| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623424
Identifier: 116623424
GI number: 116623424
Start: 5491409
End: 5491924
Strand: Direct
Name: 116623424
Synonym: Acid_4333
Alternate gene names: NA
Gene position: 5491409-5491924 (Clockwise)
Preceding gene: 116623420
Following gene: 116623426
Centisome position: 55.1
GC content: 57.75
Gene sequence:
>516_bases ATGGCTCAGGATGACTCAATTGAACGGCTCGCGCGCCAGATCGAGGCGGTGCGGAAGGCTGAGCGCTTCTACTTGAACGC TCATGAGGTCGCGAGTCTGCGCCGCCAGGGTGCTTGCGAGCTGCATCGGATGTGTACGGAATTTGTCGGATCGGTGAACA GCACTCTGACGGATACAGCCCTCGATCTCTCGCCGGCGACCTTTGCTCCGGCGACGTTCCGCGAGACCGGGATCAATCTG TTCCAAATCGGATCGCAGGGCCGCGAAATGCAAATCGCATTTGAGGCGGCTCCCGAACCCTTCTCTACCGAGAAGTTCCT GGTTCCTTACATCATGGAAGGCGAAATTCGGACCTACAACCAGAGGATGCTCGAGCGGTTTGAGATTCGGAGCCAGCTGC TGTTCTTCTGTGTGTCGGAGACAACCCCTGGGTGGCGCTTCTTCGATTGGCGAACCCGGCACACCGGACCGGTTGATCGT AAGTTGCTCGTGAGCCTGATGGAATCGCTCTTCTAA
Upstream 100 bases:
>100_bases CAAAGCTACCCCGCGAACTGTCTGCGTTCAACCTCGGTCCGGTGTGAAGGCGTGTTCATTAGCACTTCGCAAAGGGCTAC AATGAGCATTCCTCCAGACC
Downstream 100 bases:
>100_bases CCCGCCACGATCCTTTCCAATATGTCGGGGATCTCGAAGATCGCGCGATTGTTGTAGCGCTCGGCCGCCTCGCGGTAGCG CTCGTACGCCGCGGGTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAQDDSIERLARQIEAVRKAERFYLNAHEVASLRRQGACELHRMCTEFVGSVNSTLTDTALDLSPATFAPATFRETGINL FQIGSQGREMQIAFEAAPEPFSTEKFLVPYIMEGEIRTYNQRMLERFEIRSQLLFFCVSETTPGWRFFDWRTRHTGPVDR KLLVSLMESLF
Sequences:
>Translated_171_residues MAQDDSIERLARQIEAVRKAERFYLNAHEVASLRRQGACELHRMCTEFVGSVNSTLTDTALDLSPATFAPATFRETGINL FQIGSQGREMQIAFEAAPEPFSTEKFLVPYIMEGEIRTYNQRMLERFEIRSQLLFFCVSETTPGWRFFDWRTRHTGPVDR KLLVSLMESLF >Mature_170_residues AQDDSIERLARQIEAVRKAERFYLNAHEVASLRRQGACELHRMCTEFVGSVNSTLTDTALDLSPATFAPATFRETGINLF QIGSQGREMQIAFEAAPEPFSTEKFLVPYIMEGEIRTYNQRMLERFEIRSQLLFFCVSETTPGWRFFDWRTRHTGPVDRK LLVSLMESLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19768; Mature: 19637
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDDSIERLARQIEAVRKAERFYLNAHEVASLRRQGACELHRMCTEFVGSVNSTLTDTA CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH LDLSPATFAPATFRETGINLFQIGSQGREMQIAFEAAPEPFSTEKFLVPYIMEGEIRTYN HCCCCCCCCCCHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCHHHHH QRMLERFEIRSQLLFFCVSETTPGWRFFDWRTRHTGPVDRKLLVSLMESLF HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure AQDDSIERLARQIEAVRKAERFYLNAHEVASLRRQGACELHRMCTEFVGSVNSTLTDTA CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH LDLSPATFAPATFRETGINLFQIGSQGREMQIAFEAAPEPFSTEKFLVPYIMEGEIRTYN HCCCCCCCCCCHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCHHHHH QRMLERFEIRSQLLFFCVSETTPGWRFFDWRTRHTGPVDRKLLVSLMESLF HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA