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The map label for this gene is 116623421

Identifier: 116623421

GI number: 116623421

Start: 5489250

End: 5489654

Strand: Reverse

Name: 116623421

Synonym: Acid_4330

Alternate gene names: NA

Gene position: 5489654-5489250 (Counterclockwise)

Preceding gene: 116623422

Following gene: 116623419

Centisome position: 55.09

GC content: 55.8

Gene sequence:

>405_bases
ATGAGCGCCACACTCCTCGACGCGAGCAAGTACCGGGAACTTTTGAACGACACTCTACCCCTGGTCATCCACGATGAGGC
TGAATACCAAAGGCTGCTTCACGGCGCCGGGAAGCTGATGGAGAAAGTGGACGACGAGACAACTGAGGAAGAGGGCCGCC
TGCTCGAAATGCTCAGCATGCTGATCGAAGAATACGAAGACCGCGTACATCCGCTCCCGGCCACCTCTCCTCACAAAATG
CTGCAACATCTGCTGCAGGAAAAGGGTTTACGGCCAAGCGGCCTTTGGGACTTGATACCGAAGAGCCGGGTGTCCGAAAT
CCTGAGCGGAAGACGAAGTATCAGCAAGGCGCAGGCGAAGAAACTCGCCGCACGATTTAAGGTTCCCGTCGAGTTGTTTC
TGTGA

Upstream 100 bases:

>100_bases
ACAAATACCGACTTGTCGCGGTGATCAAATACCGCTGGAAAGTGATCTATTTGCGCTATATCTTGAGCCACGCGGAATAC
ACAAAGGAGAGATGGAAATC

Downstream 100 bases:

>100_bases
AACGCTGCACCGCGGACGGATCGCGGCGAGCCTACTTTGCCTGAAGGCCTTCCACGTACTTCACCAGGGCCATGACGCGC
ATTTCGCCGAGGCCTTTTTG

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator; HTH-Type Transcriptional Regulator YgjM- Like; HTH Transcriptional Regulator

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSATLLDASKYRELLNDTLPLVIHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSMLIEEYEDRVHPLPATSPHKM
LQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISKAQAKKLAARFKVPVELFL

Sequences:

>Translated_134_residues
MSATLLDASKYRELLNDTLPLVIHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSMLIEEYEDRVHPLPATSPHKM
LQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISKAQAKKLAARFKVPVELFL
>Mature_133_residues
SATLLDASKYRELLNDTLPLVIHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSMLIEEYEDRVHPLPATSPHKML
QHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISKAQAKKLAARFKVPVELFL

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15301; Mature: 15170

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATLLDASKYRELLNDTLPLVIHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSM
CCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LIEEYEDRVHPLPATSPHKMLQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISKAQAK
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
KLAARFKVPVELFL
HHHHHHCCCHHHCC
>Mature Secondary Structure 
SATLLDASKYRELLNDTLPLVIHDEAEYQRLLHGAGKLMEKVDDETTEEEGRLLEMLSM
CCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LIEEYEDRVHPLPATSPHKMLQHLLQEKGLRPSGLWDLIPKSRVSEILSGRRSISKAQAK
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
KLAARFKVPVELFL
HHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA