| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623423
Identifier: 116623423
GI number: 116623423
Start: 5489986
End: 5491290
Strand: Reverse
Name: 116623423
Synonym: Acid_4332
Alternate gene names: NA
Gene position: 5491290-5489986 (Counterclockwise)
Preceding gene: 116623425
Following gene: 116623422
Centisome position: 55.1
GC content: 61.69
Gene sequence:
>1305_bases ATGATGCTGCGAATTGTTCTAGGTCTCCTCGCCATCGCGGTTGCGTTTGCGTTCGAACAGACTCCCGCTCCGGTCAAAGC CGGCGATCTCGCGCCCAACCTCGTATGGACGCGAATCCTGGCGGGCGGCGAGCCGGGGAGCTTTTTCGGGCGCGTTACCG TGATCGCGTTCTTTCCGGCAGTGTCTCCGAACGAGTCGCTGGTTTCGAAACGGAACGAGCTGGTAGCCAAGTTCGCCGGC CAACCGGTTCAGTTCGTATGGATCGCCGCGGAGTATCAGCCGCCGCTCGATCCCTGGCTGGAAAAACACCCGGTGAGCGG GTGCCTGCTGCTCGATCCGCTCGGCGCCACCGCTCAAGCCTACGGAGTGGAATTCGGGGGCGCGATCGTCAACTCGGAGG GCCGCATCGCCGGCTTCACGTTCGTCGAGCCCGGCGAAGAGCAAATCAAAGCCGTCCAGGAAGGCCGCTCGATTGCGATT AAGGGCGATGCCGACGATTCCCAACTGGATGCCATCCTGGCCGGCCGCGCCGTCCGCCTGGATTCCGAACCGCATCGAAT GCGTATGGCCGTCCCGGAAGGCAAACCGGACATTCCGCCGTCTCTCGAAGTTGGGATTTCTCTCTCGAAGACGAACGGGA CCGAGGAGAACCAGGGGCCCGATTGGTGGGTGCAGCGCGGCTTCGATCTTAAGACTGTGATCGCCAAGGTTTATGAGAGA GACGCCAGCCGCATCGTGATGCCGCAAGCGCTCCAAAACGAGGAGCGATATGACTTTGTCCTGGTCCCACACCACAACAT GGACCCGCCGGCGATGCGGCACCTGCTGCAGGAGGCCATCGAACGCCACTTCCACGTGTCGGCGGCGATCGAAAGCAGGC CGGCGGACGTGTACGTGATGACCGCACTAGAGGGAAAGACTCCGCCCGCCAAAACCGGCGATGACAGGATGGGCGGCGGC TCGATTGGTTGGTCCTCGCAGGAATTCGCCGTGGACGGGCCGCGCGATGGCGGGCAGCCGACGCCCGAGATGATTCGCGA GAGGTTGGCCACTCTCAAGCTTGCAGCGATGGCCAATATCTCCGCCTTTAATACCGATTTGGCCGACTTTCGCCGCGCGC TTGAAGATGGATTGGGGCGACCCATCATCGACGAGTCCAACCTCGACGGAACCTATGATCTGGTGGTTCACGGTAATGCC CGCAGCACCGAGGAATTTCTCGGGATGCTGCGCGATCAATTGGGCATCGTCCTGACACCCGAACGTCGAAACATCGAGAT GTTGGTGATCCGACTGCTGCCGTGA
Upstream 100 bases:
>100_bases TTGTAGCCCTTTGCGAAGTGCTAATGAACACGCCTTCACACCGGACCGAGGTTGAACGCAGACAGTTCGCGGGGTAGCTT TGAGGAGGGATCGCACCTGA
Downstream 100 bases:
>100_bases AGGTTGAAGGATCTTGATTGATAGTTACCAAAATGGTAACATAGGTCTTGAGGGTTATTAGCAAGGGAGCCATCACCGAA TTCTGTCGAATTCATCCGGA
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MMLRIVLGLLAIAVAFAFEQTPAPVKAGDLAPNLVWTRILAGGEPGSFFGRVTVIAFFPAVSPNESLVSKRNELVAKFAG QPVQFVWIAAEYQPPLDPWLEKHPVSGCLLLDPLGATAQAYGVEFGGAIVNSEGRIAGFTFVEPGEEQIKAVQEGRSIAI KGDADDSQLDAILAGRAVRLDSEPHRMRMAVPEGKPDIPPSLEVGISLSKTNGTEENQGPDWWVQRGFDLKTVIAKVYER DASRIVMPQALQNEERYDFVLVPHHNMDPPAMRHLLQEAIERHFHVSAAIESRPADVYVMTALEGKTPPAKTGDDRMGGG SIGWSSQEFAVDGPRDGGQPTPEMIRERLATLKLAAMANISAFNTDLADFRRALEDGLGRPIIDESNLDGTYDLVVHGNA RSTEEFLGMLRDQLGIVLTPERRNIEMLVIRLLP
Sequences:
>Translated_434_residues MMLRIVLGLLAIAVAFAFEQTPAPVKAGDLAPNLVWTRILAGGEPGSFFGRVTVIAFFPAVSPNESLVSKRNELVAKFAG QPVQFVWIAAEYQPPLDPWLEKHPVSGCLLLDPLGATAQAYGVEFGGAIVNSEGRIAGFTFVEPGEEQIKAVQEGRSIAI KGDADDSQLDAILAGRAVRLDSEPHRMRMAVPEGKPDIPPSLEVGISLSKTNGTEENQGPDWWVQRGFDLKTVIAKVYER DASRIVMPQALQNEERYDFVLVPHHNMDPPAMRHLLQEAIERHFHVSAAIESRPADVYVMTALEGKTPPAKTGDDRMGGG SIGWSSQEFAVDGPRDGGQPTPEMIRERLATLKLAAMANISAFNTDLADFRRALEDGLGRPIIDESNLDGTYDLVVHGNA RSTEEFLGMLRDQLGIVLTPERRNIEMLVIRLLP >Mature_434_residues MMLRIVLGLLAIAVAFAFEQTPAPVKAGDLAPNLVWTRILAGGEPGSFFGRVTVIAFFPAVSPNESLVSKRNELVAKFAG QPVQFVWIAAEYQPPLDPWLEKHPVSGCLLLDPLGATAQAYGVEFGGAIVNSEGRIAGFTFVEPGEEQIKAVQEGRSIAI KGDADDSQLDAILAGRAVRLDSEPHRMRMAVPEGKPDIPPSLEVGISLSKTNGTEENQGPDWWVQRGFDLKTVIAKVYER DASRIVMPQALQNEERYDFVLVPHHNMDPPAMRHLLQEAIERHFHVSAAIESRPADVYVMTALEGKTPPAKTGDDRMGGG SIGWSSQEFAVDGPRDGGQPTPEMIRERLATLKLAAMANISAFNTDLADFRRALEDGLGRPIIDESNLDGTYDLVVHGNA RSTEEFLGMLRDQLGIVLTPERRNIEMLVIRLLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47414; Mature: 47414
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRIVLGLLAIAVAFAFEQTPAPVKAGDLAPNLVWTRILAGGEPGSFFGRVTVIAFFPA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEEEEEECC VSPNESLVSKRNELVAKFAGQPVQFVWIAAEYQPPLDPWLEKHPVSGCLLLDPLGATAQA CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCHHH YGVEFGGAIVNSEGRIAGFTFVEPGEEQIKAVQEGRSIAIKGDADDSQLDAILAGRAVRL HCEEECCEEECCCCCEEEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCEEEE DSEPHRMRMAVPEGKPDIPPSLEVGISLSKTNGTEENQGPDWWVQRGFDLKTVIAKVYER CCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHC DASRIVMPQALQNEERYDFVLVPHHNMDPPAMRHLLQEAIERHFHVSAAIESRPADVYVM CCCEEECCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEHHCCCCCCEEEE TALEGKTPPAKTGDDRMGGGSIGWSSQEFAVDGPRDGGQPTPEMIRERLATLKLAAMANI EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC SAFNTDLADFRRALEDGLGRPIIDESNLDGTYDLVVHGNARSTEEFLGMLRDQLGIVLTP HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEECC ERRNIEMLVIRLLP CCCCEEEEEEEECC >Mature Secondary Structure MMLRIVLGLLAIAVAFAFEQTPAPVKAGDLAPNLVWTRILAGGEPGSFFGRVTVIAFFPA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHEEEEEEEECC VSPNESLVSKRNELVAKFAGQPVQFVWIAAEYQPPLDPWLEKHPVSGCLLLDPLGATAQA CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCCCHHH YGVEFGGAIVNSEGRIAGFTFVEPGEEQIKAVQEGRSIAIKGDADDSQLDAILAGRAVRL HCEEECCEEECCCCCEEEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCEEEE DSEPHRMRMAVPEGKPDIPPSLEVGISLSKTNGTEENQGPDWWVQRGFDLKTVIAKVYER CCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHC DASRIVMPQALQNEERYDFVLVPHHNMDPPAMRHLLQEAIERHFHVSAAIESRPADVYVM CCCEEECCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEHHCCCCCCEEEE TALEGKTPPAKTGDDRMGGGSIGWSSQEFAVDGPRDGGQPTPEMIRERLATLKLAAMANI EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC SAFNTDLADFRRALEDGLGRPIIDESNLDGTYDLVVHGNARSTEEFLGMLRDQLGIVLTP HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEECC ERRNIEMLVIRLLP CCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA