVRAWLTLAMSSTLAGNLTLLGSVANLIVAQRARGQAEITFREHARTGIPLTIVTIAAGVWMLS

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Escherichia coli, GI1787039, Length=366, Percent_Identity=27.3224043715847, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI87082277, Length=357, Percent_Identity=23.249299719888, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24581759, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574683, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574681, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574685, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574678, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19920704, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 42868; Mature: 42868

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAVLIFAGTYLVLAIGRLPGLRLDRTGAAIVGASLMLAFNVLTVEEAYAAINYDTIIL
CHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LFGMMIVVANLRLSGFFALVSAWVVEHAHAPLVLLSGIVLVAGVFSAFFVNDTMCLVLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVLDITRRLGRRPVPYLLAVAMASNIGSVATITGNPQNMMIGSFSQIPYRTFAAALAPVA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHH
AAGLAMTIAVIALLYRAEFRGASRLVVEHPTVRVNRVLLGKSLAVSAAMIVLFFGGWPVP
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCH
KVAVVAGALLLITRRIKPERVYREIDWSLLVMFIGLFIVIAGIEKTPLPGDLFAAAGRFH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHH
LERVWPMSIFAALLSNLFSNVPAVLVFKTFVPHLADPVRAWLTLAMSSTLAGNLTLLGSV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ANLIVAQRARGQAEITFREHARTGIPLTIVTIAAGVWMLS
HHHHHHHHCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLAAVLIFAGTYLVLAIGRLPGLRLDRTGAAIVGASLMLAFNVLTVEEAYAAINYDTIIL
CHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LFGMMIVVANLRLSGFFALVSAWVVEHAHAPLVLLSGIVLVAGVFSAFFVNDTMCLVLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVLDITRRLGRRPVPYLLAVAMASNIGSVATITGNPQNMMIGSFSQIPYRTFAAALAPVA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHH
AAGLAMTIAVIALLYRAEFRGASRLVVEHPTVRVNRVLLGKSLAVSAAMIVLFFGGWPVP
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCH
KVAVVAGALLLITRRIKPERVYREIDWSLLVMFIGLFIVIAGIEKTPLPGDLFAAAGRFH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHH
LERVWPMSIFAALLSNLFSNVPAVLVFKTFVPHLADPVRAWLTLAMSSTLAGNLTLLGSV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ANLIVAQRARGQAEITFREHARTGIPLTIVTIAAGVWMLS
HHHHHHHHCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]