| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623407
Identifier: 116623407
GI number: 116623407
Start: 5465947
End: 5467932
Strand: Direct
Name: 116623407
Synonym: Acid_4316
Alternate gene names: NA
Gene position: 5465947-5467932 (Clockwise)
Preceding gene: 116623406
Following gene: 116623408
Centisome position: 54.85
GC content: 61.83
Gene sequence:
>1986_bases ATGAGGCCGATCCTCGCCATTCTCCTACTGGCCGTCCCGGTGTGCGCTCAGCGCGCGCAGTTGCCCCGCAAGGGCCGCCA GCCGGACACTGCCGAACCGGTGCCCGTCGAACCCATACGGAAACTGCCGAGGCGTGTTGTGATCACCGCCGCGCCTCCCG CAACGCCGCCGGCCGCGCGGCCCATGCAATCGCCACCCCCTCTCTCCGAGGACCGCGTGCGCTCGCTCTTGCGCGGCAAC ATCACGCCGCTCGAAACACCACCGCCTTCCGCGGAACTCGCGCGCACTCTGCCCCGGATTCCTCCTCCCCTCGCCGGGGC GGCGATCCTGCCGGCGACAGTGGTGGCCGAAACAGTCCCCTCGCGCTGGAAGATCTTCCCTGCCCCGCCGTGGCGGCGTT ATGACGACAAGCGCCTCGACGCCATCTACGCCACTTCGCGTTACTGGGACCCGTTCAATCGCAACACCATCAAGGGTGAC TACCCGATCTACGGCCGCAAGGTCTTCTTCTCCTTCACCGGCACCACCGACACCACCTACGAGCGCCGCCGCGTCCCCGT CCCTTCAGGCGCCAGCGCGAACGATCCCGGCGAATTCCAATTCTTCGGCGACGGACAGCAATCCATCGTGCAGCAGAATT TCCGCTTCAGCTTCGATCTCTTCCACGGCGCCGCCGGCTTCAAGCCCGTCGATTGGGAGCTCAAGGTCACGCCCGAATTC AATATGAACTACGTGAACTCCCGCGAAAACGGCCTGATCGATATCAACGTGCTCAACGGTATCGACCGCACCGATTCGAA CGTCGGCTTTCAGGAGCTCTACTTCGAGAAACGCATCCGGACCGACAAATCGTATTTCGATTTCACGTCCGTCCGCGCCG GAATCCAGCGCTTCACCAGCGATTTCCGCGGCTTCGTATTCAGCGACGAGCAACCCGGCGTCCGCATCTTCGGCACGCTT CACAACAACATCCTCCAGTACAACCTAGCCTACTTCTACATGCTCGAGAAGGATACCAATAGCGGCCTCAATCGGTGGCG CCTCCGCCAGCAACAGGTCGCCGTGGCCAACGTCTATTGGAGCGATTTCCTCACTAAGGGTTACACGCTGAATTTCAGCG CGCTTTACAATCACGATCAACCTTCGTTCCTGATCGATAAGAACGGCTTCCTGGTGCGCCCCGCACCGGTTGGTTTCCCG ATCCCGCACCAGATCGCCGCGGGCTACGCCGGCATCTCCGGCGACGGTCACCTCGGGCGCTTCAACATCAATCACGCGTT CTACCAGACCTTCGGCCGCGACACTTTCAACGGAATCACCGCCGCCCCGCAGCACATCAATGCGCAGCTGGCGGCATTCG AAATTGGCTACGAAAAGGATTGGATGGAGTTCAAGGCCTCGGCATTCTACACATCGGGTGACAGGAGCCTCAACGACGGC CAGGCCAACGGCTTCGATGGCATCGTGCCCAACCAGCAGTTCGCCGGCGGCGGCTTCCTCGGCAACCCGGCGCTCGCCGA TCGCGGCCTGCTCAACAATTCCTTCGTAGGCGGCGGCACAAATTTCCTGAATCGCGACCCCATCCCGCTTACCGGAACGG GCCTCGTGCTATTCGGCCCCAATAGCCTGATGCCCACCATGCGCGCCGGCCTGTTCGAGGGCCAGGCAAACTTCGTGAAC CCCGGCGTCCTGCTCTTCAACGCCGGACTCAATGCGAAGATCACGCCGAAGATCCGGGGCGCCGCCAACATAAACTGGGC GAAATTCAATCGCACCGAAGTCCTGGAAACCGTTCTGTACCAGAGCAACATCCACCACGCAATCGGCCTCGATACCGGCC TCGGCGTACAATACCGTCCGCTCCTGACCGACAACATCACCGTCACCGCCGGAGTCGGCACCCTCTTCCCCGGCCGCGGC TTCAAAGATATGTACACGGGGCAAACCCAATTCTCCGGCTTCGTCAACGTAAGGATGGTGTTCTGA
Upstream 100 bases:
>100_bases GGCCGGACGCCACCACGCCGCTCTATAACTATCTCGAGCACCCGTCGATGTATCGCCCCGCGGAATTCGCGGCCATTTTC CAAAAAGCTGCCGCAAACCA
Downstream 100 bases:
>100_bases TGGCTCATTCTTCTTGGCGCTACTTTGCGGCTTCGCGGCTTTGTGAGAAATTGACCTTCTCTCGCAGAGACGCAGAGCCG CAGAGTAACGCGGAGGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MRPILAILLLAVPVCAQRAQLPRKGRQPDTAEPVPVEPIRKLPRRVVITAAPPATPPAARPMQSPPPLSEDRVRSLLRGN ITPLETPPPSAELARTLPRIPPPLAGAAILPATVVAETVPSRWKIFPAPPWRRYDDKRLDAIYATSRYWDPFNRNTIKGD YPIYGRKVFFSFTGTTDTTYERRRVPVPSGASANDPGEFQFFGDGQQSIVQQNFRFSFDLFHGAAGFKPVDWELKVTPEF NMNYVNSRENGLIDINVLNGIDRTDSNVGFQELYFEKRIRTDKSYFDFTSVRAGIQRFTSDFRGFVFSDEQPGVRIFGTL HNNILQYNLAYFYMLEKDTNSGLNRWRLRQQQVAVANVYWSDFLTKGYTLNFSALYNHDQPSFLIDKNGFLVRPAPVGFP IPHQIAAGYAGISGDGHLGRFNINHAFYQTFGRDTFNGITAAPQHINAQLAAFEIGYEKDWMEFKASAFYTSGDRSLNDG QANGFDGIVPNQQFAGGGFLGNPALADRGLLNNSFVGGGTNFLNRDPIPLTGTGLVLFGPNSLMPTMRAGLFEGQANFVN PGVLLFNAGLNAKITPKIRGAANINWAKFNRTEVLETVLYQSNIHHAIGLDTGLGVQYRPLLTDNITVTAGVGTLFPGRG FKDMYTGQTQFSGFVNVRMVF
Sequences:
>Translated_661_residues MRPILAILLLAVPVCAQRAQLPRKGRQPDTAEPVPVEPIRKLPRRVVITAAPPATPPAARPMQSPPPLSEDRVRSLLRGN ITPLETPPPSAELARTLPRIPPPLAGAAILPATVVAETVPSRWKIFPAPPWRRYDDKRLDAIYATSRYWDPFNRNTIKGD YPIYGRKVFFSFTGTTDTTYERRRVPVPSGASANDPGEFQFFGDGQQSIVQQNFRFSFDLFHGAAGFKPVDWELKVTPEF NMNYVNSRENGLIDINVLNGIDRTDSNVGFQELYFEKRIRTDKSYFDFTSVRAGIQRFTSDFRGFVFSDEQPGVRIFGTL HNNILQYNLAYFYMLEKDTNSGLNRWRLRQQQVAVANVYWSDFLTKGYTLNFSALYNHDQPSFLIDKNGFLVRPAPVGFP IPHQIAAGYAGISGDGHLGRFNINHAFYQTFGRDTFNGITAAPQHINAQLAAFEIGYEKDWMEFKASAFYTSGDRSLNDG QANGFDGIVPNQQFAGGGFLGNPALADRGLLNNSFVGGGTNFLNRDPIPLTGTGLVLFGPNSLMPTMRAGLFEGQANFVN PGVLLFNAGLNAKITPKIRGAANINWAKFNRTEVLETVLYQSNIHHAIGLDTGLGVQYRPLLTDNITVTAGVGTLFPGRG FKDMYTGQTQFSGFVNVRMVF >Mature_661_residues MRPILAILLLAVPVCAQRAQLPRKGRQPDTAEPVPVEPIRKLPRRVVITAAPPATPPAARPMQSPPPLSEDRVRSLLRGN ITPLETPPPSAELARTLPRIPPPLAGAAILPATVVAETVPSRWKIFPAPPWRRYDDKRLDAIYATSRYWDPFNRNTIKGD YPIYGRKVFFSFTGTTDTTYERRRVPVPSGASANDPGEFQFFGDGQQSIVQQNFRFSFDLFHGAAGFKPVDWELKVTPEF NMNYVNSRENGLIDINVLNGIDRTDSNVGFQELYFEKRIRTDKSYFDFTSVRAGIQRFTSDFRGFVFSDEQPGVRIFGTL HNNILQYNLAYFYMLEKDTNSGLNRWRLRQQQVAVANVYWSDFLTKGYTLNFSALYNHDQPSFLIDKNGFLVRPAPVGFP IPHQIAAGYAGISGDGHLGRFNINHAFYQTFGRDTFNGITAAPQHINAQLAAFEIGYEKDWMEFKASAFYTSGDRSLNDG QANGFDGIVPNQQFAGGGFLGNPALADRGLLNNSFVGGGTNFLNRDPIPLTGTGLVLFGPNSLMPTMRAGLFEGQANFVN PGVLLFNAGLNAKITPKIRGAANINWAKFNRTEVLETVLYQSNIHHAIGLDTGLGVQYRPLLTDNITVTAGVGTLFPGRG FKDMYTGQTQFSGFVNVRMVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73476; Mature: 73476
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPILAILLLAVPVCAQRAQLPRKGRQPDTAEPVPVEPIRKLPRRVVITAAPPATPPAAR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCC PMQSPPPLSEDRVRSLLRGNITPLETPPPSAELARTLPRIPPPLAGAAILPATVVAETVP CCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC SRWKIFPAPPWRRYDDKRLDAIYATSRYWDPFNRNTIKGDYPIYGRKVFFSFTGTTDTTY CCCEEECCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCCCH ERRRVPVPSGASANDPGEFQFFGDGQQSIVQQNFRFSFDLFHGAAGFKPVDWELKVTPEF HHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCC NMNYVNSRENGLIDINVLNGIDRTDSNVGFQELYFEKRIRTDKSYFDFTSVRAGIQRFTS CCCEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH DFRGFVFSDEQPGVRIFGTLHNNILQYNLAYFYMLEKDTNSGLNRWRLRQQQVAVANVYW HHCCEEECCCCCCEEEEEEHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEHH SDFLTKGYTLNFSALYNHDQPSFLIDKNGFLVRPAPVGFPIPHQIAAGYAGISGDGHLGR HHHHCCCEEEEEEEEECCCCCCEEEECCCCEEECCCCCCCCCHHHHCCCCCCCCCCCEEE FNINHAFYQTFGRDTFNGITAAPQHINAQLAAFEIGYEKDWMEFKASAFYTSGDRSLNDG EECCHHHHHHHCCCCCCCCCCCCHHCCCEEEEEEECCCHHHHHHHHEEEEECCCCCCCCC QANGFDGIVPNQQFAGGGFLGNPALADRGLLNNSFVGGGTNFLNRDPIPLTGTGLVLFGP CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEECC NSLMPTMRAGLFEGQANFVNPGVLLFNAGLNAKITPKIRGAANINWAKFNRTEVLETVLY CCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCHHHCCHHHHHHHHHH QSNIHHAIGLDTGLGVQYRPLLTDNITVTAGVGTLFPGRGFKDMYTGQTQFSGFVNVRMV HCCCCCEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEEEEE F C >Mature Secondary Structure MRPILAILLLAVPVCAQRAQLPRKGRQPDTAEPVPVEPIRKLPRRVVITAAPPATPPAAR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCC PMQSPPPLSEDRVRSLLRGNITPLETPPPSAELARTLPRIPPPLAGAAILPATVVAETVP CCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC SRWKIFPAPPWRRYDDKRLDAIYATSRYWDPFNRNTIKGDYPIYGRKVFFSFTGTTDTTY CCCEEECCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCCCH ERRRVPVPSGASANDPGEFQFFGDGQQSIVQQNFRFSFDLFHGAAGFKPVDWELKVTPEF HHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCC NMNYVNSRENGLIDINVLNGIDRTDSNVGFQELYFEKRIRTDKSYFDFTSVRAGIQRFTS CCCEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH DFRGFVFSDEQPGVRIFGTLHNNILQYNLAYFYMLEKDTNSGLNRWRLRQQQVAVANVYW HHCCEEECCCCCCEEEEEEHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEHH SDFLTKGYTLNFSALYNHDQPSFLIDKNGFLVRPAPVGFPIPHQIAAGYAGISGDGHLGR HHHHCCCEEEEEEEEECCCCCCEEEECCCCEEECCCCCCCCCHHHHCCCCCCCCCCCEEE FNINHAFYQTFGRDTFNGITAAPQHINAQLAAFEIGYEKDWMEFKASAFYTSGDRSLNDG EECCHHHHHHHCCCCCCCCCCCCHHCCCEEEEEEECCCHHHHHHHHEEEEECCCCCCCCC QANGFDGIVPNQQFAGGGFLGNPALADRGLLNNSFVGGGTNFLNRDPIPLTGTGLVLFGP CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEECC NSLMPTMRAGLFEGQANFVNPGVLLFNAGLNAKITPKIRGAANINWAKFNRTEVLETVLY CCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCHHHCCHHHHHHHHHH QSNIHHAIGLDTGLGVQYRPLLTDNITVTAGVGTLFPGRGFKDMYTGQTQFSGFVNVRMV HCCCCCEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEEEEE F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA